BLASTX nr result

ID: Cnidium21_contig00026000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00026000
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513372.1| pentatricopeptide repeat-containing protein,...   353   2e-95
ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|2...   350   3e-94
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   342   6e-92
emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]   342   6e-92
ref|XP_002883266.1| pentatricopeptide repeat-containing protein ...   264   2e-68

>ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547280|gb|EEF48775.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 597

 Score =  353 bits (907), Expect = 2e-95
 Identities = 166/264 (62%), Positives = 216/264 (81%)
 Frame = +3

Query: 18   NDLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALI 197
            N+L+ V ++HGI+I+LGF S   L GSLIDAY K   ++SA+ +YKSML+ D +S TA++
Sbjct: 253  NNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIM 312

Query: 198  TGYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQ 377
            TGYAR+      A++LF +++ + + ID++  C+MLN+CA++ASL +GRQIHA+A+K Y+
Sbjct: 313  TGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIK-YK 371

Query: 378  SSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYK 557
             S+D+A  NAL+DMY+KSGE+ DA + FYEM++KNVISWTSLI GYGKHG    ++ LYK
Sbjct: 372  PSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYK 431

Query: 558  KMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARG 737
            KME+ GL PNDITFLSLLFACSH+GLT EGWECF NM+ KYNILPRAEHYSCM+DLFARG
Sbjct: 432  KMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARG 491

Query: 738  GQLEEACDLICKMQIKPNASLWGS 809
            GQLEEA ++ICKM IKPN+SLWG+
Sbjct: 492  GQLEEAYNMICKMNIKPNSSLWGA 515



 Score =  105 bits (261), Expect = 2e-20
 Identities = 65/201 (32%), Positives = 107/201 (53%)
 Frame = +3

Query: 21  DLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALIT 200
           DL     +H  +I+ GF S   L+  LI  YVK G   +A  ++  M   + VS TA I+
Sbjct: 52  DLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQIS 111

Query: 201 GYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQS 380
           GYA+ G +   A+ +F+++ R  +  +     S+L  C  L  L  G QIH   ++K + 
Sbjct: 112 GYAKNG-HYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG-CIQKNRF 169

Query: 381 SHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKK 560
             ++ + +AL+D++SK G M DA  +F  M +++V+SW ++I GY      D S +++  
Sbjct: 170 IGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYS 229

Query: 561 MEHNGLMPNDITFLSLLFACS 623
           M   G+ P+  T  S+L A S
Sbjct: 230 MMGEGVTPDCFTLGSVLKASS 250



 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 45/160 (28%), Positives = 81/160 (50%)
 Frame = +3

Query: 276 IDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQ 455
           + + +   +L +C     L  G  IH+  ++    S+ + +S  LI  Y K GE  +A +
Sbjct: 35  LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSN-LHLSTKLIIFYVKFGETINARK 93

Query: 456 IFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGL 635
           +F  M ++NV+SWT+ I+GY K+G    +L ++ +M   G+  N  T+ S+L AC+    
Sbjct: 94  VFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRC 153

Query: 636 TNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
              G +     + K   +      S +VDL ++ G +E+A
Sbjct: 154 LERGMQ-IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDA 192



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
 Frame = +3

Query: 39  KMHGIVIKLGFQSFNILTGS-LIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
           ++H + IK    S+++ TG+ L+D Y K G +  A   +  M   + +S T+LITGY + 
Sbjct: 362 QIHALAIKYK-PSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKH 420

Query: 216 GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
           G     A+ L+ ++    L  ++I   S+L  C++      G +     + KY       
Sbjct: 421 GYGH-EAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAE 479

Query: 396 MSNALIDMYSKSGEMNDANQIFYEME-KKNVISWTSLIAGYGKHG 527
             + +ID++++ G++ +A  +  +M  K N   W +++     +G
Sbjct: 480 HYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYG 524


>ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|222853575|gb|EEE91122.1|
            predicted protein [Populus trichocarpa]
          Length = 551

