BLASTX nr result

ID: Cnidium21_contig00025843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025843
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45350.1|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate ...   426   e-117
emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase p...   426   e-117
ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase...   369   e-100
ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reduct...   369   e-100
emb|CBI37680.3| unnamed protein product [Vitis vinifera]              359   3e-97

>sp|P45350.1|DRTS_DAUCA RecName: Full=Bifunctional dihydrofolate reductase-thymidylate
           synthase; Short=DHFR-TS; Includes: RecName:
           Full=Dihydrofolate reductase; Includes: RecName:
           Full=Thymidylate synthase gi|288615|emb|CAA78954.1|
           dihydrofolate reductase-thymidylate synthetase [Daucus
           carota]
          Length = 528

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/239 (88%), Positives = 218/239 (91%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   NVVICGSMISALELLAESPYCVSIEKVFVIGGGQIYREFLNAPGCDAVHITEIEEHIDCD 181
           NVVICGSMISALELLA SPYCVS+EKVFVIGGGQIYRE LNAPGCDAVHITEIEEHI+CD
Sbjct: 107 NVVICGSMISALELLAGSPYCVSVEKVFVIGGGQIYREALNAPGCDAVHITEIEEHIECD 166

Query: 182 TFIPPLDESVYRPWYSSFPLVENKIRYCFTTYVRVRNSV-ELTSQTXXXXXXXXXXXGNF 358
           TFIP LDESV++PWYSSFPLVENKIRYCFTTYVRVRNSV ELTSQT           GNF
Sbjct: 167 TFIPLLDESVFQPWYSSFPLVENKIRYCFTTYVRVRNSVAELTSQTNGCSSDSKSDSGNF 226

Query: 359 EIQKFSFLPKTVFEKHEEYLYLRLVENIISNGVAKNDRTHTGTVSIFGCQMRFNLRKSFP 538
           EIQ FSFLPKTVFEKHEEYLYL LVENIISNGV KNDRT TGTVSIFGCQMRFNLRKSFP
Sbjct: 227 EIQNFSFLPKTVFEKHEEYLYLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFP 286

Query: 539 LLTTKKVFWRGVVEELLWFISGSTNGKVLKEKGVHIWEGNGSRDYLDSIGLADREEGDL 715
           LLTTKKVFWRGVVEELLWFISGSTN K+LKEKGV+IWEGNGSR+YLDSIGL DREEGDL
Sbjct: 287 LLTTKKVFWRGVVEELLWFISGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDL 345


>emb|CAA05895.1| dihydrofolate reductase-thymidylate synthetase precursor [Daucus
           carota]
          Length = 577

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/239 (88%), Positives = 218/239 (91%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   NVVICGSMISALELLAESPYCVSIEKVFVIGGGQIYREFLNAPGCDAVHITEIEEHIDCD 181
           NVVICGSMISALELLA SPYCVS+EKVFVIGGGQIYRE LNAPGCDAVHITEIEEHI+CD
Sbjct: 156 NVVICGSMISALELLAGSPYCVSVEKVFVIGGGQIYREALNAPGCDAVHITEIEEHIECD 215

Query: 182 TFIPPLDESVYRPWYSSFPLVENKIRYCFTTYVRVRNSV-ELTSQTXXXXXXXXXXXGNF 358
           TFIP LDESV++PWYSSFPLVENKIRYCFTTYVRVRNSV ELTSQT           GNF
Sbjct: 216 TFIPLLDESVFQPWYSSFPLVENKIRYCFTTYVRVRNSVAELTSQTNGCSSDSKSDSGNF 275

Query: 359 EIQKFSFLPKTVFEKHEEYLYLRLVENIISNGVAKNDRTHTGTVSIFGCQMRFNLRKSFP 538
           EIQ FSFLPKTVFEKHEEYLYL LVENIISNGV KNDRT TGTVSIFGCQMRFNLRKSFP
Sbjct: 276 EIQNFSFLPKTVFEKHEEYLYLGLVENIISNGVTKNDRTRTGTVSIFGCQMRFNLRKSFP 335

Query: 539 LLTTKKVFWRGVVEELLWFISGSTNGKVLKEKGVHIWEGNGSRDYLDSIGLADREEGDL 715
           LLTTKKVFWRGVVEELLWFISGSTN K+LKEKGV+IWEGNGSR+YLDSIGL DREEGDL
Sbjct: 336 LLTTKKVFWRGVVEELLWFISGSTNAKILKEKGVNIWEGNGSREYLDSIGLTDREEGDL 394


>ref|XP_002306118.1| dihydrofolate reductase-thymidylate synthase [Populus trichocarpa]
           gi|222849082|gb|EEE86629.1| dihydrofolate
           reductase-thymidylate synthase [Populus trichocarpa]
          Length = 528

 Score =  369 bits (947), Expect = e-100
 Identities = 180/239 (75%), Positives = 203/239 (84%), Gaps = 1/239 (0%)
 Frame = +2

Query: 2   NVVICGSMISALELLAESPYCVSIEKVFVIGGGQIYREFLNAPGCDAVHITEIEEHIDCD 181
           NVVICGSM SALELLA SPYC+SIEKVFVIGGGQI RE LNAPGCDA+HITEIE   DCD
Sbjct: 108 NVVICGSMGSALELLAASPYCLSIEKVFVIGGGQILRESLNAPGCDAIHITEIETDFDCD 167

