BLASTX nr result

ID: Cnidium21_contig00025937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025937
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACT22759.1| CONSTANS-like protein [Allium cepa]                     86   3e-15
ref|XP_002324491.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002533687.1| zinc finger protein, putative [Ricinus commu...    83   2e-14
emb|CAP09655.1| CONSTANS protein [Solanum tuberosum subsp. andig...    83   3e-14
ref|XP_002331677.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>gb|ACT22759.1| CONSTANS-like protein [Allium cepa]
          Length = 317

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 43/64 (67%), Positives = 48/64 (75%)
 Frame = -3

Query: 470 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRPENTDDVSRWFTSSQPTTNFMENSSFGV 291
           RKNRKFEKTIRYASRKAYAETRPRIKGRFAKR +N        +    +T FM +S +GV
Sbjct: 254 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRVDNDSYADPMHSVINASTAFMNDSGYGV 313

Query: 290 VPSF 279
           VPSF
Sbjct: 314 VPSF 317


>ref|XP_002324491.1| predicted protein [Populus trichocarpa] gi|222865925|gb|EEF03056.1|
           predicted protein [Populus trichocarpa]
          Length = 362

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -3

Query: 470 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRPENTDDVSRWFTSSQPTTNFMENSSFGV 291
           RKNRKFEKTIRYASRKAYAETRPRIKGRFAKR E   D+   + +S  +  FM ++ +GV
Sbjct: 300 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDMDNLY-NSPSSVPFMADTQYGV 358

Query: 290 VPSF 279
           VPSF
Sbjct: 359 VPSF 362


>ref|XP_002533687.1| zinc finger protein, putative [Ricinus communis]
           gi|223526413|gb|EEF28695.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 388

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = -3

Query: 470 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRPENTDDVSRWFTSSQPTTNFMENSSFGV 291
           RKNRKFEKTIRYASRKAYAETRPRIKGRFAKR E   D+ R + +S  + +++ ++ +GV
Sbjct: 326 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDTDMDRLY-NSPSSVSYLGDAQYGV 384

Query: 290 VPSF 279
           VP+F
Sbjct: 385 VPTF 388


>emb|CAP09655.1| CONSTANS protein [Solanum tuberosum subsp. andigenum]
          Length = 410

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -3

Query: 470 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRPENTDDVSRWFTSSQPTTNFMENSSFGV 291
           +KNRKFEKTIRYASRKAYAETRPRIKGRFAKR +   +V + F     +T  M +SS+G+
Sbjct: 352 KKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMF-----STQLMTDSSYGI 406

Query: 290 VPSF 279
           VPSF
Sbjct: 407 VPSF 410


>ref|XP_002331677.1| predicted protein [Populus trichocarpa] gi|222874096|gb|EEF11227.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 42/64 (65%), Positives = 50/64 (78%)
 Frame = -3

Query: 470 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRPENTDDVSRWFTSSQPTTNFMENSSFGV 291
           RKNRKFEKTIRYASRKAYAETRPRIKGRFAKR E   D+   + +S  +  F+ ++ +GV
Sbjct: 277 RKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMESDMDTLY-NSPSSVPFLADTHYGV 335

Query: 290 VPSF 279
           VPSF
Sbjct: 336 VPSF 339


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