 Score =  350 bits (897), Expect = 3e-94
 Identities = 170/269 (63%), Positives = 216/269 (80%)
 Frame = +3

Query: 3    AFGGDNDLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVS 182
            A G  +D++ V ++H ++I+LG+ S   L+GSLIDAY KC S+ SA+ +YKSM   D +S
Sbjct: 208  ASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMIS 267

Query: 183  CTALITGYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIA 362
            CTAL+TGYAR+      A++LF E+++M + ID++ILCSM NICAN++SL +GRQIHA+A
Sbjct: 268  CTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALA 327

Query: 363  VKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTS 542
            +K  + ++D+AM NALIDMY+KSGE+ DAN+ F EME+KNVISWTSLI GYG HG    +
Sbjct: 328  LK-CKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEA 386

Query: 543  LKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVD 722
            + L+KKME+ GL PNDITFLSLLFAC+H GLT EGWECF NM+ KYNILPRAEH+SCMVD
Sbjct: 387  IALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVD 446

Query: 723  LFARGGQLEEACDLICKMQIKPNASLWGS 809
            LFARGG LEEA +LI KM IKPNASLWG+
Sbjct: 447  LFARGGLLEEAYNLINKMNIKPNASLWGA 475



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 60/193 (31%), Positives = 104/193 (53%), Gaps = 1/193 (0%)
 Frame = +3

Query: 42  MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
           +H  ++  GF S   L+  LI  Y K G   SA  ++  M     VS +A I+GY++ G 
Sbjct: 19  IHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNG- 77

Query: 222 NCI-GAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAM 398
            C   A+ +F ++ R     +     S+L  C  L  L  G QI    ++K + + ++ +
Sbjct: 78  -CYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG-CLEKSRFASNLIV 135

Query: 399 SNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGL 578
            +AL+D++SK G+M DA+ +F  ME+++V+SW ++I  Y   G +  S ++++ M   G+
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGM 195

Query: 579 MPNDITFLSLLFA 617
            P+  TF S+L A
Sbjct: 196 SPDLFTFGSVLKA 208



 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 62/259 (23%), Positives = 131/259 (50%), Gaps = 1/259 (0%)
 Frame = +3

Query: 36  MKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
           M++ G + K  F S  I+  +L+D + KCG +  A+ ++  M   D VS  A+I  YA +
Sbjct: 118 MQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQ 177

Query: 216 GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
           G +   +  +F  + +  ++ D     S+L      + ++   QIH + ++    SH ++
Sbjct: 178 GFSG-DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSH-IS 235

Query: 396 MSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGD-ADTSLKLYKKMEHN 572
           +S +LID Y+K   +  A+ ++  M  K++IS T+L+ GY +  + +  +L L+K+++  
Sbjct: 236 LSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQM 295

Query: 573 GLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEE 752
            +  +D+   S+   C++    + G +    +  K          + ++D++A+ G++++
Sbjct: 296 HMKIDDVILCSMFNICANISSLSVGRQIHA-LALKCKPTYDVAMGNALIDMYAKSGEIKD 354

Query: 753 ACDLICKMQIKPNASLWGS 809
           A     +M+ K N   W S
Sbjct: 355 ANRAFNEMEEK-NVISWTS 372



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 42/159 (26%), Positives = 76/159 (47%)
 Frame = +3

Query: 303 LNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKN 482
           L +C    +   G  IH   +    +S+ + +S  LI  YSK G+   A ++F  M ++ 
Sbjct: 4   LQLCIETKAKKPGHLIHNQILTNGFASN-IHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62

Query: 483 VISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFT 662
           V+SW++ I+GY ++G    +L ++  M   G   N  T+ S+L AC+       G +   
Sbjct: 63  VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQ-IQ 121

Query: 663 NMVGKYNILPRAEHYSCMVDLFARGGQLEEACDLICKMQ 779
             + K          S ++DL ++ G++E+A  L   M+
Sbjct: 122 GCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMME 160


