BLASTX nr result

ID: Cnidium21_contig00026123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026123
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   369   e-100
emb|CBI27579.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinu...   368   e-100
ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|2...   367   2e-99
ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-l...   363   2e-98

>ref|XP_002266642.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Vitis vinifera]
          Length = 700

 Score =  369 bits (947), Expect = e-100
 Identities = 190/244 (77%), Positives = 209/244 (85%)
 Frame = -1

Query: 733 VEHNPVVVIIGETGSGKSTQLSQILHRSGYSNSGLIAVTQPXXXXXXXXXXXXSXXXXXX 554
           VE N VVVIIGETGSGKSTQLSQIL+R GY+NSG +AVTQP            +      
Sbjct: 17  VEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQPRRVAAVSVARRVAQELGVQ 76

Query: 553 XXXXXGYSIRFEDRTSEKTRIKYLTDGVLLRESLSNPQLNQYSVIILDEAHERSLNTDIL 374
                GY+IRFEDRTSE+TRIKYLTDGVLLRESLSNP L+QYSVIILDEAHERSLNTDIL
Sbjct: 77  LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSNPDLSQYSVIILDEAHERSLNTDIL 136

Query: 373 LGLMKRLIKLRASNLKVLITSATLDGEKVSKFFCDCPILNVPGKLFPVEILYSSERPKSY 194
           LGLMKRL+K+RASNLKVLITSATLDG KVS+FF +CPIL VPGKLFPVEILYS+E PKSY
Sbjct: 137 LGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLFPVEILYSAELPKSY 196

Query: 193 LDSCLRVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKIRSLEEGSCMDAIVLPLHGS 14
           ++S L+ AIDIHVREPEGD+LIFMTGQDDIEKLV KLEE++RSLEEGSCMDAI+LPLHGS
Sbjct: 197 IESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVVKLEERVRSLEEGSCMDAIILPLHGS 256

Query: 13  LPPE 2
           LPPE
Sbjct: 257 LPPE 260


>emb|CBI27579.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  369 bits (947), Expect = e-100
 Identities = 190/244 (77%), Positives = 209/244 (85%)
 Frame = -1

Query: 733 VEHNPVVVIIGETGSGKSTQLSQILHRSGYSNSGLIAVTQPXXXXXXXXXXXXSXXXXXX 554
           VE N VVVIIGETGSGKSTQLSQIL+R GY+NSG +AVTQP            +      
Sbjct: 17  VEQNSVVVIIGETGSGKSTQLSQILYRRGYTNSGNVAVTQPRRVAAVSVARRVAQELGVQ 76

Query: 553 XXXXXGYSIRFEDRTSEKTRIKYLTDGVLLRESLSNPQLNQYSVIILDEAHERSLNTDIL 374
                GY+IRFEDRTSE+TRIKYLTDGVLLRESLSNP L+QYSVIILDEAHERSLNTDIL
Sbjct: 77  LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSNPDLSQYSVIILDEAHERSLNTDIL 136

Query: 373 LGLMKRLIKLRASNLKVLITSATLDGEKVSKFFCDCPILNVPGKLFPVEILYSSERPKSY 194
           LGLMKRL+K+RASNLKVLITSATLDG KVS+FF +CPIL VPGKLFPVEILYS+E PKSY
Sbjct: 137 LGLMKRLVKMRASNLKVLITSATLDGSKVSRFFSNCPILTVPGKLFPVEILYSAELPKSY 196

Query: 193 LDSCLRVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKIRSLEEGSCMDAIVLPLHGS 14
           ++S L+ AIDIHVREPEGD+LIFMTGQDDIEKLV KLEE++RSLEEGSCMDAI+LPLHGS
Sbjct: 197 IESSLKTAIDIHVREPEGDVLIFMTGQDDIEKLVVKLEERVRSLEEGSCMDAIILPLHGS 256

Query: 13  LPPE 2
           LPPE
Sbjct: 257 LPPE 260


>ref|XP_002514958.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546009|gb|EEF47512.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 702

 Score =  368 bits (944), Expect = e-100
 Identities = 187/244 (76%), Positives = 207/244 (84%)
 Frame = -1

Query: 733 VEHNPVVVIIGETGSGKSTQLSQILHRSGYSNSGLIAVTQPXXXXXXXXXXXXSXXXXXX 554
           VE NPVVVIIGETGSGKSTQLSQ+LHR GY+ SG+I +TQP            +      
Sbjct: 17  VEENPVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGITQPRRVAAVSVARRVAQELGVT 76

Query: 553 XXXXXGYSIRFEDRTSEKTRIKYLTDGVLLRESLSNPQLNQYSVIILDEAHERSLNTDIL 374
                GY+IRFEDRTSE TRIKYLTDGVLLRESLS P+LNQYSVIILDEAHERSLNTD+L
Sbjct: 77  LGEEVGYAIRFEDRTSELTRIKYLTDGVLLRESLSGPELNQYSVIILDEAHERSLNTDVL 136

