BLASTX nr result

ID: Cnidium21_contig00025804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025804
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002520920.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250...    91   8e-17
ref|XP_004148571.1| PREDICTED: uncharacterized protein LOC101221...    90   2e-16

>ref|XP_002307170.1| predicted protein [Populus trichocarpa] gi|222856619|gb|EEE94166.1|
           predicted protein [Populus trichocarpa]
          Length = 336

 Score =  105 bits (263), Expect = 3e-21
 Identities = 65/135 (48%), Positives = 81/135 (60%), Gaps = 9/135 (6%)
 Frame = -3

Query: 380 SSEQTPPRRRHSDLFDSLQSLNMQSPDQSISPAMHSLRGYYNLTSLDEKTDSEG----CY 213
           S E+TPPR   SDLFDS QSL  +S    +SPAM SL+GYY L   D+K   EG     Y
Sbjct: 82  SYERTPPRGLQSDLFDSFQSLKPKSSRCKVSPAMSSLQGYYGLKPKDQKKIPEGFEMAVY 141

Query: 212 QKGGSHYLEDGPFGKPPPCMNRPASVHRKSKSIASDF-----KLGSAVLSDDVLVPESDK 48
           + G SH+ E GP+ KP P  + P S+HRK+KS+A+ F      L   +  D+V   ES+K
Sbjct: 142 RNGHSHHPEGGPYLKPSPASHPPLSLHRKTKSLANGFLDEKNGLVDKLYLDEVKEGESEK 201

Query: 47  WPGNLARRRQKSEAD 3
               L RRRQKSEAD
Sbjct: 202 ----LVRRRQKSEAD 212


>ref|XP_002310652.1| predicted protein [Populus trichocarpa] gi|222853555|gb|EEE91102.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 9/136 (6%)
 Frame = -3

Query: 383 QSSEQTPPRRRHSDLFDSLQSLNMQSPDQSISPAMHSLRGYYNLTSLDEKTDSEG----C 216
           +S EQTPPR   SD+FDS Q LN +S    +SPAM SL+GYY L   D+K  S+G     
Sbjct: 156 RSYEQTPPRGLQSDVFDSFQYLNPKSSQLKVSPAMSSLQGYYGLKPKDQKNTSKGFEMAV 215

Query: 215 YQKGGSHYLEDGPFGKPPPCMNRPASVHRKSKSIASDF-----KLGSAVLSDDVLVPESD 51
            + G SH+LE G + KP P  + P  +HRK++S  ++      +L + +  DD    ES+
Sbjct: 216 NRNGYSHHLEGGLYLKPSPASHPPLCLHRKTRSWVNELLDENNELVNKLFLDDAKEIESE 275

Query: 50  KWPGNLARRRQKSEAD 3
           K    L RRRQKSE D
Sbjct: 276 K----LVRRRQKSETD 287


>ref|XP_002520920.1| conserved hypothetical protein [Ricinus communis]
           gi|223539886|gb|EEF41465.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 398

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
 Frame = -3

Query: 380 SSEQTPPRRRHSDLFDSLQSLNMQSPDQSISPAMHSLRGYYNLTSLDEKTDSE---GCYQ 210
           S +Q P  R HSDLFDS QSL + S  Q +SPAM +L+GYY L  L +   S      Y+
Sbjct: 145 SRKQAPTYRAHSDLFDSFQSLRLNSSKQEVSPAMTTLQGYYGLKPLTDPMISNFETVDYR 204

Query: 209 KGGSHYLEDGPFGKPPPCMNRPASVHRKSKSIASDFKLGSAVLSDDVLVPES-----DKW 45
           KG  +Y +D  + +P P ++ P + HRKS+S+ + F      L+D+    E+     +KW
Sbjct: 205 KGDCNYQDDIQYLRPSPSLDTPLNRHRKSRSLVNGFLEEHNRLADNQHSTEARENNLEKW 264

Query: 44  PGNLARRRQKSEAD 3
              L RRRQKSEAD
Sbjct: 265 NEKLVRRRQKSEAD 278


>ref|XP_002277134.1| PREDICTED: uncharacterized protein LOC100250730 [Vitis vinifera]
           gi|297737940|emb|CBI27141.3| unnamed protein product
           [Vitis vinifera]
          Length = 398

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 9/141 (6%)
 Frame = -3

Query: 398 NESDAQSSEQTPPRRRHSDLFDSLQSLNMQSPDQS-ISPAMHSLRGYYNLTSLDEKTDSE 222
           +E+  ++S+ TP    H +LF++ QSL ++S  Q  +SPAM +L+GYY L   D++   +
Sbjct: 128 SETPQRNSDWTPTDSVHRNLFETFQSLRVKSSSQRPVSPAMSTLQGYYRLKPEDQRNAPK 187

Query: 221 G----CYQKGGSHYLEDGPFGKPPPCMNRPASVHRKSKSIASDFKLGSAVLSDDVLVPES 54
           G     Y+K  +HYLEDGPF K     N   S  RK +S+A+ F   +   +DD+ + E+
Sbjct: 188 GFEMAVYRKESAHYLEDGPFSKQSSISNPLLSRVRKCRSLANGFMPENGEAADDMTILEA 247

Query: 53  D----KWPGNLARRRQKSEAD 3
                +W   L RRRQKSE D
Sbjct: 248 KEGDYRWNEKLIRRRQKSETD 268


>ref|XP_004148571.1| PREDICTED: uncharacterized protein LOC101221951 [Cucumis sativus]
           gi|449527189|ref|XP_004170595.1| PREDICTED:
           uncharacterized protein LOC101228443 [Cucumis sativus]
          Length = 373

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
 Frame = -3

Query: 383 QSSEQTPPRRRHSDLFDSLQSLNMQSPDQSISPAMHSLRGYYNLTSLDEKTDSEG----C 216
           QSS +  P R  S+ F+S QSL ++S DQ +SPAM SL+GYY L   D+++ ++G     
Sbjct: 118 QSSAERSPNRLSSEFFESFQSLKLKSSDQRVSPAMSSLQGYYGLKPSDQRSRTDGLEMAV 177

Query: 215 YQKGGSHYLEDGP-FGKPPPCMNRPASVHRKSKSIASDFKLGSAVLSDDVLVPES----D 51
           Y KG SHYLED P +G            HRKSKS+ +        +SDDV   E+    +
Sbjct: 178 YMKGASHYLEDVPVYGTSQHLDFLLTHHHRKSKSLVNGCLGEKGEVSDDVQSIEAGDGDN 237

Query: 50  KWPGNLARRRQKSEAD 3
           K    L RRRQKS AD
Sbjct: 238 KLSDKLIRRRQKSVAD 253


Top