>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  342 bits (877), Expect = 6e-92
 Identities = 168/262 (64%), Positives = 208/262 (79%)
 Frame = +3

Query: 24   LLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITG 203
            L++  ++HGI+ +LG+ S++I+TG LI+AY K GS+RSA ++ K ML+ D  S TALITG
Sbjct: 248  LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 307

Query: 204  YAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSS 383
            YA EG   + A++LF E+ +M++ +D++ILCSMLNICANLAS  LG QIHA A+K YQ S
Sbjct: 308  YAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK-YQPS 366

Query: 384  HDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKM 563
            +D+AM NALIDMY+KSGE+ DA + F EME+KNVISWTSLI+GY KHG    ++ LYKKM
Sbjct: 367  YDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKM 426

Query: 564  EHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQ 743
            E  G  PND+TFLSLLFACSH GLT EG ECF NMV KYNI PRAEHYSCMVDLFAR G 
Sbjct: 427  ESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGL 486

Query: 744  LEEACDLICKMQIKPNASLWGS 809
            LEEA +L+CK+ IK NASLWG+
Sbjct: 487  LEEAYNLLCKIDIKHNASLWGA 508



 Score =  155 bits (393), Expect = 8e-36
 Identities = 83/258 (32%), Positives = 141/258 (54%)
 Frame = +3

Query: 36   MKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
            M +H  ++  GF+S + +  SLI  Y KCG + S+N I+  +     ++  A++   A  
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 1330

Query: 216  GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
            G     A+++F E+R + + +D       L   ANLA L  G+Q+H + +K    S D+ 
Sbjct: 1331 GCG-EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES-DLH 1388

Query: 396  MSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNG 575
            ++NA +DMY K GEM+D  ++  +   ++ +SW  LI+ + +HG    + + + +M   G
Sbjct: 1389 VTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 1448

Query: 576  LMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
              P+ +TF+SLL AC+H GL +EG   + +M  ++ + P  EH  C++DL  R G+L  A
Sbjct: 1449 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 1508

Query: 756  CDLICKMQIKPNASLWGS 809
               I +M + PN   W S
Sbjct: 1509 EGFIKEMPVPPNDLAWRS 1526



 Score =  115 bits (288), Expect = 1e-23
 Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 4/245 (1%)
 Frame = +3

Query: 42  MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
           +H  +I  GF S   L   LI  YVK G V +A N++  M     VS TA+++GY++ G+
Sbjct: 52  IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111

Query: 222 NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMS 401
               A  LF+++R   +  +     S L  C +L  L +G Q+    ++K +   ++ + 
Sbjct: 112 -FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG-CIQKGRFVENLFVK 169

Query: 402 NALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLM 581
           +AL+D +SK G+M DA+ +F  M +++V+SW ++I GY   G AD S  +++ M   GL+
Sbjct: 170 SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 229

Query: 582 PNDITFLSLLFACSHNG---LTNEGWECFTNM-VGKYNILPRAEHYSCMVDLFARGGQLE 749
           P+  T  S+L A +  G   + N+     T +  G Y+I+        +++ +A+ G L 
Sbjct: 230 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-----GLLINAYAKNGSLR 284

Query: 750 EACDL 764
            A DL
Sbjct: 285 SAKDL 289



 Score =  107 bits (268), Expect = 2e-21
 Identities = 55/195 (28%), Positives = 110/195 (56%), Gaps = 1/195 (0%)
 Frame = +3

Query: 42   MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
            +HG+V+KLG  S   +  +L+  Y + G    A  ++++M   D +S  +++  Y ++G+
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129

Query: 222  NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD-MAM 398
             C+  +++  EL +M   ++++   S L  C+N   L+  + +HA+ +      HD + +
Sbjct: 1130 -CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII--VAGFHDFLIV 1186

Query: 399  SNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGL 578
             NAL+ MY K G M +A ++   M + + ++W +LI G+ ++ + + ++K YK +   G+
Sbjct: 1187 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 1246

