BLASTX nr result

ID: Cnidium21_contig00025781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025781
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,...   102   3e-20
ref|XP_002316761.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267...    93   2e-17
emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]    93   2e-17

>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
           communis] gi|223531524|gb|EEF33355.1| Heterogeneous
           nuclear ribonucleoprotein 27C, putative [Ricinus
           communis]
          Length = 478

 Score =  102 bits (254), Expect = 3e-20
 Identities = 48/101 (47%), Positives = 70/101 (69%)
 Frame = -3

Query: 308 QDRGIGSAFSTENISYGNAENNLDLGGVGYARNSRGNMAPYSTSSFVAANSGYEGSFANL 129
           Q  G  SA+++ ++ YG+ +++  LGG  Y RN+  N AP   SSF  +NSGYEGS+ +L
Sbjct: 360 QGGGSASAYTSGSMGYGSGDSSYGLGGGAYGRNNGSNAAP--NSSFAGSNSGYEGSYGDL 417

Query: 128 YGSGSVYGDTTWRSSSPDLEGPRTFDYDLRNAVSEVTPRNA 6
           Y SGSVYGD+TWRS +P+LEG  +F Y L N  ++VT +++
Sbjct: 418 YRSGSVYGDSTWRSGTPELEGSGSFGYGLSNIAADVTAKSS 458


>ref|XP_002316761.1| predicted protein [Populus trichocarpa] gi|222859826|gb|EEE97373.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/101 (46%), Positives = 69/101 (68%)
 Frame = -3

Query: 308 QDRGIGSAFSTENISYGNAENNLDLGGVGYARNSRGNMAPYSTSSFVAANSGYEGSFANL 129
           Q  GI S +++ ++ YGN ++N   GG GYARNS  ++ P  TSSF  +  GYEGS+  L
Sbjct: 360 QGGGIASGYTSGSMGYGNGDSNYSFGGSGYARNSGASVPP--TSSFSGSIGGYEGSYGEL 417

Query: 128 YGSGSVYGDTTWRSSSPDLEGPRTFDYDLRNAVSEVTPRNA 6
           Y SGSVYGD+TWR++ P+L+G  +F Y L +  S+VT +++
Sbjct: 418 YRSGSVYGDSTWRTAIPELDGSGSFGYGLGDVASDVTTKSS 458


>ref|XP_002300356.1| predicted protein [Populus trichocarpa] gi|222847614|gb|EEE85161.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/101 (48%), Positives = 70/101 (69%)
 Frame = -3

Query: 308 QDRGIGSAFSTENISYGNAENNLDLGGVGYARNSRGNMAPYSTSSFVAANSGYEGSFANL 129
           Q RG  S ++T ++ YG+ +NN  L G GY RNS G  AP  TSSF  +  GYEGS+ +L
Sbjct: 360 QGRGSASGYTTGSMGYGSGDNNYGLSGAGYVRNS-GTGAP-PTSSFSGSAGGYEGSYGDL 417

Query: 128 YGSGSVYGDTTWRSSSPDLEGPRTFDYDLRNAVSEVTPRNA 6
           Y SGSVYGD+TW+S++P+L+G  +F Y L +  S+VT +++
Sbjct: 418 YRSGSVYGDSTWQSATPELDGCGSFGYGLGDVASDVTTKSS 458


>ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
          Length = 478

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = -3

Query: 302 RGIGSA--FSTENISYGNAENNLDLGGVGYARNSRGNMAPYSTSSFVAANSGYEGSFANL 129
           +G GSA  F++ +++YG+ +++  LGG GY RNS   +A  + SSF  +  GYEGS+  L
Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVA--AASSFAPSTGGYEGSYEEL 417

Query: 128 YGSGSVYGDTTWRSSSPDLEGPRTFDYDLRNAVSEVTPRNA 6
           Y SGSVY D+TWR+ + +L+GP +F Y L NA S+VT  +A
Sbjct: 418 YRSGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSA 458


>emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
          Length = 482

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = -3

Query: 302 RGIGSA--FSTENISYGNAENNLDLGGVGYARNSRGNMAPYSTSSFVAANSGYEGSFANL 129
           +G GSA  F++ +++YG+ +++  LGG GY RNS   +A  + SSF  +  GYEGS+  L
Sbjct: 360 QGGGSALGFTSGSLNYGSGDSSYGLGGGGYGRNSSTGVA--AASSFAPSTGGYEGSYEEL 417

Query: 128 YGSGSVYGDTTWRSSSPDLEGPRTFDYDLRNAVSEVTPRNA 6
           Y SGSVY D+TWR+ + +L+GP +F Y L NA S+VT  +A
Sbjct: 418 YRSGSVYNDSTWRTPTSELDGPGSFSYGLGNAASDVTANSA 458


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