BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025767
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308726.1| glutamate-gated kainate-type ion channel rec...    68   7e-10
ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glyc...    68   9e-10
ref|XP_002308723.1| glutamate-gated kainate-type ion channel rec...    64   1e-08
ref|XP_002336577.1| glutamate-gated kainate-type ion channel rec...    64   1e-08
ref|XP_002336789.1| glutamate-gated kainate-type ion channel rec...    63   2e-08

>ref|XP_002308726.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222854702|gb|EEE92249.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 324

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 43/97 (44%), Positives = 55/97 (56%)
 Frame = -1

Query: 340 TGGFGFAFPEGSPLSKPISKAILDVMEKGTIQQIGKNYFGVGYTSQYAGEDISRDSPSLT 161
           TGGFGF FP+GSPL   IS+AIL+V E   ++QI   +FG   T   +G  IS  S SL+
Sbjct: 146 TGGFGFVFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKNSTCPESGSSIS--SNSLS 203

Query: 160 AYSFAGLFTITAFLTLVAVVCSECSFAISRYRNRNAV 50
             SF GLF I     L+A++     F    YR RN +
Sbjct: 204 LKSFWGLFLIAGLAALLALIIFIVMFV---YRERNVL 237


>ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
          Length = 482

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 37/81 (45%), Positives = 50/81 (61%)
 Frame = -1

Query: 334 GFGFAFPEGSPLSKPISKAILDVMEKGTIQQIGKNYFGVGYTSQYAGEDISRDSPSLTAY 155
           GFGFAFP  S L+   S+AIL V E   + +I + YFG     + +  +IS  +PSL  +
Sbjct: 358 GFGFAFPLNSNLTTHFSRAILKVTESELMNEIERKYFGKKDIEEDSSAEISSAAPSLNFH 417

Query: 154 SFAGLFTITAFLTLVAVVCSE 92
           SFAGLF IT   TL+A++ SE
Sbjct: 418 SFAGLFLITGISTLLALMVSE 438


>ref|XP_002308723.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222854699|gb|EEE92246.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 866

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/97 (42%), Positives = 54/97 (55%)
 Frame = -1

Query: 340  TGGFGFAFPEGSPLSKPISKAILDVMEKGTIQQIGKNYFGVGYTSQYAGEDISRDSPSLT 161
            TGGFGF FP+GSPL   IS+AIL+V E   ++QI   +FG   T   +   IS  S SL+
Sbjct: 752  TGGFGFVFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSIS--SNSLS 809

Query: 160  AYSFAGLFTITAFLTLVAVVCSECSFAISRYRNRNAV 50
              SF GLF +     L+A++     F    YR RN +
Sbjct: 810  LKSFWGLFLLAGLAALLALIIFIVMFV---YRERNVL 843


>ref|XP_002336577.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222836230|gb|EEE74651.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 387

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 41/97 (42%), Positives = 54/97 (55%)
 Frame = -1

Query: 340 TGGFGFAFPEGSPLSKPISKAILDVMEKGTIQQIGKNYFGVGYTSQYAGEDISRDSPSLT 161
           TGGFGF FP+GSPL   IS+AIL+V E   ++QI   +FG   T   +   IS  S SL+
Sbjct: 204 TGGFGFVFPKGSPLVPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSIS--SNSLS 261

Query: 160 AYSFAGLFTITAFLTLVAVVCSECSFAISRYRNRNAV 50
             SF GLF +     L+A++     F    YR RN +
Sbjct: 262 LKSFWGLFLLAGLAALLALIIFIVMFV---YRERNVL 295


>ref|XP_002336789.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222836912|gb|EEE75305.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 452

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 41/97 (42%), Positives = 53/97 (54%)
 Frame = -1

Query: 340 TGGFGFAFPEGSPLSKPISKAILDVMEKGTIQQIGKNYFGVGYTSQYAGEDISRDSPSLT 161
           TGG GF FP+GSPL   IS+AIL+V E   ++QI   +FG   T   +   IS  S SL+
Sbjct: 255 TGGLGFVFPKGSPLMPDISRAILNVTEGDEMKQIEGAWFGKKSTCPESSSSIS--SNSLS 312

Query: 160 AYSFAGLFTITAFLTLVAVVCSECSFAISRYRNRNAV 50
             SF GLF I     L+A++     F    YR RN +
Sbjct: 313 LKSFWGLFLIAGLAALLALIIFIVMFV---YRERNVL 346