Query: 579  MPNDITFLSLLFACS 623
              N IT +S+L ACS
Sbjct: 1247 PANYITMVSVLGACS 1261



 Score =  105 bits (262), Expect = 1e-20
 Identities = 61/202 (30%), Positives = 111/202 (54%)
 Frame = +3

Query: 21   DLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALIT 200
            D ++  ++ G +I+ GF+    +  SLI  +    SV  A  ++  M   D +S  A+I+
Sbjct: 962  DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 1021

Query: 201  GYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQS 380
             YA  G  C  ++  F+ +R +    ++  L S+L++C+++ +L  GR IH + VK    
Sbjct: 1022 AYAHHGL-CRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080

Query: 381  SHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKK 560
            S+ + + N L+ +YS++G   DA  +F  M ++++ISW S++A Y + G     LK+  +
Sbjct: 1081 SN-VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAE 1139

Query: 561  MEHNGLMPNDITFLSLLFACSH 626
            +   G + N +TF S L ACS+
Sbjct: 1140 LLQMGKVMNHVTFASALAACSN 1161



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
 Frame = +3

Query: 30  MVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYA 209
           M +++ G + K  F     +  +L+D + KCG +  A+ ++ +M+  D VS  A+I GYA
Sbjct: 149 MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA 208

Query: 210 REGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD 389
            +G     +  +F  + R  L  D   L S+L   A    L++  QIH I  +    S+D
Sbjct: 209 VQG-FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 267

Query: 390 MAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADT-SLKLYKKME 566
           + ++  LI+ Y+K+G +  A  +   M KK++ S T+LI GY   G     +L L+K+M 
Sbjct: 268 I-VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 326

Query: 567 HNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQL 746
              +  +D+   S+L  C++      G +     + KY         + ++D++A+ G++
Sbjct: 327 QMNIGMDDVILCSMLNICANLASFALGTQIHAFAL-KYQPSYDVAMGNALIDMYAKSGEI 385

Query: 747 EEACDLICKMQIKPNASLWGS 809
           E+A     +M+ K N   W S
Sbjct: 386 EDAKRAFDEMEEK-NVISWTS 405



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 4/227 (1%)
 Frame = +3

Query: 90   TGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQNCIGAVELFNELRRMS 269
            T +LI+ Y K G++  A  ++  M   +  S + +++GY R G     AV LF ++  + 
Sbjct: 782  TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLY-EEAVGLFCQMWGLG 840

Query: 270  LAIDNIILCSMLNICANLASLV-LGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMND 446
            +  +  ++ S++  C+    +   G Q+H   VK      D+ +  AL+  Y   G + +
Sbjct: 841  VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILG-DVYVGTALVHFYGSIGLVYN 899

Query: 447  ANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSH 626
            A ++F EM   NV+SWTSL+ GY   G+    L +Y++M   G+  N  TF ++  +C  
Sbjct: 900  AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC-- 957

Query: 627  NGLTNE---GWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEAC 758
             GL  +   G++   +++ +Y         + ++ +F+    +EEAC
Sbjct: 958  -GLLEDQVLGYQVLGHII-QYGFEDSVSVANSLISMFSSFSSVEEAC 1002



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
 Frame = +3

Query: 39   KMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREG 218
            ++HG V+K G      +  +L+  Y   G V +A  +++ M   + VS T+L+ GY+  G
Sbjct: 867  QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926

Query: 219  QNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQI--HAIAVKKYQSSHDM 392
             N    + ++  +R+  ++ +     ++ + C  L   VLG Q+  H I   +Y     +
Sbjct: 927  -NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII---QYGFEDSV 982

Query: 393  AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
            +++N+LI M+S    + +A  +F  M + ++ISW ++I+ Y  HG    SL+ +  M H 
Sbjct: 983  SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042

