BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025931
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containi...   614   e-173
ref|XP_002529286.1| pentatricopeptide repeat-containing protein,...   575   e-161
ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|2...   570   e-160
ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containi...   565   e-158
ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containi...   525   e-147

>ref|XP_002270184.2| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic [Vitis vinifera]
            gi|298204537|emb|CBI23812.3| unnamed protein product
            [Vitis vinifera]
          Length = 659

 Score =  614 bits (1584), Expect = e-173
 Identities = 315/495 (63%), Positives = 391/495 (78%), Gaps = 15/495 (3%)
 Frame = -1

Query: 1440 MDISCVFGNRFQPIILTHPPLNLI-----PYVSST-------TSVAVP--SESQFEHANV 1303
            M+IS V G  F+ +I    PL  +     P  S+T       TS   P   ESQ E  +V
Sbjct: 1    MEIS-VLGGGFKQVITRLSPLPSLSSPASPLPSTTRAKSSHLTSATPPLHKESQIEPTHV 59

Query: 1302 S-TKYTQNSPLSFKTRQNDAILDIQHSSDLGSALARSGGILRVEDLNTILRHFGKSQKLK 1126
            S T   +   + +K RQ+ AIL++Q SSDLGSALAR G +L+V+DLN ILRHFGK  + +
Sbjct: 60   SVTPRKRCHSVGYKARQS-AILEVQQSSDLGSALARLGDMLKVQDLNVILRHFGKLCRWQ 118

Query: 1125 ELSQLFAWMQRTRKISFASYSSYIKHMGKSLSPVKALEIYDSIKDESTRNHXXXXXXXXX 946
            +LSQLF WMQ+  KI+F+SYS+YIK MGKSL+P+KALEIY+SI+DES RN+         
Sbjct: 119  DLSQLFDWMQKHEKITFSSYSTYIKFMGKSLNPIKALEIYNSIQDESVRNNVSVCNSVLS 178

Query: 945  XXXXSGKYDSGVKLFHQMKRNGLNPDIVTYSTLLAGCSKIRNGYSKALDLVQELKYNGLI 766
                +GK+++ +KLFHQMK++GL PD VTYSTLLAGC K+++GYSKAL+LVQE++ + L 
Sbjct: 179  CLIRNGKFENSLKLFHQMKQDGLRPDAVTYSTLLAGCMKVKHGYSKALELVQEMERSRLP 238

Query: 765  MDSVTYGTLLNVCASNNQCEEAEKYFKNMKDEGHTPNIFHYGSLINAYSAKGNFKKADEL 586
            MDSV YGTLL VCASNN+C+EAE YF  MKDEGH PN+FHY SL+NAYSA G++KKAD L
Sbjct: 239  MDSVIYGTLLAVCASNNRCKEAENYFNQMKDEGHLPNVFHYSSLLNAYSADGDYKKADML 298

Query: 585  ILNMKDAGLVPNKVILTSLLKVYVKGGLFDKARELLNDLEALGHAQNEIPYCILMDGLAK 406
            + +MK AGLVPNKVILT+LLKVYV+GGLF+K+RELL +LE LG+A++E+PYC+LMDGLAK
Sbjct: 299  VQDMKSAGLVPNKVILTTLLKVYVRGGLFEKSRELLAELEDLGYAEDEMPYCLLMDGLAK 358

Query: 405  AGHIQEAKSVFDEMNEKHVKSDGYSYSIMISAFCRSGLLEEAKELVCQVEAKYKSYDVVM 226
            +  I EAKS+F+EM +K VKSDGY YSIMISAFCRSGLL+EAK+L    EA Y  YD+VM
Sbjct: 359  SRRILEAKSIFEEMKKKQVKSDGYCYSIMISAFCRSGLLKEAKQLARDFEATYDKYDLVM 418