Query: 182 TFIPPLDESVYRPWYSSFPLVENKIRYCFTTYVRVRNS-VELTSQTXXXXXXXXXXXGNF 358
           TFIP +D SV++PWYSSFP VEN IR+CFTTYVRVR+S +E  SQ              F
Sbjct: 168 TFIPAIDTSVFQPWYSSFPKVENDIRHCFTTYVRVRSSTIESHSQNNGENSDGNSENSKF 227

Query: 359 EIQKFSFLPKTVFEKHEEYLYLRLVENIISNGVAKNDRTHTGTVSIFGCQMRFNLRKSFP 538
           E++KFSFLPK VFE+HEEYLYLR+V++IIS+G  K+DRT TGT+S FGCQMRFNLRK+FP
Sbjct: 228 EVKKFSFLPKMVFERHEEYLYLRMVQDIISDGNLKDDRTGTGTLSKFGCQMRFNLRKNFP 287

Query: 539 LLTTKKVFWRGVVEELLWFISGSTNGKVLKEKGVHIWEGNGSRDYLDSIGLADREEGDL 715
           LLTTKKVFWRGVVEELLWFISGST+ KVL+EKG+HIW+GN SR+YLDSIGL DREEGDL
Sbjct: 288 LLTTKKVFWRGVVEELLWFISGSTSAKVLQEKGIHIWDGNASREYLDSIGLKDREEGDL 346


>ref|XP_002280254.1| PREDICTED: bifunctional dihydrofolate reductase-thymidylate
           synthase-like [Vitis vinifera]
          Length = 524

 Score =  369 bits (946), Expect = e-100
 Identities = 181/238 (76%), Positives = 202/238 (84%)
 Frame = +2

Query: 2   NVVICGSMISALELLAESPYCVSIEKVFVIGGGQIYREFLNAPGCDAVHITEIEEHIDCD 181
           NVVICGSM SALELLA SPYC+SIEKVFVIGGGQI RE LNAPGCDA+HITEIE   +CD
Sbjct: 107 NVVICGSMASALELLAASPYCLSIEKVFVIGGGQILREALNAPGCDAIHITEIETSFECD 166

Query: 182 TFIPPLDESVYRPWYSSFPLVENKIRYCFTTYVRVRNSVELTSQTXXXXXXXXXXXGNFE 361
           TFIP +D  V++PWYSSFPLVEN IRY F TYVRVR+S +  SQ              FE
Sbjct: 167 TFIPAIDSLVFQPWYSSFPLVENNIRYSFMTYVRVRSSAD-ESQIQNNGDSGLESI-KFE 224

Query: 362 IQKFSFLPKTVFEKHEEYLYLRLVENIISNGVAKNDRTHTGTVSIFGCQMRFNLRKSFPL 541
           ++KFSFLPK +FE+HEEY+YLRLVE+IISNGV ++DRT TGT+S FGCQMRFNLRK+FPL
Sbjct: 225 VKKFSFLPKMIFERHEEYIYLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPL 284

Query: 542 LTTKKVFWRGVVEELLWFISGSTNGKVLKEKGVHIWEGNGSRDYLDSIGLADREEGDL 715
           LTTKKVFWRGVVEELLWFISGSTN KVL+EKG+HIW+GN SRDYLDSIGLADREEGDL
Sbjct: 285 LTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDL 342


>emb|CBI37680.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  359 bits (922), Expect = 3e-97
 Identities = 177/238 (74%), Positives = 195/238 (81%)
 Frame = +2

Query: 2   NVVICGSMISALELLAESPYCVSIEKVFVIGGGQIYREFLNAPGCDAVHITEIEEHIDCD 181
           NVVICGSM SALELLA SPYC+SIEKVFVIGGGQI RE LNAPGCDA+HITEIE   +CD
Sbjct: 213 NVVICGSMASALELLAASPYCLSIEKVFVIGGGQILREALNAPGCDAIHITEIETSFECD 272

Query: 182 TFIPPLDESVYRPWYSSFPLVENKIRYCFTTYVRVRNSVELTSQTXXXXXXXXXXXGNFE 361
           TFIP +D  V++PWYSSFPLVEN IRY F TYVRVR                        
Sbjct: 273 TFIPAIDSLVFQPWYSSFPLVENNIRYSFMTYVRVR------------------------ 308

Query: 362 IQKFSFLPKTVFEKHEEYLYLRLVENIISNGVAKNDRTHTGTVSIFGCQMRFNLRKSFPL 541
           I+KFSFLPK +FE+HEEY+YLRLVE+IISNGV ++DRT TGT+S FGCQMRFNLRK+FPL
Sbjct: 309 IKKFSFLPKMIFERHEEYIYLRLVEDIISNGVQRDDRTGTGTLSKFGCQMRFNLRKTFPL 368

Query: 542 LTTKKVFWRGVVEELLWFISGSTNGKVLKEKGVHIWEGNGSRDYLDSIGLADREEGDL 715
           LTTKKVFWRGVVEELLWFISGSTN KVL+EKG+HIW+GN SRDYLDSIGLADREEGDL
Sbjct: 369 LTTKKVFWRGVVEELLWFISGSTNAKVLQEKGIHIWDGNASRDYLDSIGLADREEGDL 426


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