BLASTX nr result

ID: Cnidium21_contig00026049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026049
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]      85   7e-15
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G...    55   6e-06
gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indi...    55   6e-06
gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japoni...    55   6e-06
ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    55   8e-06

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/98 (51%), Positives = 63/98 (64%), Gaps = 4/98 (4%)
 Frame = -1

Query: 285 VMRGLRVKIDKFIVGLEPENLKMAQLNLARSYRRQSCA----RKESPMMQRIFHTVDKVV 118
           VMRGLR KIDK ++GL+P  L  AQ  LA  Y+ Q       +   P+    F   ++V+
Sbjct: 183 VMRGLREKIDK-LIGLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSF-LQEQVM 240

Query: 117 VVPHKFEGLFITKGLGKKNFICTKNLVPGKVLYGEKLI 4
           VVPH+FEG F  KG  KKN +CT+NLVPG+ LYGEKLI
Sbjct: 241 VVPHRFEGFFNAKG--KKNILCTRNLVPGEALYGEKLI 276


>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
           gi|222630379|gb|EEE62511.1| hypothetical protein
           OsJ_17309 [Oryza sativa Japonica Group]
          Length = 309

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -1

Query: 126 KVVVVPHKFEGLFITKGLGKKNFICTKNLVPGKVLYGEKLIS 1
           KVVVVPHK +G+FI K   K++ +CTKN+VPG+ +YGEK IS
Sbjct: 70  KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRIS 109


>gb|EAY96730.1| hypothetical protein OsI_18646 [Oryza sativa Indica Group]
          Length = 269

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -1

Query: 126 KVVVVPHKFEGLFITKGLGKKNFICTKNLVPGKVLYGEKLIS 1
           KVVVVPHK +G+FI K   K++ +CTKN+VPG+ +YGEK IS
Sbjct: 53  KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRIS 92


>gb|AAT77341.1| putative fibrillarin protein [Oryza sativa Japonica Group]
           gi|52353729|gb|AAU44295.1| putative fibrillarin [Oryza
           sativa Japonica Group]
          Length = 351

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = -1

Query: 126 KVVVVPHKFEGLFITKGLGKKNFICTKNLVPGKVLYGEKLIS 1
           KVVVVPHK +G+FI K   K++ +CTKN+VPG+ +YGEK IS
Sbjct: 70  KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRIS 109


>ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
           [Brachypodium distachyon]
          Length = 302

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/42 (59%), Positives = 34/42 (80%)
 Frame = -1

Query: 126 KVVVVPHKFEGLFITKGLGKKNFICTKNLVPGKVLYGEKLIS 1
           KVVVVPHK +G+FI K   K++ +CTKN+VPG+ +YGEK +S
Sbjct: 64  KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRVS 103


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