Query: 573  GLMPNDITFLSLLFACSHNGLTNEGW-ECFTNMVGKYNILPRAEHYSCMVDLFARGGQLE 749
                N  T  SLL  CS   + N  W      +V K  +       + ++ L++  G+ E
Sbjct: 1043 HNETNSTTLSSLLSVCS--SVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 1100

Query: 750  EACDLICKMQIKPNASLWGS 809
            +A +L+ +   + +   W S
Sbjct: 1101 DA-ELVFQAMTERDLISWNS 1119



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
 Frame = +3

Query: 39   KMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREG 218
            ++HG+VIKLGF+S   +T + +D Y KCG +     +    +    +S   LI+ +AR G
Sbjct: 1373 QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHG 1432

Query: 219  QNCIG-AVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
              C   A E F+E+ ++    D++   S+L+ C +   +  G   +    +++     + 
Sbjct: 1433 --CFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 1490

Query: 396  MSNALIDMYSKSGEMNDANQIFYEME-KKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
                +ID+  +SG ++ A     EM    N ++W SL+A    HG+ + +    K  EH 
Sbjct: 1491 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA---RKTAEH- 1546

Query: 573  GLMPNDITFLSLLFACSHNGLTNEGWECFTNM---VGKYNI 686
             L+  D +  S     S+   T+  WE   N+   +G  NI
Sbjct: 1547 -LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 1586



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
 Frame = +3

Query: 315  ANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISW 494
            + + S + G+ +HA  +     +  +  +N LI+MYSK G +  A  +F EM  +N  SW
Sbjct: 755  SEITSQMAGKALHAFCIVG-SVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 813

Query: 495  TSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNG-LTNEGWE 653
            +++++GY + G  + ++ L+ +M   G+ PN     SL+ ACS +G + +EG++
Sbjct: 814  STMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867


>emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  342 bits (877), Expect = 6e-92
 Identities = 168/262 (64%), Positives = 208/262 (79%)
 Frame = +3

Query: 24   LLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITG 203
            L++  ++HGI+ +LG+ S++I+TG LI+AY K GS+RSA ++ K ML+ D  S TALITG
Sbjct: 369  LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 428

Query: 204  YAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSS 383
            YA EG   + A++LF E+ +M++ +D++ILCSMLNICANLAS  LG QIHA A+K YQ S
Sbjct: 429  YAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK-YQPS 487

Query: 384  HDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKM 563
            +D+AM NALIDMY+KSGE+ DA + F EME+KNVISWTSLI+GY KHG    ++ LYKKM
Sbjct: 488  YDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKM 547

Query: 564  EHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQ 743
            E  G  PND+TFLSLLFACSH GLT EG ECF NMV KYNI PRAEHYSCMVDLFAR G 
Sbjct: 548  ESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGL 607

Query: 744  LEEACDLICKMQIKPNASLWGS 809
            LEEA +L+CK+ IK NASLWG+
Sbjct: 608  LEEAYNLLCKIDIKHNASLWGA 629



 Score =  115 bits (288), Expect = 1e-23
 Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 4/245 (1%)
 Frame = +3

Query: 42  MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
           +H  +I  GF S   L   LI  YVK G V +A N++  M     VS TA+++GY++ G+
Sbjct: 173 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 232

Query: 222 NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMS 401
               A  LF+++R   +  +     S L  C +L  L +G Q+    ++K +   ++ + 
Sbjct: 233 -FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG-CIQKGRFVENLFVK 290

Query: 402 NALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLM 581
           +AL+D +SK G+M DA+ +F  M +++V+SW ++I GY   G AD S  +++ M   GL+
Sbjct: 291 SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 350

Query: 582 PNDITFLSLLFACSHNG---LTNEGWECFTNM-VGKYNILPRAEHYSCMVDLFARGGQLE 749
           P+  T  S+L A +  G   + N+     T +  G Y+I+        +++ +A+ G L 
Sbjct: 351 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-----GLLINAYAKNGSLR 405

