BLASTX nr result

ID: Cnidium21_contig00026013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026013
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD30073.1| arabinofuranosidase [Daucus carota]                   159   3e-37
gb|AAD40132.1|AF149413_13 contains similarity to arabinosidase [...   150   1e-34
dbj|BAJ34209.1| unnamed protein product [Thellungiella halophila]     148   4e-34
ref|XP_002884811.1| alpha-L-arabinofuranosidase [Arabidopsis lyr...   148   4e-34
ref|NP_187685.1| alpha-L-arabinofuranosidase 1 [Arabidopsis thal...   148   5e-34

>dbj|BAD30073.1| arabinofuranosidase [Daucus carota]
          Length = 654

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/81 (83%), Positives = 72/81 (88%)
 Frame = +3

Query: 3   SLMSVDTYKGHGFRNDLFKMLADIKPAFFRFPGGCFIEGNRFPNAVRWKDTIGPWEERPG 182
           SLM VDTYKG GFR DLF++LAD+KPAF RFPGGCF+EG R PNAVRWKDTIGPWEERPG
Sbjct: 226 SLMPVDTYKGLGFREDLFQLLADLKPAFLRFPGGCFVEGGRLPNAVRWKDTIGPWEERPG 285

Query: 183 H*GDVWDYWTDDGLGHLEFLQ 245
           H GDVWDYWTDDGLGH EF Q
Sbjct: 286 HYGDVWDYWTDDGLGHFEFFQ 306


>gb|AAD40132.1|AF149413_13 contains similarity to arabinosidase [Arabidopsis thaliana]
          Length = 521

 Score =  150 bits (378), Expect = 1e-34
 Identities = 62/88 (70%), Positives = 72/88 (81%)
 Frame = +3

Query: 3   SLMSVDTYKGHGFRNDLFKMLADIKPAFFRFPGGCFIEGNRFPNAVRWKDTIGPWEERPG 182
           S M +DTYKGHGFRNDLF+M+ D+KP F RFPGGCF+EG+   NA RWK+T+  WEERPG
Sbjct: 109 SAMPMDTYKGHGFRNDLFQMMVDLKPRFIRFPGGCFVEGDWLGNAFRWKETVRAWEERPG 168

Query: 183 H*GDVWDYWTDDGLGHLEFLQEILDGLE 266
           H GDVW YWTDDGLGH EF QE +DG+E
Sbjct: 169 HYGDVWKYWTDDGLGHFEFFQEAIDGIE 196


>dbj|BAJ34209.1| unnamed protein product [Thellungiella halophila]
          Length = 677

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/81 (76%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLMSVDTYKGHGFRNDLFKMLADIKPAFFRFPGGCFIEGNRFPNAVRWKDTIGPWEERPG 182
           S M VDTYKGHGFRNDLF+M+ DIKP F RFPGGCF+EG    NA RWK+T+GPWEERPG
Sbjct: 235 SAMPVDTYKGHGFRNDLFQMMVDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPG 294

Query: 183 H*GDVWDYWTDDGLGHLEFLQ 245
           H GDVW YWTDDGLGH EF Q
Sbjct: 295 HFGDVWKYWTDDGLGHFEFFQ 315


>ref|XP_002884811.1| alpha-L-arabinofuranosidase [Arabidopsis lyrata subsp. lyrata]
           gi|297330651|gb|EFH61070.1| alpha-L-arabinofuranosidase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 676

 Score =  148 bits (374), Expect = 4e-34
 Identities = 62/81 (76%), Positives = 67/81 (82%)
 Frame = +3

Query: 3   SLMSVDTYKGHGFRNDLFKMLADIKPAFFRFPGGCFIEGNRFPNAVRWKDTIGPWEERPG 182
           S M VDTYKGHGFRNDLF+M+ DIKP F RFPGGCF+EG    NA RWK+T+GPWEERPG
Sbjct: 233 SAMPVDTYKGHGFRNDLFQMMVDIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPG 292

Query: 183 H*GDVWDYWTDDGLGHLEFLQ 245
           H GDVW YWTDDGLGH EF Q
Sbjct: 293 HFGDVWKYWTDDGLGHFEFFQ 313


>ref|NP_187685.1| alpha-L-arabinofuranosidase 1 [Arabidopsis thaliana]
           gi|75265802|sp|Q9SG80.1|ASD1_ARATH RecName:
           Full=Alpha-L-arabinofuranosidase 1; Short=AtASD1;
           AltName: Full=Beta-D-xylosidase; Flags: Precursor
           gi|6630556|gb|AAF19575.1|AC011708_18 putative
           alpha-L-arabinofuranosidase [Arabidopsis thaliana]
           gi|332641428|gb|AEE74949.1| alpha-L-arabinofuranosidase
           1 [Arabidopsis thaliana]
          Length = 678

 Score =  148 bits (373), Expect = 5e-34
 Identities = 62/81 (76%), Positives = 68/81 (83%)
 Frame = +3

Query: 3   SLMSVDTYKGHGFRNDLFKMLADIKPAFFRFPGGCFIEGNRFPNAVRWKDTIGPWEERPG 182
           S M VDT+KGHGFRNDLF+M+ADIKP F RFPGGCF+EG    NA RWK+T+GPWEERPG
Sbjct: 235 SAMPVDTHKGHGFRNDLFQMMADIKPRFIRFPGGCFVEGEWLSNAFRWKETVGPWEERPG 294

Query: 183 H*GDVWDYWTDDGLGHLEFLQ 245
           H GDVW YWTDDGLGH EF Q
Sbjct: 295 HFGDVWKYWTDDGLGHFEFFQ 315


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