BLASTX nr result
ID: Cnidium21_contig00026000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00026000
(809 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002513372.1| pentatricopeptide repeat-containing protein,... 353 2e-95
ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|2... 350 3e-94
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi... 342 6e-92
emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera] 342 6e-92
ref|XP_002883266.1| pentatricopeptide repeat-containing protein ... 264 2e-68
>ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547280|gb|EEF48775.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 597
Score = 353 bits (907), Expect = 2e-95
Identities = 166/264 (62%), Positives = 216/264 (81%)
Frame = +3
Query: 18 NDLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALI 197
N+L+ V ++HGI+I+LGF S L GSLIDAY K ++SA+ +YKSML+ D +S TA++
Sbjct: 253 NNLIKVCQIHGIIIQLGFGSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIM 312
Query: 198 TGYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQ 377
TGYAR+ A++LF +++ + + ID++ C+MLN+CA++ASL +GRQIHA+A+K Y+
Sbjct: 313 TGYARKCSYSREALDLFKDMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIK-YK 371
Query: 378 SSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYK 557
S+D+A NAL+DMY+KSGE+ DA + FYEM++KNVISWTSLI GYGKHG ++ LYK
Sbjct: 372 PSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYK 431
Query: 558 KMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARG 737
KME+ GL PNDITFLSLLFACSH+GLT EGWECF NM+ KYNILPRAEHYSCM+DLFARG
Sbjct: 432 KMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARG 491
Query: 738 GQLEEACDLICKMQIKPNASLWGS 809
GQLEEA ++ICKM IKPN+SLWG+
Sbjct: 492 GQLEEAYNMICKMNIKPNSSLWGA 515
Score = 105 bits (261), Expect = 2e-20
Identities = 65/201 (32%), Positives = 107/201 (53%)
Frame = +3
Query: 21 DLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALIT 200
DL +H +I+ GF S L+ LI YVK G +A ++ M + VS TA I+
Sbjct: 52 DLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDRMPERNVVSWTAQIS 111
Query: 201 GYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQS 380
GYA+ G + A+ +F+++ R + + S+L C L L G QIH ++K +
Sbjct: 112 GYAKNG-HYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRCLERGMQIHG-CIQKNRF 169
Query: 381 SHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKK 560
++ + +AL+D++SK G M DA +F M +++V+SW ++I GY D S +++
Sbjct: 170 IGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVIGGYAAQDFNDDSFRMFYS 229
Query: 561 MEHNGLMPNDITFLSLLFACS 623
M G+ P+ T S+L A S
Sbjct: 230 MMGEGVTPDCFTLGSVLKASS 250
Score = 73.6 bits (179), Expect = 5e-11
Identities = 45/160 (28%), Positives = 81/160 (50%)
Frame = +3
Query: 276 IDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQ 455
+ + + +L +C L G IH+ ++ S+ + +S LI Y K GE +A +
Sbjct: 35 LSSSLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSN-LHLSTKLIIFYVKFGETINARK 93
Query: 456 IFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGL 635
+F M ++NV+SWT+ I+GY K+G +L ++ +M G+ N T+ S+L AC+
Sbjct: 94 VFDRMPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACTGLRC 153
Query: 636 TNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
G + + K + S +VDL ++ G +E+A
Sbjct: 154 LERGMQ-IHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDA 192
Score = 61.6 bits (148), Expect = 2e-07
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 2/165 (1%)
Frame = +3
Query: 39 KMHGIVIKLGFQSFNILTGS-LIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
++H + IK S+++ TG+ L+D Y K G + A + M + +S T+LITGY +
Sbjct: 362 QIHALAIKYK-PSYDVATGNALVDMYAKSGEIEDATRAFYEMKEKNVISWTSLITGYGKH 420
Query: 216 GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
G A+ L+ ++ L ++I S+L C++ G + + KY