Query: 225  LNTMLCAYCRVGEMENVMKMLKRMDELAITPDWNTFHILIKYFCKEKIYMLAYQTLEDMH 46
            LNTMLCAYCR GEME+VM+M+++MDELAI+PDWNTFHILIKYFCKEK+Y+LAY+T+EDMH
Sbjct: 419  LNTMLCAYCRAGEMESVMQMMRKMDELAISPDWNTFHILIKYFCKEKLYLLAYRTMEDMH 478

Query: 45   RKGHQPEEELCSSLI 1
             KGHQPEEELCSSLI
Sbjct: 479  NKGHQPEEELCSSLI 493


>ref|XP_002529286.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223531275|gb|EEF33118.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 672

 Score =  575 bits (1482), Expect = e-161
 Identities = 282/471 (59%), Positives = 361/471 (76%), Gaps = 22/471 (4%)
 Frame = -1

Query: 1347 SVAVPSESQFEHANVSTKYTQNSPLSFKTRQND----------------------AILDI 1234
            +++  + SQ   A +ST  T  +PL  +   N+                      AIL++
Sbjct: 34   TISRANNSQRSSAVLSTNTTTETPLLKQPHNNEQPPNGQFHVQRRHSKSYLARQAAILEV 93

Query: 1233 QHSSDLGSALARSGGILRVEDLNTILRHFGKSQKLKELSQLFAWMQRTRKISFASYSSYI 1054
            Q S DL SAL R G IL+ +DLN ILR+ GK  + ++LS+LF WMQ+  KIS +SY+SY+
Sbjct: 94   QQSPDLDSALRRLGAILKAQDLNVILRNLGKQSRWQDLSKLFDWMQQHSKISVSSYTSYM 153

Query: 1053 KHMGKSLSPVKALEIYDSIKDESTRNHXXXXXXXXXXXXXSGKYDSGVKLFHQMKRNGLN 874
            K MGKSL+P KALEIY+SI DES +N+             SGK+D  +KLFH+MK+NGL 
Sbjct: 154  KFMGKSLNPAKALEIYNSIADESVKNNVFICNSVLSCLVRSGKFDISLKLFHKMKQNGLT 213

Query: 873  PDIVTYSTLLAGCSKIRNGYSKALDLVQELKYNGLIMDSVTYGTLLNVCASNNQCEEAEK 694
            PD +TYSTLL+GC K ++GYSK LD VQELKYNGL MD+V YGT+L VCAS+N+CEEAE 
Sbjct: 214  PDTITYSTLLSGCIKAKDGYSKTLDFVQELKYNGLQMDTVIYGTILAVCASHNRCEEAES 273

Query: 693  YFKNMKDEGHTPNIFHYGSLINAYSAKGNFKKADELILNMKDAGLVPNKVILTSLLKVYV 514
            YF  MK+EGH PN+FHY SL+NAY++ GN+KKA+EL+ +MK  GLVPNKVI T+LLKVYV
Sbjct: 274  YFSQMKNEGHLPNVFHYSSLLNAYASSGNYKKAEELVQDMKSLGLVPNKVIWTTLLKVYV 333

Query: 513  KGGLFDKARELLNDLEALGHAQNEIPYCILMDGLAKAGHIQEAKSVFDEMNEKHVKSDGY 334
            +GGLF+K+++LL +LE LG+A++E+PYC+LMDGL+KAG + EA+S FDEM EK+VKSDGY
Sbjct: 334  RGGLFEKSQQLLLELETLGYAEDEMPYCLLMDGLSKAGRVDEARSFFDEMKEKNVKSDGY 393

Query: 333  SYSIMISAFCRSGLLEEAKELVCQVEAKYKSYDVVMLNTMLCAYCRVGEMENVMKMLKRM 154
            +YSIMISA+CR  LLEEAK+L  + EAKY  YDVV+LNTMLCAYCR G+ME+VM+ +++M
Sbjct: 394  AYSIMISAYCRGRLLEEAKQLAKEFEAKYDKYDVVILNTMLCAYCRAGDMESVMQTMRKM 453

