BLASTX nr result

ID: Cnidium21_contig00025660 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025660
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337688.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_002533784.1| pentatricopeptide repeat-containing protein,...    55   8e-06

>ref|XP_002337688.1| predicted protein [Populus trichocarpa] gi|222869559|gb|EEF06690.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 301 GDGGVIEKELEFKPSFDEYLKAMESVQSVRDKRRVAKNKIKK 426
           G GGVIEKE EFKPSF EYLKAMESV++ R+K +V K+   K
Sbjct: 22  GSGGVIEKEFEFKPSFGEYLKAMESVKTGREKNQVHKSNSSK 63


>ref|XP_002533784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526285|gb|EEF28597.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 856

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/42 (61%), Positives = 35/42 (83%), Gaps = 3/42 (7%)
 Frame = +1

Query: 307 GGVIEKELEFKPSFDEYLKAMESVQ---SVRDKRRVAKNKIK 423
           GG++EKELEFKPSFDEYLKAMESV+   + +  R+++ NK+K
Sbjct: 25  GGILEKELEFKPSFDEYLKAMESVKTGITKKHTRKLSGNKVK 66


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