Sbjct: 421 GYGH-EAIALYKKMEYEGLKPNDITFLSLLFACSHSGLTGEGWECFNNMITKYNILPRAE 479
Query: 396 MSNALIDMYSKSGEMNDANQIFYEME-KKNVISWTSLIAGYGKHG 527
+ +ID++++ G++ +A + +M K N W +++ +G
Sbjct: 480 HYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYG 524
>ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|222853575|gb|EEE91122.1|
predicted protein [Populus trichocarpa]
Length = 551
Score = 350 bits (897), Expect = 3e-94
Identities = 170/269 (63%), Positives = 216/269 (80%)
Frame = +3
Query: 3 AFGGDNDLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVS 182
A G +D++ V ++H ++I+LG+ S L+GSLIDAY KC S+ SA+ +YKSM D +S
Sbjct: 208 ASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMIS 267
Query: 183 CTALITGYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIA 362
CTAL+TGYAR+ A++LF E+++M + ID++ILCSM NICAN++SL +GRQIHA+A
Sbjct: 268 CTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALA 327
Query: 363 VKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTS 542
+K + ++D+AM NALIDMY+KSGE+ DAN+ F EME+KNVISWTSLI GYG HG +
Sbjct: 328 LK-CKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEA 386
Query: 543 LKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVD 722
+ L+KKME+ GL PNDITFLSLLFAC+H GLT EGWECF NM+ KYNILPRAEH+SCMVD
Sbjct: 387 IALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVD 446
Query: 723 LFARGGQLEEACDLICKMQIKPNASLWGS 809
LFARGG LEEA +LI KM IKPNASLWG+
Sbjct: 447 LFARGGLLEEAYNLINKMNIKPNASLWGA 475
Score = 97.1 bits (240), Expect = 4e-18
Identities = 60/193 (31%), Positives = 104/193 (53%), Gaps = 1/193 (0%)
Frame = +3
Query: 42 MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
+H ++ GF S L+ LI Y K G SA ++ M VS +A I+GY++ G
Sbjct: 19 IHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNG- 77
Query: 222 NCI-GAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAM 398
C A+ +F ++ R + S+L C L L G QI ++K + + ++ +
Sbjct: 78 -CYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQG-CLEKSRFASNLIV 135
Query: 399 SNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGL 578
+AL+D++SK G+M DA+ +F ME+++V+SW ++I Y G + S ++++ M G+
Sbjct: 136 QSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGM 195
Query: 579 MPNDITFLSLLFA 617
P+ TF S+L A
Sbjct: 196 SPDLFTFGSVLKA 208
Score = 86.3 bits (212), Expect = 7e-15
Identities = 62/259 (23%), Positives = 131/259 (50%), Gaps = 1/259 (0%)
Frame = +3
Query: 36 MKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
M++ G + K F S I+ +L+D + KCG + A+ ++ M D VS A+I YA +
Sbjct: 118 MQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQ 177
Query: 216 GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
G + + +F + + ++ D S+L + ++ QIH + ++ SH ++
Sbjct: 178 GFSG-DSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSH-IS 235
Query: 396 MSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGD-ADTSLKLYKKMEHN 572
+S +LID Y+K + A+ ++ M K++IS T+L+ GY + + + +L L+K+++
Sbjct: 236 LSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQM 295
Query: 573 GLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEE 752
+ +D+ S+ C++ + G + + K + ++D++A+ G++++
Sbjct: 296 HMKIDDVILCSMFNICANISSLSVGRQIHA-LALKCKPTYDVAMGNALIDMYAKSGEIKD 354
Query: 753 ACDLICKMQIKPNASLWGS 809
A +M+ K N W S
Sbjct: 355 ANRAFNEMEEK-NVISWTS 372
Score = 60.1 bits (144), Expect = 6e-07
Identities = 42/159 (26%), Positives = 76/159 (47%)
Frame = +3
Query: 303 LNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKN 482
L +C + G IH + +S+ + +S LI YSK G+ A ++F M ++
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASN-IHLSTKLIIFYSKLGDTVSARKVFDRMPERT 62
Query: 483 VISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGWECFT 662
V+SW++ I+GY ++G +L ++ M G N T+ S+L AC+ G +
Sbjct: 63 VVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQ-IQ 121
Query: 663 NMVGKYNILPRAEHYSCMVDLFARGGQLEEACDLICKMQ 779
