BLASTX nr result
ID: Cnidium21_contig00025978
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00025978
(1533 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002529436.1| hypothetical protein RCOM_0545330 [Ricinus c... 122 3e-25
ref|XP_002524703.1| conserved hypothetical protein [Ricinus comm... 97 1e-17
ref|XP_002864982.1| F-box family protein [Arabidopsis lyrata sub... 83 2e-13
ref|NP_201386.1| F-box protein [Arabidopsis thaliana] gi|7517065... 71 7e-10
ref|XP_003570451.1| PREDICTED: putative F-box protein At5g52610-... 69 3e-09
>ref|XP_002529436.1| hypothetical protein RCOM_0545330 [Ricinus communis]
gi|223531113|gb|EEF32962.1| hypothetical protein
RCOM_0545330 [Ricinus communis]
Length = 376
Score = 122 bits (306), Expect = 3e-25
Identities = 106/371 (28%), Positives = 172/371 (46%), Gaps = 13/371 (3%)
Frame = +2
Query: 224 KRRKMDKSIVGNNIPYFGEGIISEILIFLDVKSLLICKSVCKLWYAIIRGNEFVEMHMTR 403
KR++ K P ++ EIL +L V L KSVC+ W +I+ FVE H++R
Sbjct: 32 KRKERKKLCFHTRNPELPIELVIEILSWLSVDCLTRFKSVCRQWCELIQDRYFVEKHLSR 91
Query: 404 NKGRFHL---YKRNGESLNSDGIMETYQYLSSINGLLLEKRKSSEHVKYRICNPSTKEIL 574
+ + YK NGE+++ ++S ++GL++E K S K RI N + K+I
Sbjct: 92 SNLFSYYQDGYKENGEAID---------WISKLDGLVVELNKISN--KVRIRNLAIKKIY 140
Query: 575 DIPYPNTRMYLLAMTIYLDSSTGLYNLASISSDK-KCNKFVFQVLDLGRPGNYLCYCEDL 751
D P P ++Y M I G Y S+ S K K ++ F++L +G E+
Sbjct: 141 DFPDPEHQIY--DMLIGFSRRCGYYKAVSLHSCKGKNHESGFEILTIGSE-------EEP 191
Query: 752 SWRTLNITEMDNLNEHGKFRFSTISSEVSMLYVLKTFKSGLGKPEIICVDLVQETHTNCI 931
SWRTL+ + + + +S E + Y ++T K GL EI+ DL E T+ I
Sbjct: 192 SWRTLDSAFFRDFDSQKEKLWSIRVDETA--YFVRTSKGGLEDYEIVSFDLNTECFTSSI 249
Query: 932 APESILHDRLGGVLFQLWQQKPTIVTLV--NDKLSVWVLEDYRKQKWSDKMLISLTYLNE 1105
P S L D V W+ K + + D+L V V +D +K KW+++ ++ L
Sbjct: 250 LPRSSLSDSNYSVFIIPWENKYLSIAELAKGDELRVLVFQDCKKGKWAEEKIVFPIPLKI 309
Query: 1106 YPRLKMVVPGFFHADGEDMLLYK-------FSSVCYVYKLESKEFSTVEPSTGKNIKVAD 1264
+ + PGF + E + ++ CY+Y + + ++ IK+
Sbjct: 310 FKK----APGFEIQNVEILQGFRNFFTFRVGGKKCYMYDIRRERIYSLATRQDNLIKIKQ 365
Query: 1265 TLVSLKGMRPE 1297
LV+ KGMRPE
Sbjct: 366 GLVAFKGMRPE 376
>ref|XP_002524703.1| conserved hypothetical protein [Ricinus communis]
gi|223536064|gb|EEF37722.1| conserved hypothetical
protein [Ricinus communis]
Length = 465
Score = 97.1 bits (240), Expect = 1e-17
Identities = 96/357 (26%), Positives = 159/357 (44%), Gaps = 19/357 (5%)
Frame = +2
Query: 284 IISEILIFLDVKSLLICKSVCKLWYAIIRGNEFVEMHMTRNKGRFHLYKRNGESLNSDGI 463
I EIL +L VKSL ICKSVCK WY++I F+ H++R+ L
Sbjct: 157 IYFEILTWLPVKSLAICKSVCKNWYSLIEDRYFLFRHLSRS------------PLVEVSF 204
