BLASTX nr result

ID: Cnidium21_contig00026015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026015
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM95643.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] gi|...   216   2e-54
ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|2...   211   7e-53
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   210   1e-52
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|XP_002512788.1| WD-repeat protein, putative [Ricinus communi...   209   2e-52

>gb|AAM95643.1| WD-repeat protein GhTTG2 [Gossypium hirsutum]
           gi|22324805|gb|AAM95644.1| WD-repeat protein GhTTG2
           [Gossypium hirsutum]
          Length = 346

 Score =  216 bits (549), Expect = 2e-54
 Identities = 98/138 (71%), Positives = 118/138 (85%)
 Frame = +1

Query: 124 EIYTYEAPWHVYAINWSVRRDKPYRLAISSLVEHYHNQVQIVHLDELVGEIKPDPGLCFL 303
           EIYTYEAPWH+YA+NWSVRRDK YRLAI+SL+EHY+N+++IV LD+  GEI+ DP L F 
Sbjct: 20  EIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEHYNNRLEIVQLDDSNGEIRSDPNLSFD 79

Query: 304 HPYPPTKTIFIPDPECQKPDLFATSSDFLRIWEVKSDSGPGRVDLKSVLDGNRSSGYCGA 483
           HPYPPTKTIFIPD ECQKPDL ATSSDFLRIW +  D    RVDLKS+L+GN++S +CG 
Sbjct: 80  HPYPPTKTIFIPDKECQKPDLLATSSDFLRIWRISDDH--SRVDLKSLLNGNKNSEFCGP 137

Query: 484 LTSFDWNESDPGRVGSSS 537
           LTSFDWNE++P R+G+SS
Sbjct: 138 LTSFDWNEAEPKRIGTSS 155


>ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|222843290|gb|EEE80837.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  211 bits (536), Expect = 7e-53
 Identities = 98/138 (71%), Positives = 118/138 (85%)
 Frame = +1

Query: 124 EIYTYEAPWHVYAINWSVRRDKPYRLAISSLVEHYHNQVQIVHLDELVGEIKPDPGLCFL 303
           EIYTYEAPWH+YA+NWSVRRDK YRLAI+SL+E Y N+V+IV LDE  GEI+ DP L F 
Sbjct: 20  EIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDESNGEIRSDPNLSFE 79

Query: 304 HPYPPTKTIFIPDPECQKPDLFATSSDFLRIWEVKSDSGPGRVDLKSVLDGNRSSGYCGA 483
           HPYPPTKTIFIPD ECQKPDL ATSSDFLR+W + +D  P RV+LKS+L+GN++S +CG 
Sbjct: 80  HPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRI-NDEQP-RVELKSLLNGNKNSEFCGP 137

Query: 484 LTSFDWNESDPGRVGSSS 537
           LTSFDWNE++P R+G+SS
Sbjct: 138 LTSFDWNEAEPRRIGTSS 155


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
           gi|449501305|ref|XP_004161333.1| PREDICTED: WD
           repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  210 bits (534), Expect = 1e-52
 Identities = 94/138 (68%), Positives = 116/138 (84%)
 Frame = +1

Query: 124 EIYTYEAPWHVYAINWSVRRDKPYRLAISSLVEHYHNQVQIVHLDELVGEIKPDPGLCFL 303
           EIYTYEAPWH+YA+NWSVRRDK YRLAI+SL+E Y N+V+IV LD+  GEI+ DP L F 
Sbjct: 20  EIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSSGEIRSDPNLSFE 79

Query: 304 HPYPPTKTIFIPDPECQKPDLFATSSDFLRIWEVKSDSGPGRVDLKSVLDGNRSSGYCGA 483
           HPYPPTKTIFIPD ECQ+PDL ATSSDFLR+W +  D  P  V+LKS+L+GN++S +CG 
Sbjct: 80  HPYPPTKTIFIPDKECQRPDLLATSSDFLRVWRISDD--PSSVELKSLLNGNKNSEFCGP 137

Query: 484 LTSFDWNESDPGRVGSSS 537
           LTSFDWN+++P R+G+SS
Sbjct: 138 LTSFDWNDAEPKRIGTSS 155


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
           gi|224131364|ref|XP_002321066.1| predicted protein
           [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
           predicted protein [Populus trichocarpa]
           gi|222870324|gb|EEF07455.1| predicted protein [Populus
           trichocarpa]
          Length = 346

 Score =  209 bits (533), Expect = 2e-52
 Identities = 97/138 (70%), Positives = 118/138 (85%)
 Frame = +1

Query: 124 EIYTYEAPWHVYAINWSVRRDKPYRLAISSLVEHYHNQVQIVHLDELVGEIKPDPGLCFL 303
           EIYTYEAPWH+YA+NWSVRRDK YRLAI+SL+E Y N+V+IV LD+  GEI+ DP L F 
Sbjct: 20  EIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPNLSFE 79

Query: 304 HPYPPTKTIFIPDPECQKPDLFATSSDFLRIWEVKSDSGPGRVDLKSVLDGNRSSGYCGA 483
           HPYPPTKTIFIPD ECQKPDL ATSSDFLR+W + +D  P RV+LKS+L+GN++S +CG 
Sbjct: 80  HPYPPTKTIFIPDKECQKPDLLATSSDFLRVWRI-NDEQP-RVELKSLLNGNKNSEFCGP 137

Query: 484 LTSFDWNESDPGRVGSSS 537
           LTSFDWNE++P R+G+SS
Sbjct: 138 LTSFDWNEAEPRRIGTSS 155


>ref|XP_002512788.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547799|gb|EEF49291.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 346

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/138 (69%), Positives = 116/138 (84%)
 Frame = +1

Query: 124 EIYTYEAPWHVYAINWSVRRDKPYRLAISSLVEHYHNQVQIVHLDELVGEIKPDPGLCFL 303
           EIYTYEAPWH+YA+NWSVRRDK YRLAI+SL+E Y N+V+IV LD+  GEI+ DP L F 
Sbjct: 20  EIYTYEAPWHIYAMNWSVRRDKKYRLAIASLLEQYPNRVEIVQLDDSNGEIRSDPNLSFE 79

Query: 304 HPYPPTKTIFIPDPECQKPDLFATSSDFLRIWEVKSDSGPGRVDLKSVLDGNRSSGYCGA 483
           HPYPPTKT+FIPD ECQK DL ATSSDFLR+W + +D    RV+LKSVL+GN+SS +CG 
Sbjct: 80  HPYPPTKTMFIPDKECQKADLLATSSDFLRVWRIDNDH--SRVELKSVLNGNKSSEFCGP 137

Query: 484 LTSFDWNESDPGRVGSSS 537
           LTSFDWNE++P R+G+SS
Sbjct: 138 LTSFDWNEAEPKRIGTSS 155


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