+ K S ++DL ++ G++E+A L M+
Sbjct: 122 GCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMME 160
>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
[Vitis vinifera]
Length = 1724
Score = 342 bits (877), Expect = 6e-92
Identities = 168/262 (64%), Positives = 208/262 (79%)
Frame = +3
Query: 24 LLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITG 203
L++ ++HGI+ +LG+ S++I+TG LI+AY K GS+RSA ++ K ML+ D S TALITG
Sbjct: 248 LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 307
Query: 204 YAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSS 383
YA EG + A++LF E+ +M++ +D++ILCSMLNICANLAS LG QIHA A+K YQ S
Sbjct: 308 YAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK-YQPS 366
Query: 384 HDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKM 563
+D+AM NALIDMY+KSGE+ DA + F EME+KNVISWTSLI+GY KHG ++ LYKKM
Sbjct: 367 YDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKM 426
Query: 564 EHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQ 743
E G PND+TFLSLLFACSH GLT EG ECF NMV KYNI PRAEHYSCMVDLFAR G
Sbjct: 427 ESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGL 486
Query: 744 LEEACDLICKMQIKPNASLWGS 809
LEEA +L+CK+ IK NASLWG+
Sbjct: 487 LEEAYNLLCKIDIKHNASLWGA 508
Score = 155 bits (393), Expect = 8e-36
Identities = 83/258 (32%), Positives = 141/258 (54%)
Frame = +3
Query: 36 MKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYARE 215
M +H ++ GF+S + + SLI Y KCG + S+N I+ + ++ A++ A
Sbjct: 1271 MPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHH 1330
Query: 216 GQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
G A+++F E+R + + +D L ANLA L G+Q+H + +K S D+
Sbjct: 1331 GCG-EEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFES-DLH 1388
Query: 396 MSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNG 575
++NA +DMY K GEM+D ++ + ++ +SW LI+ + +HG + + + +M G
Sbjct: 1389 VTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLG 1448
Query: 576 LMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
P+ +TF+SLL AC+H GL +EG + +M ++ + P EH C++DL R G+L A
Sbjct: 1449 PKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHA 1508
Query: 756 CDLICKMQIKPNASLWGS 809
I +M + PN W S
Sbjct: 1509 EGFIKEMPVPPNDLAWRS 1526
Score = 115 bits (288), Expect = 1e-23
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 4/245 (1%)
Frame = +3
Query: 42 MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
+H +I GF S L LI YVK G V +A N++ M VS TA+++GY++ G+
Sbjct: 52 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 111
Query: 222 NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMS 401
A LF+++R + + S L C +L L +G Q+ ++K + ++ +
Sbjct: 112 -FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG-CIQKGRFVENLFVK 169
Query: 402 NALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLM 581
+AL+D +SK G+M DA+ +F M +++V+SW ++I GY G AD S +++ M GL+
Sbjct: 170 SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 229
Query: 582 PNDITFLSLLFACSHNG---LTNEGWECFTNM-VGKYNILPRAEHYSCMVDLFARGGQLE 749
P+ T S+L A + G + N+ T + G Y+I+ +++ +A+ G L
Sbjct: 230 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-----GLLINAYAKNGSLR 284
Query: 750 EACDL 764
A DL
Sbjct: 285 SAKDL 289
Score = 107 bits (268), Expect = 2e-21
Identities = 55/195 (28%), Positives = 110/195 (56%), Gaps = 1/195 (0%)
Frame = +3
Query: 42 MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
+HG+V+KLG S + +L+ Y + G A ++++M D +S +++ Y ++G+
Sbjct: 1070 IHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGK 1129
Query: 222 NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD-MAM 398
C+ +++ EL +M ++++ S L C+N L+ + +HA+ + HD + +
Sbjct: 1130 -CLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALII--VAGFHDFLIV 1186
Query: 399 SNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGL 578