Query: 464 METYQYLSSINGLLLEKRKSSEHVKYRICNPSTKEILDIPYP-----------NTRMYLL 610
+ L + GL+LE +S + K++I NP T+ +LD+P P N
Sbjct: 205 CPENEVLDVLCGLILE--QSDLNGKFQIRNPITRRVLDLPRPPGDVFDEILCWNNHAKEF 262
Query: 611 AMTIYLDS-STGLYNLASISSDKKCNKFVFQVLDL------GRPGNYLCYCEDLSWRTLN 769
+ ++ D+ + + A +S +K C V+++LDL GR + SWR +N
Sbjct: 263 KLVMFYDAFGSDIEACAVLSIEKDC---VWRILDLPYSWERGRTVSESVL--QPSWRVVN 317
Query: 770 ITEMDNLNEHGKFRFSTISSEVSMLYVLKTFKSGLGKPEIICVDLVQETHTNCIAPESIL 949
+ LNE G + + S +DL E + P+ L
Sbjct: 318 YVK---LNEDGSNFYYYVYS----------------------LDLETEKFYRTVLPKGFL 352
Query: 950 HDRLGGVLFQLWQQKPTIVTLVNDKLSVWVLEDYRKQKWSD-KMLISLTYLNEYPRLKMV 1126
+ + L W+ +V + L++ VLEDY+K KWS+ K+++ LT+L + K
Sbjct: 353 NPQQAKDL--CWKGCLAAYEIVKEVLNIMVLEDYKKGKWSETKIVLPLTFLQDNDYWKDT 410
Query: 1127 VPGFFHADGEDMLLYKFSSVCYVYKLESKEFSTVEPSTGKNIKVADTLVSLKGMRPE 1297
F D L++ +++ + Y +E + + P +I + LV++ GMRPE
Sbjct: 411 DEIFLDFAKFDELVFLYNNKQFTYNMELGKITREIPYKENSISLG--LVTISGMRPE 465
>ref|XP_002864982.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310817|gb|EFH41241.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 392
Score = 83.2 bits (204), Expect = 2e-13
Identities = 86/318 (27%), Positives = 136/318 (42%), Gaps = 27/318 (8%)
Frame = +2
Query: 197 RIFNGENNAKRRKMDKSIVGNNIPYFGEGIISEILIFLDVKSLLICKSVCKLWYAIIRGN 376
R+ ++R+K + + N++ +I EIL+ L KS+ C+ V KLW ++I
Sbjct: 12 RLTISTRRSRRKKTSPNGIENSVQ-IPVDLIIEILLRLQAKSIATCRCVSKLWGSVICRQ 70
Query: 377 EFVEMHMTRNKGRFHLY---KRNGESL------------NSDGIMETYQYLSS-----IN 496
+F E+ +TR+ R L K+NG NS I LSS +N
Sbjct: 71 DFTELFLTRSLHRPQLLFCCKKNGNLFFFSSPQLQNPYENSSAISLMNFSLSSKISRPVN 130
Query: 497 GLLLEKRKSSEHVKYRICNPSTKEILDIPYPNTRMYLLAMTIYLDSSTGLYNLASISSDK 676
GL+ KRK + ICNPST L++P P T + ++ +Y L S S++
Sbjct: 131 GLICFKRKETNETGTVICNPSTGHTLNLPKPATSIGAMSFLVYEPVEKQFKVLLSYESEE 190
Query: 677 KCNKFVFQVLDLGRPGNYLCYCEDLSWRTL--NITEMDNLNE---HGKFRFSTISSEVSM 841
QVL LG +LSWR + +I + L+E +G + I S
Sbjct: 191 ------HQVLTLG--------TGELSWRMIECSIPHIPGLSEICINGVLYYPAIDLS-SG 235
Query: 842 LYVLKTFKSGLGKPEIICV--DLVQETHTNCIAPESILHDRLGGVLFQLWQQKPTIVTLV 1015
Y++ F + K I V D ++ H + G L L ++ V
Sbjct: 236 DYIIVCFDARPEKFRFITVMEDFIKAAHDGILI-------NYNGKLASLVSERDCFVDGR 288
Query: 1016 NDKLSVWVLEDYRKQKWS 1069
+ + +WVL+D KQ+WS
Sbjct: 289 SKTIELWVLQDAEKQEWS 306
>ref|NP_201386.1| F-box protein [Arabidopsis thaliana]
gi|75170652|sp|Q9FHP3.1|FB300_ARATH RecName: Full=F-box
protein At5g65850 gi|9759569|dbj|BAB11132.1| unnamed
protein product [Arabidopsis thaliana]
gi|50253490|gb|AAT71947.1| At5g65850 [Arabidopsis
