BLASTX nr result
ID: Cnidium21_contig00025779
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00025779 (390 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] g... 58 9e-07 gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indi... 58 9e-07 ref|XP_003623924.1| F-box protein [Medicago truncatula] gi|35549... 58 9e-07 gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japo... 58 9e-07 ref|XP_003617899.1| F-box protein [Medicago truncatula] gi|35551... 56 3e-06 >ref|NP_001063316.2| Os09g0448100 [Oryza sativa Japonica Group] gi|255678938|dbj|BAF25230.2| Os09g0448100, partial [Oryza sativa Japonica Group] Length = 432 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/63 (47%), Positives = 40/63 (63%) Frame = +1 Query: 193 LPDELIFKILSWTCVISLFRCKSVCKSWLSMISKPEFMKTHLTNSLSKLPSILMITSKID 372 +PD+++F ILSW SL R KSVCK+W +MIS P F HL S + PSILM+ + Sbjct: 68 IPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECS-KRNPSILMVPGAYE 126 Query: 373 DEE 381 +E Sbjct: 127 KQE 129 >gb|EEC84673.1| hypothetical protein OsI_31582 [Oryza sativa Indica Group] Length = 459 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/63 (47%), Positives = 40/63 (63%) Frame = +1 Query: 193 LPDELIFKILSWTCVISLFRCKSVCKSWLSMISKPEFMKTHLTNSLSKLPSILMITSKID 372 +PD+++F ILSW SL R KSVCK+W +MIS P F HL S + PSILM+ + Sbjct: 95 IPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECS-KRNPSILMVPGAYE 153 Query: 373 DEE 381 +E Sbjct: 154 KQE 156 >ref|XP_003623924.1| F-box protein [Medicago truncatula] gi|355498939|gb|AES80142.1| F-box protein [Medicago truncatula] Length = 431 Score = 57.8 bits (138), Expect = 9e-07 Identities = 28/59 (47%), Positives = 41/59 (69%) Frame = +1 Query: 193 LPDELIFKILSWTCVISLFRCKSVCKSWLSMISKPEFMKTHLTNSLSKLPSILMITSKI 369 LPD+LI ++LS+ VI L R +SV KSW ++IS P F+K HL S ++ P ++ITS + Sbjct: 16 LPDDLIAEVLSFLPVIFLLRFRSVSKSWKTLISNPAFVKLHLKRSATQNPHFIVITSYV 74 >gb|EAZ44931.1| hypothetical protein OsJ_29572 [Oryza sativa Japonica Group] gi|215687326|dbj|BAG91874.1| unnamed protein product [Oryza sativa Japonica Group] gi|215697871|dbj|BAG92064.1| unnamed protein product [Oryza sativa Japonica Group] Length = 380 Score = 57.8 bits (138), Expect = 9e-07 Identities = 30/63 (47%), Positives = 40/63 (63%) Frame = +1 Query: 193 LPDELIFKILSWTCVISLFRCKSVCKSWLSMISKPEFMKTHLTNSLSKLPSILMITSKID 372 +PD+++F ILSW SL R KSVCK+W +MIS P F HL S + PSILM+ + Sbjct: 16 IPDDVMFNILSWLPSKSLIRFKSVCKAWHAMISSPCFTDAHLECS-KRNPSILMVPGAYE 74 Query: 373 DEE 381 +E Sbjct: 75 KQE 77 >ref|XP_003617899.1| F-box protein [Medicago truncatula] gi|355519234|gb|AET00858.1| F-box protein [Medicago truncatula] Length = 400 Score = 56.2 bits (134), Expect = 3e-06 Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +1 Query: 193 LPDELIFKILSWTCVISLFRCKSVCKSWLSMISKPEFMKTHLTNSL-SKLPSILMITSKI 369 LPDELI +ILSW V SL + K V SW ++IS P+F+K HL S + S L+ T ++ Sbjct: 23 LPDELITEILSWLPVKSLMQMKCVSISWNTLISNPKFVKIHLYRSTRNPYFSSLVFTPQL 82 Query: 370 DDEEYVH 390 DD + H Sbjct: 83 DDYSFTH 89