BLASTX nr result

ID: Cnidium21_contig00026133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026133
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucu...   190   3e-46
emb|CBI26288.3| unnamed protein product [Vitis vinifera]              187   2e-45
ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]          181   2e-43
ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
dbj|BAD38576.1| unknown protein [Oryza sativa Japonica Group] gi...   180   3e-43

>ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
           gi|449432682|ref|XP_004134128.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
           gi|449504162|ref|XP_004162269.1| PREDICTED: protein
           RDM1-like isoform 1 [Cucumis sativus]
           gi|449504166|ref|XP_004162270.1| PREDICTED: protein
           RDM1-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  190 bits (482), Expect = 3e-46
 Identities = 90/160 (56%), Positives = 115/160 (71%), Gaps = 3/160 (1%)
 Frame = -1

Query: 715 VDISSDDSCSAGDDTGDRSNKRSRHDGAIDK---PFRELTCEGTIIRRAEMYQEYMKQLP 545
           VDI S    S+ D      N       ++D    P +E+T EG +++RAEMYQEYMKQ+ 
Sbjct: 11  VDIISSGESSSSDSEAAIQNDGYEFKPSLDDFKIPAKEMTSEGMLMKRAEMYQEYMKQIQ 70

Query: 544 IPTNRPSVIPCTTWQGLAKSIKLLYGQPLHYLTNICLKKWDQLRMGSEYEHQPLDTIVHP 365
           IP  R SVIP TTW GL KSIK LYGQPLHYLTNI LK+WDQLR+GS  E++PLDT++HP
Sbjct: 71  IPAQRGSVIPFTTWMGLGKSIKQLYGQPLHYLTNILLKQWDQLRLGSADEYKPLDTVIHP 130

Query: 364 SKAEISIWCIEEVHRLTTSHQNLSKLWLADPTCNAYIDRI 245
           SKAE ++W +EE+HR T+SH +++KLWL+DP   AY+D I
Sbjct: 131 SKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMHQAYVDSI 170


>emb|CBI26288.3| unnamed protein product [Vitis vinifera]
          Length = 174

 Score =  187 bits (475), Expect = 2e-45
 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 2/157 (1%)
 Frame = -1

Query: 709 ISSDDSCSA--GDDTGDRSNKRSRHDGAIDKPFRELTCEGTIIRRAEMYQEYMKQLPIPT 536
           ISSD+S S+  G +  + S  +   D  ID+P R+   E  +IRRAEMYQEYMKQ+PIP 
Sbjct: 14  ISSDESSSSNPGVEVDNGSVDKKSMDITIDQPARQEPFEDVVIRRAEMYQEYMKQIPIPA 73

Query: 535 NRPSVIPCTTWQGLAKSIKLLYGQPLHYLTNICLKKWDQLRMGSEYEHQPLDTIVHPSKA 356
            R S+IP  TW GLAKSIK LYGQPLHYLTNI +K+WDQLR+GS+ E++ LD+I+HPSKA
Sbjct: 74  RRGSLIPFDTWMGLAKSIKQLYGQPLHYLTNILVKQWDQLRIGSKDENRSLDSIIHPSKA 133

Query: 355 EISIWCIEEVHRLTTSHQNLSKLWLADPTCNAYIDRI 245
           E SIW IEEVHR TTS  +++KLWL+DP   A++D I
Sbjct: 134 EASIWLIEEVHRQTTSPHHMAKLWLSDPMHYAFVDSI 170


>ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
          Length = 137

 Score =  181 bits (458), Expect = 2e-43
 Identities = 86/132 (65%), Positives = 105/132 (79%)
 Frame = -1

Query: 640 DGAIDKPFRELTCEGTIIRRAEMYQEYMKQLPIPTNRPSVIPCTTWQGLAKSIKLLYGQP 461
           D  ID+P R+   E  +IRRAEMYQEYMKQ+PIP  R S+IP  TW GLAKSIK LYGQP
Sbjct: 2   DITIDQPARQEPFEDVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQP 61

Query: 460 LHYLTNICLKKWDQLRMGSEYEHQPLDTIVHPSKAEISIWCIEEVHRLTTSHQNLSKLWL 281
           LHYLTNI +K+WDQLR+GS+ E++ LD+I+HPSKAE SIW IEEVHR TTS  +++KLWL
Sbjct: 62  LHYLTNILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWL 121

Query: 280 ADPTCNAYIDRI 245
           +DP   A++D I
Sbjct: 122 SDPMHYAFVDSI 133


>ref|XP_002311634.1| predicted protein [Populus trichocarpa] gi|222851454|gb|EEE89001.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  181 bits (458), Expect = 2e-43
 Identities = 86/158 (54%), Positives = 112/158 (70%), Gaps = 3/158 (1%)
 Frame = -1

Query: 709 ISSDDSCSAGDD---TGDRSNKRSRHDGAIDKPFRELTCEGTIIRRAEMYQEYMKQLPIP 539
           ISSD+S S+  D         +R  +   ID+P +E T EG +IRRAEMYQ+YM+ +PIP
Sbjct: 14  ISSDESSSSDSDIELNDGLDGQRLSNYVTIDQPIKETTSEGVLIRRAEMYQDYMRHIPIP 73

Query: 538 TNRPSVIPCTTWQGLAKSIKLLYGQPLHYLTNICLKKWDQLRMGSEYEHQPLDTIVHPSK 359
             R S IP ++W GL KSIK LY QPLHYLTNI L KWDQ R+GSE EH PLD ++HP K
Sbjct: 74  VQRGSAIPFSSWAGLGKSIKQLYQQPLHYLTNILLNKWDQQRIGSEDEHTPLDIMIHPCK 133

Query: 358 AEISIWCIEEVHRLTTSHQNLSKLWLADPTCNAYIDRI 245
           AE +IW +EEVHR T+SH +++K+W +DP  +A++D I
Sbjct: 134 AEATIWLVEEVHRRTSSHHHVAKIWQSDPMHHAFVDSI 171


>dbj|BAD38576.1| unknown protein [Oryza sativa Japonica Group]
           gi|51535714|dbj|BAD37732.1| unknown protein [Oryza
           sativa Japonica Group] gi|215701196|dbj|BAG92620.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 173

 Score =  180 bits (456), Expect = 3e-43
 Identities = 88/159 (55%), Positives = 115/159 (72%), Gaps = 2/159 (1%)
 Frame = -1

Query: 715 VDISSDDSCSAGDDTGDRSNKRSRHDGAIDKP--FRELTCEGTIIRRAEMYQEYMKQLPI 542
           +++SSDDS S+  D+ D + K  + D A   P   +    +G +IR+AEMYQEYMK +P+
Sbjct: 11  LEVSSDDSLSS--DSDDEAGK-GKGDNAFGLPNSTKAAAPDGALIRKAEMYQEYMKHIPV 67

Query: 541 PTNRPSVIPCTTWQGLAKSIKLLYGQPLHYLTNICLKKWDQLRMGSEYEHQPLDTIVHPS 362
           P +R SVIPCTTW GL +S+K LY QPLHYLTN+ LK+WDQ R+GS+ EH+PLD I+HP 
Sbjct: 68  PAHRGSVIPCTTWLGLGRSVKQLYKQPLHYLTNVLLKQWDQQRVGSDDEHRPLDAIIHPV 127

Query: 361 KAEISIWCIEEVHRLTTSHQNLSKLWLADPTCNAYIDRI 245
           KAE  IW  EEVHRLTTS Q+L+ LW + P  +AYID +
Sbjct: 128 KAEALIWITEEVHRLTTSSQHLASLWASAPMYHAYIDPV 166


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