BLASTX nr result

ID: Cnidium21_contig00025844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025844
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002519358.1| leucine-rich repeat-containing protein, puta...    55   8e-06

>ref|XP_002309943.1| predicted protein [Populus trichocarpa] gi|222852846|gb|EEE90393.1|
           predicted protein [Populus trichocarpa]
          Length = 451

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
 Frame = -3

Query: 450 CIVYKFKPGQERNFDLI-----FHNMTSNKMIVYHPACFGIPEDDEYMTWLSHWKFGSHE 286
           CIVY  +   ++   L        N T      Y+P  +G+P+  E M WLSHW+FG+ +
Sbjct: 323 CIVYGLRNTDKKCATLYPPDAEISNKTKVLKWSYNPIVYGVPQIGEDMLWLSHWRFGTDQ 382

Query: 285 MGSGDEVKISIFNHDNDHVFEVKEIGVHLVYEEQE 181
           +  GD+V +S     +   F+VK+ GVHLVYE+++
Sbjct: 383 LEVGDQVNVSASVTPD---FQVKKCGVHLVYEQED 414


>ref|XP_002519358.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223541425|gb|EEF42975.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1108

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/74 (41%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
 Frame = -3

Query: 396  HNMTSNKMIVYHPACFGIPEDD-EYMTWLSHWKFGSHEMGSGDEVKISIFNHDNDHVFEV 220
            +N T      Y P  + +PEDD E M WLS+WKFG  E   GD+V +S+        + V
Sbjct: 956  NNETKGTNWSYSPTFYALPEDDDEDMLWLSYWKFGG-EFEVGDKVNVSV---RMPFGYYV 1011

Query: 219  KEIGVHLVYEEQEE 178
            KE G+ +VYEE E+
Sbjct: 1012 KECGIRIVYEENEK 1025


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