BLASTX nr result

ID: Cnidium21_contig00025685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025685
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533470.1| protein with unknown function [Ricinus commu...    72   5e-11
emb|CBI27143.3| unnamed protein product [Vitis vinifera]               66   3e-09

>ref|XP_002533470.1| protein with unknown function [Ricinus communis]
           gi|223526663|gb|EEF28902.1| protein with unknown
           function [Ricinus communis]
          Length = 200

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = +3

Query: 141 NICKRILRNPAVYRYCSLDCKL---YKCNKKWVVCKKPLPDNSKGAPLANTSSACATCKR 311
           ++ K ++   A+ +Y  +DC     YKCNK+ V+   PLP      PL NT   C  CKR
Sbjct: 81  HVYKDVVSLGAMDKY--IDCSQIQPYKCNKRLVISLNPLPHCG---PLLNTG-VCDVCKR 134

Query: 312 ILYDPDLYSYCSLDCKVQAFSRKLRATDPPFLKI 413
            L +P+ Y YCS+ CKV+AF RK    DPPFL I
Sbjct: 135 RLAEPEHYCYCSISCKVRAFGRKSSDLDPPFLSI 168


>emb|CBI27143.3| unnamed protein product [Vitis vinifera]
          Length = 114

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
 Frame = +3

Query: 192 LDCKL---YKCNKKWVVCKKPLPDNSKGAPLANTSSACATCKRILYDPDLYSYCSLDCKV 362
           +DC     Y+CN K V+   PLP + +     N+   C  C RI++ P +Y+YCS+ CKV
Sbjct: 5   IDCSQIQPYRCNGKKVLAVNPLPHSGREL---NSGEMCKVCHRIIFKPSIYTYCSISCKV 61

Query: 363 QAFSRKLRATDPPFL 407
            A S  L ++DPP+L
Sbjct: 62  AAVSTNLTSSDPPYL 76


Top