Query: 750 EACDL 764
            A DL
Sbjct: 406 SAKDL 410



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
 Frame = +3

Query: 30   MVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYA 209
            M +++ G + K  F     +  +L+D + KCG +  A+ ++ +M+  D VS  A+I GYA
Sbjct: 270  MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA 329

Query: 210  REGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD 389
             +G     +  +F  + R  L  D   L S+L   A    L++  QIH I  +    S+D
Sbjct: 330  VQG-FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 388

Query: 390  MAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADT-SLKLYKKME 566
            + ++  LI+ Y+K+G +  A  +   M KK++ S T+LI GY   G     +L L+K+M 
Sbjct: 389  I-VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 447

Query: 567  HNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQL 746
               +  +D+   S+L  C++      G +     + KY         + ++D++A+ G++
Sbjct: 448  QMNIGMDDVILCSMLNICANLASFALGTQIHAFAL-KYQPSYDVAMGNALIDMYAKSGEI 506

Query: 747  EEACDLICKMQIKPNASLWGS 809
            E+A     +M+ K N   W S
Sbjct: 507  EDAKRAFDEMEEK-NVISWTS 526


>ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297329106|gb|EFH59525.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 564

 Score =  264 bits (675), Expect = 2e-68
 Identities = 127/261 (48%), Positives = 181/261 (69%), Gaps = 2/261 (0%)
 Frame = +3

Query: 33   VMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAR 212
            V ++HG+ IKLGF   + L  SL+DAYVKCGS+ +A  +++   + D +SCTALITG+A+
Sbjct: 233  VGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQ 292

Query: 213  EGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDM 392
            +      A ++FNE+  M   +D +++ SML IC  +AS+ +GRQIH  A+K  Q   D+
Sbjct: 293  QNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDI 352

Query: 393  AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
            A+ N+LIDMY+KSG++ DA   F EM++K+V SWTSLIAGYG+HG+ + ++ LY +MEH 
Sbjct: 353  ALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412

Query: 573  GLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEE 752
            G+ PND+TFLSLL ACSH G T  GW+ F  M+ K+ I  R EH+SC++D+ AR G LEE
Sbjct: 413  GIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLEE 472

Query: 753  ACDLICKMQ--IKPNASLWGS 809
            A +LI      I  ++S WG+
Sbjct: 473  AYELIRSKDGIISLSSSTWGA 493



 Score =  102 bits (253), Expect = 1e-19
 Identities = 63/195 (32%), Positives = 109/195 (55%)
 Frame = +3

Query: 33  VMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAR 212
           ++ +HG  +  GF S   L   LID Y+K G V+ A  ++  + + D VS TA+I+ ++R
Sbjct: 31  LLLIHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSR 90

Query: 213 EGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDM 392
            G +   A+ LF ++ R  +  +     S+L  C +L  L  G QI    ++K + + ++
Sbjct: 91  CGYHR-DALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQG-CLEKGKCAGNL 148

Query: 393 AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
            + +AL+ +Y++ G+M DA   F  M++++++SW S+I GY  +   DTS  L++ M   
Sbjct: 149 IVRSALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAE 208

Query: 573 GLMPNDITFLSLLFA 617
           G  P+  TF SLL A
Sbjct: 209 GKKPDCFTFGSLLRA 223



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
 Frame = +3

Query: 291 LCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEM 470
           LCS  N+   L        IH  +V     S+ + +++ LID+Y K G++  A ++F  +
Sbjct: 21  LCSYQNVKKQLLL------IHGNSVTNGFGSN-LQLNDMLIDLYLKQGDVKHARKLFDRI 73

Query: 471 EKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGW 650
            K++V+SWT++I+ + + G    +L L+K+M    +  N  T+ S+L +C   G   EG 
Sbjct: 74  PKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGM 133

Query: 651 E---CFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
           +   C        N++ R    S ++ L+AR G++E+A
Sbjct: 134 QIQGCLEKGKCAGNLIVR----SALLSLYARCGKMEDA 167


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