BLASTX nr result

ID: Cnidium21_contig00025768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025768
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24859.3| unnamed protein product [Vitis vinifera]              351   2e-94
ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycin...   342   9e-92
ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)...   340   3e-91
ref|XP_002313287.1| predicted protein [Populus trichocarpa] gi|2...   335   9e-90
gb|AFK35297.1| unknown [Lotus japonicus]                              333   2e-89

>emb|CBI24859.3| unnamed protein product [Vitis vinifera]
          Length = 250

 Score =  351 bits (900), Expect = 2e-94
 Identities = 178/254 (70%), Positives = 205/254 (80%), Gaps = 1/254 (0%)
 Frame = +3

Query: 15  SVGLKTLTLDFITKKPNNFIPFASMFRPFYSTTNKLFNSSLSARCCSSEIARDNCLPNGV 194
           S  LKTL        P +F    S+FRPF+   +++  +     C  S+   D+ LPNG 
Sbjct: 3   STSLKTLN----AIAPFHFRTRVSLFRPFF--LHQVHRNRFYPICSLSKRGSDSSLPNGA 56

Query: 195 GEAVKQVSVEKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVEPLGFQVDDTKLKRAGL 374
           GE V ++S  ++LQVVLVSPQIPGNTG IARTCAASAVGLHL+EPLGFQVDD KLKRAGL
Sbjct: 57  GERVAEISNNRLLQVVLVSPQIPGNTGTIARTCAASAVGLHLIEPLGFQVDDAKLKRAGL 116

Query: 375 DYWPYVVVKVHSSWEEFREYFRQQKGEKRLLAFTKRGTSIHSDFSYRRGDWLVFGAETFG 554
           DYWPYVVVKVH SW EFREYFRQQ+GEKRLLAFTKRGT+IHSDFSYR+GDWL+FG+ET G
Sbjct: 117 DYWPYVVVKVHDSWAEFREYFRQQEGEKRLLAFTKRGTNIHSDFSYRKGDWLIFGSETCG 176

Query: 555 LPAEALLDCKNEPLGGGTIRIPMVETYVRCLNLSVSVGISLYEACRQLNYEQLQ-TTEPY 731
           LP EALLDCK+E LGGGTIRIPMVETYVRCLNLSVSVGI+LYEA RQLNYEQLQ  ++P 
Sbjct: 177 LPPEALLDCKSEALGGGTIRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQLQFPSDPP 236

Query: 732 VDNQKSFVSEDVFA 773
            D+ KSF++ED+FA
Sbjct: 237 TDSSKSFLTEDIFA 250


>ref|NP_001239897.1| uncharacterized protein LOC100813874 [Glycine max]
           gi|255638690|gb|ACU19650.1| unknown [Glycine max]
          Length = 260

 Score =  342 bits (876), Expect = 9e-92
 Identities = 174/255 (68%), Positives = 203/255 (79%), Gaps = 6/255 (2%)
 Frame = +3

Query: 27  KTLTLDFITKKPNNFIPFASM----FRPFYSTTNKLFNSSLSARCCSSEIARDNCLPNGV 194
           K+L + F T  P+ F PF       F+PF + ++  F S  S    +   +++  LP GV
Sbjct: 7   KSLNIPFPTF-PSKFSPFRPFSFFHFKPFRTPSSPRFISHCSLNGSAEITSKEGTLPRGV 65

Query: 195 GEAVKQVSVEKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVEPLGFQVDDTKLKRAGL 374
           GEAV + S  KILQVVLVSPQIPGNTGCIARTCAASAVGLHLV PLGFQVDDTKLKRAGL
Sbjct: 66  GEAVNEASSSKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGFQVDDTKLKRAGL 125

Query: 375 DYWPYVVVKVHSSWEEFREYFRQQKGEKRLLAFTKRGTSIHSDFSYRRGDWLVFGAETFG 554
           DYWPYVVVK+H SWE+F  YFRQQ+GEKRLLAFTKRGT IHS+FSYR+GD+L+FG+ET G
Sbjct: 126 DYWPYVVVKIHDSWEDFHNYFRQQEGEKRLLAFTKRGTKIHSEFSYRKGDYLIFGSETSG 185

Query: 555 LPAEALLDCKNEPLGGGTIRIPMVETYVRCLNLSVSVGISLYEACRQLNYEQLQT-TEPY 731
           LP EALLDCK EP GGGTI+IPMVETYVRCLNLSVSVGI+LYEA RQLNYE LQ  +E  
Sbjct: 186 LPPEALLDCKTEPFGGGTIKIPMVETYVRCLNLSVSVGIALYEASRQLNYESLQVPSESC 245

Query: 732 VD-NQKSFVSEDVFA 773
           +D  ++SF++ED+FA
Sbjct: 246 IDTTEESFIAEDIFA 260


>ref|XP_003633573.1| PREDICTED: putative tRNA (cytidine(34)-2'-O)-methyltransferase-like
           [Vitis vinifera]
          Length = 292

 Score =  340 bits (871), Expect = 3e-91
 Identities = 164/202 (81%), Positives = 183/202 (90%), Gaps = 1/202 (0%)
 Frame = +3

Query: 171 DNCLPNGVGEAVKQVSVEKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVEPLGFQVDD 350
           D+ LPNG GE V ++S  ++LQVVLVSPQIPGNTG IARTCAASAVGLHL+EPLGFQVDD
Sbjct: 91  DSSLPNGAGERVAEISNNRLLQVVLVSPQIPGNTGTIARTCAASAVGLHLIEPLGFQVDD 150