Query: 153  DELAITPDWNTFHILIKYFCKEKIYMLAYQTLEDMHRKGHQPEEELCSSLI 1
            DELAI+P + TFHILIKYFCK+K+Y+LAYQT+EDMHRKGHQPEEELCS LI
Sbjct: 454  DELAISPSYCTFHILIKYFCKQKLYLLAYQTMEDMHRKGHQPEEELCSMLI 504


>ref|XP_002299667.1| predicted protein [Populus trichocarpa] gi|222846925|gb|EEE84472.1|
            predicted protein [Populus trichocarpa]
          Length = 562

 Score =  570 bits (1468), Expect = e-160
 Identities = 275/396 (69%), Positives = 331/396 (83%)
 Frame = -1

Query: 1188 ILRVEDLNTILRHFGKSQKLKELSQLFAWMQRTRKISFASYSSYIKHMGKSLSPVKALEI 1009
            +L+V+DLN ILR+FG+  + ++LSQLF WMQR  KIS +SYSSYIK MG SL+P KALEI
Sbjct: 1    MLKVQDLNIILRNFGEQCRWQDLSQLFDWMQRHNKISASSYSSYIKFMGTSLNPAKALEI 60

Query: 1008 YDSIKDESTRNHXXXXXXXXXXXXXSGKYDSGVKLFHQMKRNGLNPDIVTYSTLLAGCSK 829
            Y SI DEST+ +             + K+DS +K FH+MK NGL PD +TYSTLLAGC K
Sbjct: 61   YHSIPDESTKTNVFICNSLLRCLVRNTKFDSSMKFFHKMKNNGLTPDAITYSTLLAGCMK 120

Query: 828  IRNGYSKALDLVQELKYNGLIMDSVTYGTLLNVCASNNQCEEAEKYFKNMKDEGHTPNIF 649
            I++GYSKALDLVQEL YNGL MDS+ YGTLL VCASNN+CEEA+ YF  MKDEGH+PNIF
Sbjct: 121  IKDGYSKALDLVQELNYNGLQMDSIMYGTLLAVCASNNRCEEAQSYFNQMKDEGHSPNIF 180

Query: 648  HYGSLINAYSAKGNFKKADELILNMKDAGLVPNKVILTSLLKVYVKGGLFDKARELLNDL 469
            HY SL+NAYS+ GN+KKA+EL+ +MK +GLVPNKVILT+LLKVYV+GGLF+K+R+LL +L
Sbjct: 181  HYSSLLNAYSSDGNYKKAEELVQDMKSSGLVPNKVILTTLLKVYVRGGLFEKSRDLLVEL 240

Query: 468  EALGHAQNEIPYCILMDGLAKAGHIQEAKSVFDEMNEKHVKSDGYSYSIMISAFCRSGLL 289
            + LG A+NE+PYC+LMDGLAK G + EA+SVF+EM EK VKS GYSYSIMIS+FCR GL 
Sbjct: 241  DTLGFAKNEMPYCLLMDGLAKNGLLDEARSVFNEMKEKRVKSGGYSYSIMISSFCRGGLF 300

Query: 288  EEAKELVCQVEAKYKSYDVVMLNTMLCAYCRVGEMENVMKMLKRMDELAITPDWNTFHIL 109
            EEAKEL  + EAKY  YDVV+LNT+LCAYCR GE E+VM+ +++MDELAI+PD+NTFHIL
Sbjct: 301  EEAKELAEEFEAKYDKYDVVILNTILCAYCRTGEKESVMRTMRKMDELAISPDYNTFHIL 360

Query: 108  IKYFCKEKIYMLAYQTLEDMHRKGHQPEEELCSSLI 1
            IKYFCKEK+YMLAYQT+EDMHRKGHQP EELCSSLI
Sbjct: 361  IKYFCKEKLYMLAYQTMEDMHRKGHQPMEELCSSLI 396