thaliana] gi|51972136|gb|AAU15172.1| At5g65850
[Arabidopsis thaliana] gi|332010731|gb|AED98114.1| F-box
protein [Arabidopsis thaliana]
Length = 392
Score = 71.2 bits (173), Expect = 7e-10
Identities = 86/314 (27%), Positives = 123/314 (39%), Gaps = 28/314 (8%)
Frame = +2
Query: 212 ENNAKRRKMDKSIVGNNIPYFGEGIISEILIFLDVKSLLICKSVCKLWYAIIRGNEFVEM 391
E K +KS+ IP II EIL+ L KS+ C+ V KLW ++I +F E+
Sbjct: 21 EKKTSPNKTEKSV---QIPV---DIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTEL 74
Query: 392 HMTRNKGRFHLY---KRNGE--SLNSDGIMETYQYLSSI---------------NGLLLE 511
+TR+ R L K++G +S + Y+ S+I NGL+
Sbjct: 75 FLTRSLHRPQLLFCCKKDGNLFFFSSPQLQNPYENSSAISLKNFSLCYKISRPVNGLICF 134
Query: 512 KRKSSEHVKYRICNPSTKEILDIPYP-NTRMYLLAMTIYLDSSTGLYNLASISSDKKCNK 688
KRK ICNPST L +P P T + +Y L S SD+
Sbjct: 135 KRKEMNETVTVICNPSTGHTLSLPKPMKTSIGPSRFFVYEPIQKQFKVLLSYKSDE---- 190
Query: 689 FVFQVLDLGRPGNYLCYCEDLSWRTLNITEMDNLNEHGKFRFSTISSEVSMLYVLKTFKS 868
QVL LG +LSWR + + L S I + Y S
Sbjct: 191 --HQVLTLG--------TGELSWRIIECSMPHILG------MSEICINGVLYYPAINLSS 234
Query: 869 GLGKPEIICVDLVQETHTNCIAPESIL---HD----RLGGVLFQLWQQKPTIVTLVNDKL 1027
G I+C D+ E E + HD G L L ++ V + +
Sbjct: 235 --GDYIIVCFDVRSEKFRFITVMEEFIKAAHDGTLINYNGKLASLVSERYCFVDGRSKSI 292
Query: 1028 SVWVLEDYRKQKWS 1069
+WVL+D K++WS
Sbjct: 293 ELWVLQDAEKKEWS 306
>ref|XP_003570451.1| PREDICTED: putative F-box protein At5g52610-like [Brachypodium
distachyon]
Length = 357
Score = 69.3 bits (168), Expect = 3e-09
Identities = 72/302 (23%), Positives = 126/302 (41%), Gaps = 26/302 (8%)
Frame = +2
Query: 284 IISEILIFLDVKSLLICKSVCKLWYAIIRGNEFVEMHMTRNKGRFHLY-----------K 430
II+EILI L VKSLL C+ VCK W++ I +E+H +++ + HL
Sbjct: 11 IINEILILLPVKSLLRCRCVCKAWHSAISSRHLIELHRQQSQSKVHLLHGSYDIPHGVNS 70
Query: 431 RNGESLNSDGIMETYQYLSSI-NGLLLEKRKS----SEHVKYRICNPSTKEILDIPYPNT 595
N E L + +E Y L + N +++ + + Y + NP+T+E++ +P+ +
Sbjct: 71 INIERLTEEDKLEDYYRLPLLENFVMINSCRDLICLAYDDGYLLSNPATRELVYVPHASW 130
Query: 596 RMYLLAMTIY-LDSSTGLYNLASISSDKKCNKFVFQV-LDLG--RPGNYLCYCEDLSWRT 763
+ T + SS G Y + SI+ VF V LD + + C +S RT
Sbjct: 131 DLDDTHFTGFGFVSSLGKYKVISITLGTPDTCEVFTVGLDCSWWKAESPPCPAFTVSGRT 190
Query: 764 ------LNITEMDNLNEHGKFRFSTISSEVSMLYVLKTFKSGLGKPEIICVDLVQETHTN 925
L++ D+ +E+GK + E + L + S P ++L +
Sbjct: 191 SYVNGNLHMLSQDSFDENGKLLLFNLEKEAWSVKPLPDWPSEFDWP----IELREMQGLL 246
Query: 926 CIAPESILHDRLGGVLFQLWQQKPTIVTLVNDKLSVWVLEDYRKQKWSDKMLISLTYLNE 1105
C I + ++++ +W+L DY WS +I +T +
Sbjct: 247 CF-----------------------ICCIPDNRIDIWILRDYANNVWSKGFVIDVTQVVG 283
Query: 1106 YP 1111
P
Sbjct: 284 MP 285