BLASTX nr result
ID: Cnidium21_contig00025883
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00025883 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts... 58 3e-13 ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of... 58 3e-13 ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts... 58 1e-12 ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putati... 57 1e-12 ref|XP_002326699.1| predicted protein [Populus trichocarpa] gi|2... 57 1e-12 >ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus] Length = 1268 Score = 57.8 bits (138), Expect(2) = 3e-13 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = +1 Query: 25 QVQYRMHPSLS*FPSNSLYEGTLQNGVTI 111 QVQYRMHPSLS FPSNS YEGTLQNGVTI Sbjct: 713 QVQYRMHPSLSEFPSNSFYEGTLQNGVTI 741 Score = 41.6 bits (96), Expect(2) = 3e-13 Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 4/38 (10%) Frame = +3 Query: 111 NERQSTCIDFP*LVPNRSMFFYVR----EMSLVGNFFL 212 NERQST IDFP VPNR MFFYV+ E+S G +L Sbjct: 742 NERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 779 >ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1 homolog [Cucumis sativus] Length = 1246 Score = 57.8 bits (138), Expect(2) = 3e-13 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = +1 Query: 25 QVQYRMHPSLS*FPSNSLYEGTLQNGVTI 111 QVQYRMHPSLS FPSNS YEGTLQNGVTI Sbjct: 713 QVQYRMHPSLSEFPSNSFYEGTLQNGVTI 741 Score = 41.6 bits (96), Expect(2) = 3e-13 Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 4/38 (10%) Frame = +3 Query: 111 NERQSTCIDFP*LVPNRSMFFYVR----EMSLVGNFFL 212 NERQST IDFP VPNR MFFYV+ E+S G +L Sbjct: 742 NERQSTGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 779 >ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis vinifera] gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera] Length = 1267 Score = 57.8 bits (138), Expect(2) = 1e-12 Identities = 27/29 (93%), Positives = 27/29 (93%) Frame = +1 Query: 25 QVQYRMHPSLS*FPSNSLYEGTLQNGVTI 111 QVQYRMHPSLS FPSNS YEGTLQNGVTI Sbjct: 704 QVQYRMHPSLSEFPSNSFYEGTLQNGVTI 732 Score = 40.0 bits (92), Expect(2) = 1e-12 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 4/38 (10%) Frame = +3 Query: 111 NERQSTCIDFP*LVPNRSMFFYVR----EMSLVGNFFL 212 NERQS+ IDFP VPNR MFFYV+ E+S G +L Sbjct: 733 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 770 >ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis] gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis] Length = 1280 Score = 57.4 bits (137), Expect(2) = 1e-12 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = +1 Query: 25 QVQYRMHPSLS*FPSNSLYEGTLQNGVTI 111 QVQYRMHPSLS FPSNS YEGTLQNGVT+ Sbjct: 726 QVQYRMHPSLSEFPSNSFYEGTLQNGVTV 754 Score = 40.0 bits (92), Expect(2) = 1e-12 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 4/38 (10%) Frame = +3 Query: 111 NERQSTCIDFP*LVPNRSMFFYVR----EMSLVGNFFL 212 NERQS+ IDFP VPNR MFFYV+ E+S G +L Sbjct: 755 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 792 >ref|XP_002326699.1| predicted protein [Populus trichocarpa] gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa] Length = 1256 Score = 57.4 bits (137), Expect(2) = 1e-12 Identities = 26/29 (89%), Positives = 27/29 (93%) Frame = +1 Query: 25 QVQYRMHPSLS*FPSNSLYEGTLQNGVTI 111 QVQYRMHPSLS FPSNS YEGTLQNGVT+ Sbjct: 701 QVQYRMHPSLSEFPSNSFYEGTLQNGVTV 729 Score = 40.0 bits (92), Expect(2) = 1e-12 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 4/38 (10%) Frame = +3 Query: 111 NERQSTCIDFP*LVPNRSMFFYVR----EMSLVGNFFL 212 NERQS+ IDFP VPNR MFFYV+ E+S G +L Sbjct: 730 NERQSSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYL 767