BLASTX nr result
ID: Cnidium21_contig00025904
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00025904 (373 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cu... 117 1e-24 ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis v... 103 2e-20 ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu... 100 1e-19 ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|2... 100 1e-19 ref|XP_003555813.1| PREDICTED: putative nuclease HARBI1-like [Gl... 95 7e-18 >ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus] gi|449513511|ref|XP_004164345.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus] Length = 392 Score = 117 bits (293), Expect = 1e-24 Identities = 61/98 (62%), Positives = 77/98 (78%) Frame = +2 Query: 80 MGPIRGLKRKERDINEEVEDNGGPSLTCLPSQPQSFDWWDHFSKRLTGSLSESKNSANFE 259 MGPIRG KRK++ + ++V+ N S + L SQ Q DWWD FS+R+TG LS+SKN+ FE Sbjct: 1 MGPIRGFKRKKK-VEKKVDQNVFASAS-LSSQLQPLDWWDEFSQRITGPLSQSKNT-KFE 57 Query: 260 LIFKISRRTFKYICSLVKDVMMAKFSSFTDINGQPLCL 373 +FKISR+TF YICSLVK+VMMAK SSFTD+NG+PL L Sbjct: 58 SVFKISRKTFSYICSLVKEVMMAKTSSFTDLNGKPLSL 95 >ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera] Length = 398 Score = 103 bits (256), Expect = 2e-20 Identities = 58/104 (55%), Positives = 70/104 (67%), Gaps = 6/104 (5%) Frame = +2 Query: 80 MGPIRGLKRK-----ERDINEEVEDNGGPSLTCLP-SQPQSFDWWDHFSKRLTGSLSESK 241 M P RGLKRK +R +VE+NG L P SQP DWWD FSKR+TG LS+S+ Sbjct: 1 MEPSRGLKRKRKRKRKRKAEAKVEENG---LATSPLSQPLPLDWWDDFSKRITGPLSQSR 57 Query: 242 NSANFELIFKISRRTFKYICSLVKDVMMAKFSSFTDINGQPLCL 373 S FE +FKISR+TF YICSLVK+ MMAK ++F+ NG PL L Sbjct: 58 LSLTFESVFKISRKTFNYICSLVKEDMMAKPANFSASNGNPLSL 101 >ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis] gi|223528380|gb|EEF30419.1| RNA binding protein, putative [Ricinus communis] Length = 591 Score = 100 bits (249), Expect = 1e-19 Identities = 50/96 (52%), Positives = 67/96 (69%) Frame = +2 Query: 80 MGPIRGLKRKERDINEEVEDNGGPSLTCLPSQPQSFDWWDHFSKRLTGSLSESKNSANFE 259 MGPIRGLKR+++ ++V+ N S Q Q+ DWWD FSKR+TG LS S+N+ FE Sbjct: 1 MGPIRGLKRRKK-AEKKVDQNVLASALSSLKQEQTLDWWDDFSKRITGPLSGSRNTKKFE 59 Query: 260 LIFKISRRTFKYICSLVKDVMMAKFSSFTDINGQPL 367 +FKISR+TF YICSLV + + A+ S+ T NG+PL Sbjct: 60 SVFKISRKTFNYICSLVNNDLKARQSNLTGTNGKPL 95 >ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|222850968|gb|EEE88515.1| predicted protein [Populus trichocarpa] Length = 407 Score = 100 bits (249), Expect = 1e-19 Identities = 57/104 (54%), Positives = 70/104 (67%), Gaps = 8/104 (7%) Frame = +2 Query: 80 MGPIRGLKRK---ERDINEEVEDNGGPSLTCLPS-QPQS---FDWWDH-FSKRLTGSLSE 235 MGPIRG KR+ E+ +++ V D S + L S QPQS DWWD FSKR+TG SE Sbjct: 1 MGPIRGFKRRKKAEKKVDQNVFDAASASASALSSLQPQSQRPLDWWDDDFSKRITGPSSE 60 Query: 236 SKNSANFELIFKISRRTFKYICSLVKDVMMAKFSSFTDINGQPL 367 S NS FE FKISR+TF YICSLVK+ + A+ S+FT NG+PL Sbjct: 61 SNNSKKFESFFKISRKTFNYICSLVKEDLRARQSNFTGSNGKPL 104 >ref|XP_003555813.1| PREDICTED: putative nuclease HARBI1-like [Glycine max] Length = 402 Score = 94.7 bits (234), Expect = 7e-18 Identities = 46/98 (46%), Positives = 65/98 (66%) Frame = +2 Query: 80 MGPIRGLKRKERDINEEVEDNGGPSLTCLPSQPQSFDWWDHFSKRLTGSLSESKNSANFE 259 MG IRG+K++++ N++ D + SFDWW HFS R++G L+ SKN FE Sbjct: 18 MGSIRGIKKRKKADNKDGPD----------ASATSFDWWHHFSLRISGPLARSKNIEKFE 67 Query: 260 LIFKISRRTFKYICSLVKDVMMAKFSSFTDINGQPLCL 373 +FKISR+TF YICSLV++ M+A+ S+F D+NG L L Sbjct: 68 SVFKISRKTFNYICSLVEEDMLARASNFVDLNGNRLSL 105