NAL+ MY K G M +A ++ M + + ++W +LI G+ ++ + + ++K YK + G+
Sbjct: 1187 GNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGI 1246
Query: 579 MPNDITFLSLLFACS 623
N IT +S+L ACS
Sbjct: 1247 PANYITMVSVLGACS 1261
Score = 105 bits (262), Expect = 1e-20
Identities = 61/202 (30%), Positives = 111/202 (54%)
Frame = +3
Query: 21 DLLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALIT 200
D ++ ++ G +I+ GF+ + SLI + SV A ++ M D +S A+I+
Sbjct: 962 DQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMIS 1021
Query: 201 GYAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQS 380
YA G C ++ F+ +R + ++ L S+L++C+++ +L GR IH + VK
Sbjct: 1022 AYAHHGL-CRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLD 1080
Query: 381 SHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKK 560
S+ + + N L+ +YS++G DA +F M ++++ISW S++A Y + G LK+ +
Sbjct: 1081 SN-VCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAE 1139
Query: 561 MEHNGLMPNDITFLSLLFACSH 626
+ G + N +TF S L ACS+
Sbjct: 1140 LLQMGKVMNHVTFASALAACSN 1161
Score = 96.3 bits (238), Expect = 7e-18
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Frame = +3
Query: 30 MVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYA 209
M +++ G + K F + +L+D + KCG + A+ ++ +M+ D VS A+I GYA
Sbjct: 149 MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA 208
Query: 210 REGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD 389
+G + +F + R L D L S+L A L++ QIH I + S+D
Sbjct: 209 VQG-FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 267
Query: 390 MAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADT-SLKLYKKME 566
+ ++ LI+ Y+K+G + A + M KK++ S T+LI GY G +L L+K+M
Sbjct: 268 I-VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 326
Query: 567 HNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQL 746
+ +D+ S+L C++ G + + KY + ++D++A+ G++
Sbjct: 327 QMNIGMDDVILCSMLNICANLASFALGTQIHAFAL-KYQPSYDVAMGNALIDMYAKSGEI 385
Query: 747 EEACDLICKMQIKPNASLWGS 809
E+A +M+ K N W S
Sbjct: 386 EDAKRAFDEMEEK-NVISWTS 405
Score = 91.7 bits (226), Expect = 2e-16
Identities = 60/227 (26%), Positives = 113/227 (49%), Gaps = 4/227 (1%)
Frame = +3
Query: 90 TGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQNCIGAVELFNELRRMS 269
T +LI+ Y K G++ A ++ M + S + +++GY R G AV LF ++ +
Sbjct: 782 TNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRVGLY-EEAVGLFCQMWGLG 840
Query: 270 LAIDNIILCSMLNICANLASLV-LGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMND 446
+ + ++ S++ C+ + G Q+H VK D+ + AL+ Y G + +
Sbjct: 841 VEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILG-DVYVGTALVHFYGSIGLVYN 899
Query: 447 ANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSH 626
A ++F EM NV+SWTSL+ GY G+ L +Y++M G+ N TF ++ +C
Sbjct: 900 AQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSC-- 957
Query: 627 NGLTNE---GWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEAC 758
GL + G++ +++ +Y + ++ +F+ +EEAC
Sbjct: 958 -GLLEDQVLGYQVLGHII-QYGFEDSVSVANSLISMFSSFSSVEEAC 1002
Score = 88.2 bits (217), Expect = 2e-15
Identities = 66/260 (25%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Frame = +3
Query: 39 KMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREG 218
++HG V+K G + +L+ Y G V +A +++ M + VS T+L+ GY+ G
Sbjct: 867 QVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSG 926
Query: 219 QNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQI--HAIAVKKYQSSHDM 392
N + ++ +R+ ++ + ++ + C L VLG Q+ H I +Y +
Sbjct: 927 -NPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHII---QYGFEDSV 982
Query: 393 AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
+++N+LI M+S + +A +F M + ++ISW ++I+ Y HG SL+ + M H
Sbjct: 983 SVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHL 1042