>ref|XP_004141206.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Cucumis sativus]
          Length = 668

 Score =  565 bits (1456), Expect = e-158
 Identities = 277/458 (60%), Positives = 364/458 (79%), Gaps = 5/458 (1%)
 Frame = -1

Query: 1359 SSTTSVAV-PSESQFEHANVSTKYTQNSPL----SFKTRQNDAILDIQHSSDLGSALARS 1195
            + + SVA+ P E QF   + + K    +      S+  RQ+ AI  ++  S+L  ALAR 
Sbjct: 39   NQSNSVAILPKEPQFLPGSSNAKLINGAQKRHSKSYLERQS-AIAQVKDCSELAPALARY 97

Query: 1194 GGILRVEDLNTILRHFGKSQKLKELSQLFAWMQRTRKISFASYSSYIKHMGKSLSPVKAL 1015
            GG+L+ +DLN ILRHFG   + K+LSQLF WMQ T K + +SYSSYIK MG+ L+P+KAL
Sbjct: 98   GGLLKAQDLNVILRHFGMLSRWKDLSQLFEWMQETGKTNVSSYSSYIKFMGRGLNPLKAL 157

Query: 1014 EIYDSIKDESTRNHXXXXXXXXXXXXXSGKYDSGVKLFHQMKRNGLNPDIVTYSTLLAGC 835
            E+Y++I++ S +N              +GK+D+ VKLFHQMK +GL PD VTYST+L GC
Sbjct: 158  EVYNNIEEVSIKNSIFICNSILNCLVRNGKFDTSVKLFHQMKNDGLCPDTVTYSTMLTGC 217

Query: 834  SKIRNGYSKALDLVQELKYNGLIMDSVTYGTLLNVCASNNQCEEAEKYFKNMKDEGHTPN 655
             ++++GY+KA++L++EL+ NGL MD V+YGTL+ +CAS+N+ E+AE++F  M+ EGH+PN
Sbjct: 218  IRVKHGYAKAMELLKELQDNGLCMDCVSYGTLIAICASHNRLEDAERFFNQMRAEGHSPN 277

Query: 654  IFHYGSLINAYSAKGNFKKADELILNMKDAGLVPNKVILTSLLKVYVKGGLFDKARELLN 475
            +FHYGSL+NAYS  G++KKADELI +MK  GLVPNKVILT+LLKVYV+GGLF+K+R+LL+
Sbjct: 278  MFHYGSLLNAYSINGDYKKADELIEDMKLTGLVPNKVILTTLLKVYVRGGLFEKSRKLLS 337

Query: 474  DLEALGHAQNEIPYCILMDGLAKAGHIQEAKSVFDEMNEKHVKSDGYSYSIMISAFCRSG 295
            +LE+LG+ +NE+PYC+LMDGLAKAG I+EAK+VFDEM  K+VK+DGY++SIMISAFCR G
Sbjct: 338  ELESLGYGENEMPYCLLMDGLAKAGSIREAKTVFDEMKAKNVKTDGYAHSIMISAFCRGG 397

Query: 294  LLEEAKELVCQVEAKYKSYDVVMLNTMLCAYCRVGEMENVMKMLKRMDELAITPDWNTFH 115
            LLEEAK L    EA Y  YD+V+LNTMLCAYCR GEME+VM+ML++MD+LAI+PD+NTFH
Sbjct: 398  LLEEAKLLAKDFEATYDRYDIVILNTMLCAYCRAGEMESVMQMLRKMDDLAISPDYNTFH 457

Query: 114  ILIKYFCKEKIYMLAYQTLEDMHRKGHQPEEELCSSLI 1
            ILIKYF KEK+Y+L Y+TLEDMHRKGHQPEEELCSSLI
Sbjct: 458  ILIKYFFKEKLYLLCYRTLEDMHRKGHQPEEELCSSLI 495