Query: 373 LGLMKRLIKLRASNLKVLITSATLDGEKVSKFFCDCPILNVPGKLFPVEILYSSERPKSY 194
           LGL+KRL+KLRASNLKVLITSATLDGEKVS+FF  CPILNVPGKL+PVEI+YS ERP SY
Sbjct: 137 LGLVKRLVKLRASNLKVLITSATLDGEKVSEFFSGCPILNVPGKLYPVEIMYSKERPTSY 196

Query: 193 LDSCLRVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKIRSLEEGSCMDAIVLPLHGS 14
           ++S L+ AIDIH REPEGDILIFMTGQDDIEKLV KLE++IRSLEEGSCMDAI+LPLHGS
Sbjct: 197 IESALKTAIDIHTREPEGDILIFMTGQDDIEKLVMKLEDRIRSLEEGSCMDAIILPLHGS 256

Query: 13  LPPE 2
           LPP+
Sbjct: 257 LPPD 260


>ref|XP_002314547.1| predicted protein [Populus trichocarpa] gi|222863587|gb|EEF00718.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  367 bits (941), Expect = 2e-99
 Identities = 185/244 (75%), Positives = 209/244 (85%)
 Frame = -1

Query: 733 VEHNPVVVIIGETGSGKSTQLSQILHRSGYSNSGLIAVTQPXXXXXXXXXXXXSXXXXXX 554
           VE N VVVIIGETGSGKSTQLSQ+LHR GY+ SG+IAVTQP            +      
Sbjct: 18  VEDNAVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIAVTQPRRVAAVSVARRVAQELGVT 77

Query: 553 XXXXXGYSIRFEDRTSEKTRIKYLTDGVLLRESLSNPQLNQYSVIILDEAHERSLNTDIL 374
                GY+IRFEDRTS+ TRIKYLTDGVLLRE LSNP+LNQYSVIILDEAHERSLNTDIL
Sbjct: 78  LGEEVGYAIRFEDRTSDLTRIKYLTDGVLLRECLSNPELNQYSVIILDEAHERSLNTDIL 137

Query: 373 LGLMKRLIKLRASNLKVLITSATLDGEKVSKFFCDCPILNVPGKLFPVEILYSSERPKSY 194
           +GL+KRL+K+RAS LKVLITSATLDGEKVS+FF DCP+LNVPGKL+PVEILYS ERPKSY
Sbjct: 138 MGLVKRLVKMRASKLKVLITSATLDGEKVSEFFSDCPVLNVPGKLYPVEILYSEERPKSY 197

Query: 193 LDSCLRVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKIRSLEEGSCMDAIVLPLHGS 14
           ++S  R A+DIHVREPEGD+LIFMTGQDDI+KLVSKLE++++SLEEGSCMDAI+LPLHGS
Sbjct: 198 IESSFRTAMDIHVREPEGDVLIFMTGQDDIDKLVSKLEDRVQSLEEGSCMDAIILPLHGS 257

Query: 13  LPPE 2
           LPPE
Sbjct: 258 LPPE 261


>ref|XP_004143044.1| PREDICTED: ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
           gi|449494554|ref|XP_004159579.1| PREDICTED:
           ATP-dependent RNA helicase dhx8-like [Cucumis sativus]
          Length = 702

 Score =  363 bits (932), Expect = 2e-98
 Identities = 184/244 (75%), Positives = 207/244 (84%)
 Frame = -1

Query: 733 VEHNPVVVIIGETGSGKSTQLSQILHRSGYSNSGLIAVTQPXXXXXXXXXXXXSXXXXXX 554
           VE N VVVIIGETGSGKSTQLSQ+LHR GY+ SG+I VTQP            +      
Sbjct: 17  VEQNQVVVIIGETGSGKSTQLSQMLHRRGYTKSGIIGVTQPRRVAAVSVARRVAEELGVH 76

Query: 553 XXXXXGYSIRFEDRTSEKTRIKYLTDGVLLRESLSNPQLNQYSVIILDEAHERSLNTDIL 374
                GY+IRFEDRTSE+TRIKYLTDGVLLRESLS+P+L QYSVIILDEAHERSLNTD L
Sbjct: 77  LGEEVGYAIRFEDRTSERTRIKYLTDGVLLRESLSDPELGQYSVIILDEAHERSLNTDTL 136

Query: 373 LGLMKRLIKLRASNLKVLITSATLDGEKVSKFFCDCPILNVPGKLFPVEILYSSERPKSY 194
           +GLMKRLI++R S+LKVLITSATLDG+KVSKFF DCP+L VPGKL PVEILYS+ERPKSY
Sbjct: 137 MGLMKRLIRMRNSHLKVLITSATLDGDKVSKFFFDCPVLTVPGKLHPVEILYSNERPKSY 196

Query: 193 LDSCLRVAIDIHVREPEGDILIFMTGQDDIEKLVSKLEEKIRSLEEGSCMDAIVLPLHGS 14
           ++SCL+ AIDIH +EPEGD+LIF+TGQDDIEKLVSKLEEK+ SLEEGSCMDAI+LPLHGS
Sbjct: 197 IESCLKTAIDIHTKEPEGDVLIFLTGQDDIEKLVSKLEEKVYSLEEGSCMDAIILPLHGS 256

Query: 13  LPPE 2
           LPPE
Sbjct: 257 LPPE 260


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