Query: 573 GLMPNDITFLSLLFACSHNGLTNEGW-ECFTNMVGKYNILPRAEHYSCMVDLFARGGQLE 749
N T SLL CS + N W +V K + + ++ L++ G+ E
Sbjct: 1043 HNETNSTTLSSLLSVCS--SVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSE 1100
Query: 750 EACDLICKMQIKPNASLWGS 809
+A +L+ + + + W S
Sbjct: 1101 DA-ELVFQAMTERDLISWNS 1119
Score = 69.7 bits (169), Expect = 7e-10
Identities = 59/221 (26%), Positives = 104/221 (47%), Gaps = 5/221 (2%)
Frame = +3
Query: 39 KMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREG 218
++HG+VIKLGF+S +T + +D Y KCG + + + +S LI+ +AR G
Sbjct: 1373 QLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHG 1432
Query: 219 QNCIG-AVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMA 395
C A E F+E+ ++ D++ S+L+ C + + G + +++ +
Sbjct: 1433 --CFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIE 1490
Query: 396 MSNALIDMYSKSGEMNDANQIFYEME-KKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
+ID+ +SG ++ A EM N ++W SL+A HG+ + + K EH
Sbjct: 1491 HCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELA---RKTAEH- 1546
Query: 573 GLMPNDITFLSLLFACSHNGLTNEGWECFTNM---VGKYNI 686
L+ D + S S+ T+ WE N+ +G NI
Sbjct: 1547 -LLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNI 1586
Score = 64.7 bits (156), Expect = 2e-08
Identities = 35/114 (30%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +3
Query: 315 ANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISW 494
+ + S + G+ +HA + + + +N LI+MYSK G + A +F EM +N SW
Sbjct: 755 SEITSQMAGKALHAFCIVG-SVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASW 813
Query: 495 TSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNG-LTNEGWE 653
+++++GY + G + ++ L+ +M G+ PN SL+ ACS +G + +EG++
Sbjct: 814 STMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQ 867
>emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 342 bits (877), Expect = 6e-92
Identities = 168/262 (64%), Positives = 208/262 (79%)
Frame = +3
Query: 24 LLMVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITG 203
L++ ++HGI+ +LG+ S++I+TG LI+AY K GS+RSA ++ K ML+ D S TALITG
Sbjct: 369 LIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITG 428
Query: 204 YAREGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSS 383
YA EG + A++LF E+ +M++ +D++ILCSMLNICANLAS LG QIHA A+K YQ S
Sbjct: 429 YAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK-YQPS 487
Query: 384 HDMAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKM 563
+D+AM NALIDMY+KSGE+ DA + F EME+KNVISWTSLI+GY KHG ++ LYKKM
Sbjct: 488 YDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKM 547
Query: 564 EHNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQ 743
E G PND+TFLSLLFACSH GLT EG ECF NMV KYNI PRAEHYSCMVDLFAR G
Sbjct: 548 ESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGL 607
Query: 744 LEEACDLICKMQIKPNASLWGS 809
LEEA +L+CK+ IK NASLWG+
Sbjct: 608 LEEAYNLLCKIDIKHNASLWGA 629
Score = 115 bits (288), Expect = 1e-23
Identities = 76/245 (31%), Positives = 130/245 (53%), Gaps = 4/245 (1%)
Frame = +3
Query: 42 MHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAREGQ 221
+H +I GF S L LI YVK G V +A N++ M VS TA+++GY++ G+
Sbjct: 173 IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGR 232
Query: 222 NCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMS 401
A LF+++R + + S L C +L L +G Q+ ++K + ++ +
Sbjct: 233 -FEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQG-CIQKGRFVENLFVK 290
Query: 402 NALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLM 581
+AL+D +SK G+M DA+ +F M +++V+SW ++I GY G AD S +++ M GL+
Sbjct: 291 SALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLV 350
Query: 582 PNDITFLSLLFACSHNG---LTNEGWECFTNM-VGKYNILPRAEHYSCMVDLFARGGQLE 749
P+ T S+L A + G + N+ T + G Y+I+ +++ +A+ G L
Sbjct: 351 PDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVT-----GLLINAYAKNGSLR 405
