BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026070
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   202   2e-50
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   187   8e-46
ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containi...   181   6e-44
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   181   6e-44
ref|XP_002512699.1| pentatricopeptide repeat-containing protein,...   171   6e-41

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/156 (65%), Positives = 125/156 (80%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V SAL+E+YGRL GA AAK VF KS   +++VSWTL+++LY+ EDKP LA+++F +MV S
Sbjct: 130 VISALLEMYGRLDGANAAKLVFCKS-ARRNSVSWTLISRLYIMEDKPGLAVDMFKQMVES 188

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
            +EID L++ TAI  CG+LKSLQEGR VH IAK C LE DVLVSNSLLKMYIDCGSI++A
Sbjct: 189 KSEIDPLALVTAIVACGMLKSLQEGRYVHEIAKKCGLEADVLVSNSLLKMYIDCGSIKDA 248

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           R VFD+M  +D ISWT +  GYV+ G FNEGLKLFR
Sbjct: 249 RAVFDRMPSKDVISWTEIFRGYVKNGGFNEGLKLFR 284



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 52/156 (33%), Positives = 88/156 (56%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V ++L+++Y      + A+ VFD+ P +K  +SWT + + YVK    N  ++LF +M   
Sbjct: 231 VSNSLLKMYIDCGSIKDARAVFDRMP-SKDVISWTEIFRGYVKNGGFNEGLKLFRQMSME 289

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
             + DSL++++ +  CG   + ++G+ +H       ++ +V V N++L MY+  G I  A
Sbjct: 290 GVKPDSLAISSILPACGRGAAHKQGKEIHAYLLRNGIDLNVTVQNAVLDMYVKSGFIESA 349

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
             +F  MK RD ISWT M+ GY   G+   G+ LFR
Sbjct: 350 AKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFR 385


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
           predicted protein [Populus trichocarpa]
          Length = 663

 Score =  187 bits (475), Expect = 8e-46
 Identities = 92/156 (58%), Positives = 120/156 (76%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V +ALIE+YGRL G EA KW+FDKSP  +++V+WT++ KLY+ E+KP+LAI +F +MV  
Sbjct: 131 VITALIEIYGRLDGIEAGKWLFDKSP-RRNSVAWTMILKLYLMENKPDLAINVFYQMVEL 189

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
           NA IDS+ + TA G CGLLKS++ GR VH +A+   LE D+LVSNSLLKM IDC  + +A
Sbjct: 190 NARIDSVVLITAAGACGLLKSVEHGRRVHDVARKFRLESDILVSNSLLKMQIDCQRMEDA 249

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           R  F+QM  +D ISWT ++ GYV+KGEFNE LKLFR
Sbjct: 250 RGFFNQMTTKDVISWTEIICGYVKKGEFNEALKLFR 285



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/155 (30%), Positives = 85/155 (54%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V ++L+++       E A+  F++    K  +SWT +   YVK+ + N A++LF +M   
Sbjct: 232 VSNSLLKMQIDCQRMEDARGFFNQM-TTKDVISWTEIICGYVKKGEFNEALKLFRKMNMD 290

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
             + DSLSV++ +  C    + + G+ +H  +    ++ +++V N+   MY   G +  A
Sbjct: 291 GIKPDSLSVSSVLPACARTVAHKNGKEIHGYSLRNGMDNNLIVQNATTDMYAKSGLVDYA 350

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLF 465
             VF++MK RD ISWT M+ G+   G+   G++LF
Sbjct: 351 LKVFERMKKRDVISWTVMILGFSLHGKGELGVELF 385


>ref|XP_004160350.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 429

 Score =  181 bits (459), Expect = 6e-44
 Identities = 90/156 (57%), Positives = 120/156 (76%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V ++LIELYG L  A+ AKW+ DKS   +++VSWT+LAKLY++EDKP+LA++LF +MV  
Sbjct: 96  VLTSLIELYGILDSADTAKWLHDKS-TCRNSVSWTVLAKLYLREDKPSLALDLFYQMVEL 154

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
             +ID++++ATAIG CG LK L  GRN+H +A+   LEF++LVSNSLLKMYIDC SI++A
Sbjct: 155 ADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDA 214

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           R  FDQM  +D ISWT ++  YV+KG  NE  KLFR
Sbjct: 215 RGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFR 250