Query: 351 TKLKRAGLDYWPYVVVKVHSSWEEFREYFRQQKGEKRLLAFTKRGTSIHSDFSYRRGDWL 530
            KLKRAGLDYWPYVVVKVH SW EFREYFRQQ+GEKRLLAFTKRGT+IHSDFSYR+GDWL
Sbjct: 151 AKLKRAGLDYWPYVVVKVHDSWAEFREYFRQQEGEKRLLAFTKRGTNIHSDFSYRKGDWL 210

Query: 531 VFGAETFGLPAEALLDCKNEPLGGGTIRIPMVETYVRCLNLSVSVGISLYEACRQLNYEQ 710
           +FG+ET GLP EALLDCK+E LGGGTIRIPMVETYVRCLNLSVSVGI+LYEA RQLNYEQ
Sbjct: 211 IFGSETCGLPPEALLDCKSEALGGGTIRIPMVETYVRCLNLSVSVGIALYEASRQLNYEQ 270

Query: 711 LQ-TTEPYVDNQKSFVSEDVFA 773
           LQ  ++P  D+ KSF++ED+FA
Sbjct: 271 LQFPSDPPTDSSKSFLTEDIFA 292


>ref|XP_002313287.1| predicted protein [Populus trichocarpa] gi|222849695|gb|EEE87242.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  335 bits (859), Expect = 9e-90
 Identities = 180/266 (67%), Positives = 209/266 (78%), Gaps = 10/266 (3%)
 Frame = +3

Query: 6   MEASVGLKTLTLDFITKKPNNFIPFASMFRPF-YSTTNKLFNSSL------SARCCSSEI 164
           M+ S  LKTL +   T  P NF   AS+ RPF  S   K FN SL      S  C  S  
Sbjct: 1   MDTSRSLKTLNIT--TPLPFNFRSRASLLRPFCLSQLKKHFNPSLPLSQCYSPFCSQSGR 58

Query: 165 ARDNCLPNGVGEAVKQVSV-EKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVEPLGFQ 341
              N LP+GVG+ V +VS  +K+LQVVLVSPQIPGNTGCIARTCAA++VGLHLV PLGFQ
Sbjct: 59  GNGNSLPDGVGKGVNEVSRNKKLLQVVLVSPQIPGNTGCIARTCAATSVGLHLVGPLGFQ 118

Query: 342 VDDTKLKRAGLDYWPYVVVKVHSSWEEFREYFRQQKGEKRLLAFTKRGTSIHSDFSYRRG 521
           VDD KLKRAGLDYWPYVVVKVH SW EF++YFRQQ+G+KRLLAFTKRGT+ HS+FSYR+G
Sbjct: 119 VDDAKLKRAGLDYWPYVVVKVHDSWAEFQDYFRQQEGDKRLLAFTKRGTTTHSEFSYRKG 178

Query: 522 DWLVFGAETFGLPAEALLDCKNEPLGGGTIRIPMVETYVRCLNLSVSVGISLYEACRQLN 701
           D+LVFG+ET GLP EALLDCK+E  GGG IRIPMVETYVRCLNLSVSVGI+LYEA RQLN
Sbjct: 179 DYLVFGSETSGLPPEALLDCKSEMFGGGMIRIPMVETYVRCLNLSVSVGIALYEASRQLN 238

Query: 702 YEQLQ-TTEPYVD-NQKSFVSEDVFA 773
           YEQLQ  +E +V+  ++SF++ED+FA
Sbjct: 239 YEQLQFPSEDFVNGGEQSFITEDIFA 264


>gb|AFK35297.1| unknown [Lotus japonicus]
          Length = 259

 Score =  333 bits (855), Expect = 2e-89
 Identities = 167/259 (64%), Positives = 205/259 (79%), Gaps = 8/259 (3%)
 Frame = +3

Query: 21  GLKTLTLDFITKKPNNFIPFASMFRPFYSTTNKLFNSSLSARCCS-------SEIARDNC 179
           GLK+L +      P  F    S+FRP +++ +    +  S R CS       +E +++  
Sbjct: 5   GLKSLNMG----NPFRFRSKVSLFRPLFTSLHFKPITHFSPRLCSFCSLNGSAETSKEGS 60

Query: 180 LPNGVGEAVKQVSVEKILQVVLVSPQIPGNTGCIARTCAASAVGLHLVEPLGFQVDDTKL 359
           LP GVG AVK+ S  +ILQVVLVSPQIPGNTGCIARTCAASAVGLHLV PLG++VDDTKL
Sbjct: 61  LPQGVGGAVKEASHSRILQVVLVSPQIPGNTGCIARTCAASAVGLHLVGPLGYKVDDTKL 120

Query: 360 KRAGLDYWPYVVVKVHSSWEEFREYFRQQKGEKRLLAFTKRGTSIHSDFSYRRGDWLVFG 539
           KRAGLDYWPYVVVK+H+SWE+FR+YFRQQ+GEKRLLAFTKRGT IHS+FSY++GD+L+FG
Sbjct: 121 KRAGLDYWPYVVVKIHNSWEDFRDYFRQQEGEKRLLAFTKRGTKIHSEFSYKKGDYLLFG 180

Query: 540 AETFGLPAEALLDCKNEPLGGGTIRIPMVETYVRCLNLSVSVGISLYEACRQLNYEQLQ- 716
           AET GLP EALLDCK +P GGGT++IPMVETYVRCLNLSVSVGI+LYEA RQLNYEQ Q 
Sbjct: 181 AETTGLPPEALLDCKTKPFGGGTLKIPMVETYVRCLNLSVSVGIALYEASRQLNYEQFQI 240

Query: 717 TTEPYVDNQKSFVSEDVFA 773
            +E  +  +++ ++ED+ A
Sbjct: 241 PSETCIPTEETLITEDILA 259


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