Query: 750 EACDL 764
A DL
Sbjct: 406 SAKDL 410
Score = 96.3 bits (238), Expect = 7e-18
Identities = 72/261 (27%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Frame = +3
Query: 30 MVMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYA 209
M +++ G + K F + +L+D + KCG + A+ ++ +M+ D VS A+I GYA
Sbjct: 270 MGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYA 329
Query: 210 REGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHD 389
+G + +F + R L D L S+L A L++ QIH I + S+D
Sbjct: 330 VQG-FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYD 388
Query: 390 MAMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADT-SLKLYKKME 566
+ ++ LI+ Y+K+G + A + M KK++ S T+LI GY G +L L+K+M
Sbjct: 389 I-VTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMN 447
Query: 567 HNGLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQL 746
+ +D+ S+L C++ G + + KY + ++D++A+ G++
Sbjct: 448 QMNIGMDDVILCSMLNICANLASFALGTQIHAFAL-KYQPSYDVAMGNALIDMYAKSGEI 506
Query: 747 EEACDLICKMQIKPNASLWGS 809
E+A +M+ K N W S
Sbjct: 507 EDAKRAFDEMEEK-NVISWTS 526
>ref|XP_002883266.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329106|gb|EFH59525.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 564
Score = 264 bits (675), Expect = 2e-68
Identities = 127/261 (48%), Positives = 181/261 (69%), Gaps = 2/261 (0%)
Frame = +3
Query: 33 VMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAR 212
V ++HG+ IKLGF + L SL+DAYVKCGS+ +A +++ + D +SCTALITG+A+
Sbjct: 233 VGQLHGLAIKLGFGRSSALIRSLVDAYVKCGSIANAWKLHEDTTKRDLISCTALITGFAQ 292
Query: 213 EGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDM 392
+ A ++FNE+ M +D +++ SML IC +AS+ +GRQIH A+K Q D+
Sbjct: 293 QNICTSDAFDIFNEMILMKTKMDEVVVSSMLKICTTIASVTVGRQIHGFALKSSQIRFDI 352
Query: 393 AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
A+ N+LIDMY+KSG++ DA F EM++K+V SWTSLIAGYG+HG+ + ++ LY +MEH
Sbjct: 353 ALGNSLIDMYAKSGDIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412
Query: 573 GLMPNDITFLSLLFACSHNGLTNEGWECFTNMVGKYNILPRAEHYSCMVDLFARGGQLEE 752
G+ PND+TFLSLL ACSH G T GW+ F M+ K+ I R EH+SC++D+ AR G LEE
Sbjct: 413 GIKPNDVTFLSLLSACSHTGQTELGWKIFNKMINKHGIKAREEHFSCIIDMLARSGYLEE 472
Query: 753 ACDLICKMQ--IKPNASLWGS 809
A +LI I ++S WG+
Sbjct: 473 AYELIRSKDGIISLSSSTWGA 493
Score = 102 bits (253), Expect = 1e-19
Identities = 63/195 (32%), Positives = 109/195 (55%)
Frame = +3
Query: 33 VMKMHGIVIKLGFQSFNILTGSLIDAYVKCGSVRSANNIYKSMLRVDTVSCTALITGYAR 212
++ +HG + GF S L LID Y+K G V+ A ++ + + D VS TA+I+ ++R
Sbjct: 31 LLLIHGNSVTNGFGSNLQLNDMLIDLYLKQGDVKHARKLFDRIPKRDVVSWTAMISRFSR 90
Query: 213 EGQNCIGAVELFNELRRMSLAIDNIILCSMLNICANLASLVLGRQIHAIAVKKYQSSHDM 392
G + A+ LF ++ R + + S+L C +L L G QI ++K + + ++
Sbjct: 91 CGYHR-DALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGMQIQG-CLEKGKCAGNL 148
Query: 393 AMSNALIDMYSKSGEMNDANQIFYEMEKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHN 572
+ +AL+ +Y++ G+M DA F M++++++SW S+I GY + DTS L++ M
Sbjct: 149 IVRSALLSLYARCGKMEDARLQFDSMKERDLVSWNSMIDGYTTNACVDTSFSLFQLMFAE 208
Query: 573 GLMPNDITFLSLLFA 617
G P+ TF SLL A
Sbjct: 209 GKKPDCFTFGSLLRA 223
Score = 69.7 bits (169), Expect = 7e-10
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Frame = +3
Query: 291 LCSMLNICANLASLVLGRQIHAIAVKKYQSSHDMAMSNALIDMYSKSGEMNDANQIFYEM 470
LCS N+ L IH +V S+ + +++ LID+Y K G++ A ++F +
Sbjct: 21 LCSYQNVKKQLLL------IHGNSVTNGFGSN-LQLNDMLIDLYLKQGDVKHARKLFDRI 73
Query: 471 EKKNVISWTSLIAGYGKHGDADTSLKLYKKMEHNGLMPNDITFLSLLFACSHNGLTNEGW 650
K++V+SWT++I+ + + G +L L+K+M + N T+ S+L +C G EG
Sbjct: 74 PKRDVVSWTAMISRFSRCGYHRDALLLFKQMHRQDVRANQFTYGSVLKSCKDLGCLKEGM 133
Query: 651 E---CFTNMVGKYNILPRAEHYSCMVDLFARGGQLEEA 755
+ C N++ R S ++ L+AR G++E+A
Sbjct: 134 QIQGCLEKGKCAGNLIVR----SALLSLYARCGKMEDA 167