BLASTX nr result

ID: Cnidium21_contig00025872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025872
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Popu...    91   1e-16
ref|XP_003525415.1| PREDICTED: squamosa promoter-binding-like pr...    88   6e-16
ref|XP_003523155.1| PREDICTED: squamosa promoter-binding-like pr...    88   8e-16
ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like pr...    88   8e-16
gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]        87   1e-15

>ref|XP_002318746.1| hypothetical protein POPTRDRAFT_570289 [Populus trichocarpa]
           gi|222859419|gb|EEE96966.1| hypothetical protein
           POPTRDRAFT_570289 [Populus trichocarpa]
          Length = 346

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/86 (55%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
 Frame = -3

Query: 236 TRGDFSVDSKPGH--------LVEGDSVTVPRMMLSPSGSSKRARPRQLNNGVHTAMCLV 81
           T G FS+D K G         +V      V ++  SPSGS+KRAR    NNG   AMCLV
Sbjct: 55  TGGGFSIDLKLGRVGNSSDESMVNWKQPGVSKLESSPSGSTKRARGA--NNGTQVAMCLV 112

Query: 80  DGCNADLSICREYHRRHKVCEAHSKT 3
           DGCN+DLS CR+YHRRHKVCE HSKT
Sbjct: 113 DGCNSDLSTCRDYHRRHKVCELHSKT 138


>ref|XP_003525415.1| PREDICTED: squamosa promoter-binding-like protein 13-like isoform 1
           [Glycine max] gi|356513429|ref|XP_003525416.1|
           PREDICTED: squamosa promoter-binding-like protein
           13-like isoform 2 [Glycine max]
          Length = 390

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 50/89 (56%), Positives = 58/89 (65%), Gaps = 11/89 (12%)
 Frame = -3

Query: 236 TRGDFSVDSKPGHLVEG----------DSVTVPRMMLSP-SGSSKRARPRQLNNGVHTAM 90
           T+G+FSVD K G +             D+V V +M  S  SGSSKRAR   L+NG  T  
Sbjct: 37  TKGEFSVDLKLGQVGNSGTESVLTKSKDAVGVSKMTSSSTSGSSKRARA--LSNGTQTVS 94

Query: 89  CLVDGCNADLSICREYHRRHKVCEAHSKT 3
           CLVDGC+ADLS CR+YHRRHKVCE HSKT
Sbjct: 95  CLVDGCHADLSNCRDYHRRHKVCEVHSKT 123


>ref|XP_003523155.1| PREDICTED: squamosa promoter-binding-like protein 13-like [Glycine
           max]
          Length = 397

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/92 (55%), Positives = 59/92 (64%), Gaps = 15/92 (16%)
 Frame = -3

Query: 233 RGDFSVDSKPGHLVEGDSVT---------------VPRMMLSPSGSSKRARPRQLNNGVH 99
           +G+FSVD K GH V G+S T               V +M  SPSGSSKRAR   +N+   
Sbjct: 39  KGEFSVDLKLGHHV-GNSGTESALANKSKDAAAAGVSKMASSPSGSSKRARA--INSTSL 95

Query: 98  TAMCLVDGCNADLSICREYHRRHKVCEAHSKT 3
           T  CLVDGCN+DLS CR+YHRRHKVCE HSKT
Sbjct: 96  TVACLVDGCNSDLSNCRDYHRRHKVCELHSKT 127


>ref|XP_002280160.1| PREDICTED: squamosa promoter-binding-like protein 13 [Vitis
           vinifera] gi|147837620|emb|CAN77059.1| hypothetical
           protein VITISV_022138 [Vitis vinifera]
           gi|297734432|emb|CBI15679.3| unnamed protein product
           [Vitis vinifera]
          Length = 377

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 48/87 (55%), Positives = 53/87 (60%), Gaps = 9/87 (10%)
 Frame = -3

Query: 236 TRGDFSVDSKPGHLVEGDSVTVPRMMLS---------PSGSSKRARPRQLNNGVHTAMCL 84
           T GDFS+D K G +    S    ++            PSGSSKRAR    NNG  T  CL
Sbjct: 37  TGGDFSIDLKLGQVSNPSSDFADKLKEQKFSSIAAPLPSGSSKRARAT--NNGSQTVSCL 94

Query: 83  VDGCNADLSICREYHRRHKVCEAHSKT 3
           VDGCN+DLS CREYHRRHKVCE HSKT
Sbjct: 95  VDGCNSDLSNCREYHRRHKVCELHSKT 121


>gb|AGC92796.1| SBP-box transcription factor [Betula luminifera]
          Length = 389

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/84 (58%), Positives = 54/84 (64%), Gaps = 8/84 (9%)
 Frame = -3

Query: 230 GDFSVDSKPGHLVEG--DSVT------VPRMMLSPSGSSKRARPRQLNNGVHTAMCLVDG 75
           GDFSVD K G L     +SV       V ++  SPSGSSKRAR    NNG     CLVDG
Sbjct: 40  GDFSVDLKLGQLGNSGPESVNKWKEPGVSKIASSPSGSSKRARAA--NNGTQPVSCLVDG 97

Query: 74  CNADLSICREYHRRHKVCEAHSKT 3
           C +DLS CR+YHRRHKVCE HSKT
Sbjct: 98  CTSDLSNCRDYHRRHKVCELHSKT 121


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