BLASTX nr result

ID: Cnidium21_contig00025795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025795
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENC...    60   2e-07
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]    60   2e-07
ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002267929.1| PREDICTED: protein SUPPRESSOR OF GENE SILENCING 3-like [Vitis
           vinifera]
          Length = 718

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
 Frame = +2

Query: 155 IRGGSGSKLPSAGSTESAKGKNVAEVSDRWADQVADRVSVVSLDSEQDGGWEEVARKPRN 334
           +R G G +L +  S  S K ++ +EV +   + +   V+ +SLDS QDG WE  +RK +N
Sbjct: 74  LRKGGGKQLAAGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKN 133

Query: 335 -------KSVGIQNSSAKVSGNPWTGAK-GPSNAWPGNKQPVNAW 445
                  KS   QNSS K  G P T  K G  +     K P N+W
Sbjct: 134 RAGSSAAKSWAPQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSW 178


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
 Frame = +2

Query: 155 IRGGSGSKLPSAGSTESAKGKNVAEVSDRWADQVADRVSVVSLDSEQDGGWEEVARKPRN 334
           +R G G +L +  S  S K ++ +EV +   + +   V+ +SLDS QDG WE  +RK +N
Sbjct: 311 LRKGGGKQLAAGASNASPKSRHASEVPNVGVEPLNQGVADISLDSAQDGEWEVYSRKSKN 370

Query: 335 -------KSVGIQNSSAKVSGNPWTGAK-GPSNAWPGNKQPVNAW 445
                  KS   QNSS K  G P T  K G  +     K P N+W
Sbjct: 371 RAGSSAAKSWAPQNSSTKAWGQPDTAQKLGMRSNDGSGKAPANSW 415


>ref|XP_002325710.1| predicted protein [Populus trichocarpa] gi|222862585|gb|EEF00092.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/105 (38%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
 Frame = +2

Query: 158 RGGSGSKLPSAGSTESAKGKNVAEVSDRWADQVADRVSVVSLDSEQDGG-WEEVARKPRN 334
           RGG       A ++ S+KGKNVAE S    +Q++  V+ + LDS QD G WE +A+K +N
Sbjct: 4   RGGGKPFGSGANTSLSSKGKNVAEASGPAVEQLSQGVADIGLDSVQDDGEWEVIAKKSKN 63

Query: 335 -------KSVGIQNSSAKVSGNPWTGAK-GPSNAWPGNKQPVNAW 445
                  K  G Q ++ K  GNP    K G  N     + P NAW
Sbjct: 64  RAGSSAAKPWGSQTTNNKAWGNPDVIQKLGMRNNGGSGRNPGNAW 108


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