>ref|XP_003531588.1| PREDICTED: pentatricopeptide repeat-containing protein At1g10910,
            chloroplastic-like [Glycine max]
          Length = 630

 Score =  525 bits (1353), Expect = e-147
 Identities = 263/464 (56%), Positives = 339/464 (73%), Gaps = 1/464 (0%)
 Frame = -1

Query: 1389 HPPLNLIPYVSSTTSVAVPSESQFEHANVSTKYTQNSPLSFKTRQNDAILDIQHSSDLGS 1210
            H P+     +S++ S   P    + ++         S  +F + +  A L+++++SDL S
Sbjct: 5    HSPIPSSLAISASVSTTEPHTQPYRNS-----VKLGSSKTFSSARKAATLEVRNASDLAS 59

Query: 1209 ALARSGGILRVEDLNTILRHFGKSQKLKELSQLFAWMQRTRKISFASYSSYIKHMGK-SL 1033
            ALAR G  L V+DLN  L HF KS K   +SQLF+WMQ   K+   SYS YI+ M   +L
Sbjct: 60   ALARVGDALTVKDLNAALYHFKKSNKFNHISQLFSWMQENNKLDALSYSHYIRFMASHNL 119

Query: 1032 SPVKALEIYDSIKDESTRNHXXXXXXXXXXXXXSGKYDSGVKLFHQMKRNGLNPDIVTYS 853
               K L++Y SI+++S + +               K++S + LF QMK +GL PD+VTY+
Sbjct: 120  DAAKMLQLYHSIQNQSAKINVLVCNSVLSCLIKKAKFNSALNLFQQMKLDGLLPDLVTYT 179

Query: 852  TLLAGCSKIRNGYSKALDLVQELKYNGLIMDSVTYGTLLNVCASNNQCEEAEKYFKNMKD 673
            TLLAGC KI NGY+KAL+L+QEL++N L MD V YGT++ VCASN + EEAE YF  MKD
Sbjct: 180  TLLAGCIKIENGYAKALELIQELQHNKLQMDGVIYGTIMAVCASNTKWEEAEYYFNQMKD 239

Query: 672  EGHTPNIFHYGSLINAYSAKGNFKKADELILNMKDAGLVPNKVILTSLLKVYVKGGLFDK 493
            EGHTPN++HY SLINAYSA GN+KKAD LI +MK  GLVPNKVILT+LLKVYVKGGLF+K
Sbjct: 240  EGHTPNVYHYSSLINAYSACGNYKKADMLIQDMKSEGLVPNKVILTTLLKVYVKGGLFEK 299

Query: 492  ARELLNDLEALGHAQNEIPYCILMDGLAKAGHIQEAKSVFDEMNEKHVKSDGYSYSIMIS 313
            +RELL +L++LG+A++E+PYCI MDGLAKAG I EAK +FDEM + HV+SDGY++SIMIS
Sbjct: 300  SRELLAELKSLGYAEDEMPYCIFMDGLAKAGQIHEAKLIFDEMMKNHVRSDGYAHSIMIS 359

Query: 312  AFCRSGLLEEAKELVCQVEAKYKSYDVVMLNTMLCAYCRVGEMENVMKMLKRMDELAITP 133
            AFCR+ L  EAK+L    E     YD+V+LN+MLCA+CRVGEME VM+ LK+MDELAI P
Sbjct: 360  AFCRAKLFREAKQLAKDFETTSNKYDLVILNSMLCAFCRVGEMERVMETLKKMDELAINP 419

Query: 132  DWNTFHILIKYFCKEKIYMLAYQTLEDMHRKGHQPEEELCSSLI 1
             +NTFHILIKYFC+EK+Y+LAY+T++DMH KGHQP EELCSSLI
Sbjct: 420  GYNTFHILIKYFCREKMYLLAYRTMKDMHSKGHQPVEELCSSLI 463