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEM-VR 177
           V ++L+++Y      + A+  FD+ P +K  +SWT L  +YVK+   N A +LF +M + 
Sbjct: 197 VSNSLLKMYIDCDSIKDARGFFDQMP-SKDIISWTELIHMYVKKGGINEAFKLFRQMNMD 255

Query: 178 SNAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIRE 357
              + D  ++++ +  CG + + + G+ +H        + +++V N+L+ MY+  G I+ 
Sbjct: 256 GELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQS 315

Query: 358 ARLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           A   F  MK +D +SW+ M  GY   G+   G+ LFR
Sbjct: 316 ASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFR 352


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  181 bits (459), Expect = 6e-44
 Identities = 90/156 (57%), Positives = 120/156 (76%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V ++LIELYG L  A+ AKW+ DKS   +++VSWT+LAKLY++EDKP+LA++LF +MV  
Sbjct: 96  VLTSLIELYGILDSADTAKWLHDKS-TCRNSVSWTVLAKLYLREDKPSLALDLFYQMVEL 154

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
             +ID++++ATAIG CG LK L  GRN+H +A+   LEF++LVSNSLLKMYIDC SI++A
Sbjct: 155 ADDIDAVALATAIGACGALKMLHHGRNIHHLARVHGLEFNILVSNSLLKMYIDCDSIKDA 214

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           R  FDQM  +D ISWT ++  YV+KG  NE  KLFR
Sbjct: 215 RGFFDQMPSKDIISWTELIHMYVKKGGINEAFKLFR 250



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/157 (29%), Positives = 86/157 (54%), Gaps = 1/157 (0%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEM-VR 177
           V ++L+++Y      + A+  FD+ P +K  +SWT L  +YVK+   N A +LF +M + 
Sbjct: 197 VSNSLLKMYIDCDSIKDARGFFDQMP-SKDIISWTELIHMYVKKGGINEAFKLFRQMNMD 255

Query: 178 SNAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIRE 357
              + D  ++++ +  CG + + + G+ +H        + +++V N+L+ MY+  G I+ 
Sbjct: 256 GELKPDPRTISSILPACGRMAAHKHGKEIHGYVVKNAFDENLIVQNALVDMYVKSGCIQS 315

Query: 358 ARLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           A   F  MK +D +SW+ M  GY   G+   G+ LFR
Sbjct: 316 ASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFR 352


>ref|XP_002512699.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548660|gb|EEF50151.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 686

 Score =  171 bits (433), Expect = 6e-41
 Identities = 81/156 (51%), Positives = 117/156 (75%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V S+LI+ YG L   +AA+ +FD SP +K++VSWT+LA+LY+ ++KP++ + LF +M+  
Sbjct: 134 VISSLIDFYGHLDSTDAARSLFDNSP-SKNSVSWTVLARLYLMQNKPDVVLSLFYQMLDF 192

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
           N+  D +++ATA+  CG+L+S+  G+ +H  AK C LEFD+LVSNSLLKMY+DC  I +A
Sbjct: 193 NSLFDPVALATALRACGMLRSMHHGKILHGFAKKCRLEFDILVSNSLLKMYVDCHCIEDA 252

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
           R  F QM  +D ISWT +++GYV+ GEFNE LKLFR
Sbjct: 253 RATFHQMPTKDIISWTEIINGYVKIGEFNEALKLFR 288



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 51/156 (32%), Positives = 88/156 (56%)
 Frame = +1

Query: 1   VHSALIELYGRLVGAEAAKWVFDKSPVAKSTVSWTLLAKLYVKEDKPNLAIELFNEMVRS 180
           V ++L+++Y      E A+  F + P  K  +SWT +   YVK  + N A++LF +M  +
Sbjct: 235 VSNSLLKMYVDCHCIEDARATFHQMPT-KDIISWTEIINGYVKIGEFNEALKLFRQMNIA 293

Query: 181 NAEIDSLSVATAIGTCGLLKSLQEGRNVHRIAKSCELEFDVLVSNSLLKMYIDCGSIREA 360
               DSLS++T +  C    + + GR +H       +E ++++ N+L+ MY+  G +  A
Sbjct: 294 GIRPDSLSLSTILPACARPAAHKLGREIHAYLLRNGIELNLMLQNALIDMYVKSGFMESA 353

Query: 361 RLVFDQMKLRDEISWTAMVSGYVQKGEFNEGLKLFR 468
            L+F +MK +D ISWT M+ G+   G+   G++LFR
Sbjct: 354 SLIFVRMKEKDVISWTVMILGFSLHGQGELGVELFR 389