BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025656
         (973 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40152.3| unnamed protein product [Vitis vinifera]              229   6e-58
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E sub...   229   6e-58
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   223   5e-56
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   223   5e-56
ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|2...   207   3e-51

>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score =  229 bits (585), Expect = 6e-58
 Identities = 116/263 (44%), Positives = 161/263 (61%), Gaps = 7/263 (2%)
 Frame = +1

Query: 115  QSQWSQK------DDNVDSSNWNKDTQVDETPTPGSWGVKXXXXXXXXXXXXXXKKPDKA 276
            QSQW+Q+      D +  S  W    + ++ P+   WG                   +  
Sbjct: 1629 QSQWNQRGSAVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGH-----------ESE 1677

Query: 277  DDSQWSKKDSQPDRARGLGSSSGWTKKEGWSSSNAGEGRPKSNRPFKPVGGTSSEFVPAP 456
              SQW +   +  R  G           GW S+N  E + K NRP KP G  + ++    
Sbjct: 1678 TQSQWGQPSGKKSRPEG---------SRGWGSNNT-EWKNKKNRPNKPQGPLNDDYSAGG 1727

Query: 457  M-TATGRRLDLFTADEQELLTEIEPIMQSMRKIMSQPGYNEGDPLATDDQAYIVDHVFKY 633
            + TAT +R+D+FT++EQ++L ++EPIMQS+R+IM Q GYN+GDPL+ DDQ+YI+D VF  
Sbjct: 1728 IFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNN 1787

Query: 634  HPDKVAKMGAGIDYVMINKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENFMKEKFPDRGE 813
            HPDK  KMG GIDYVM+++HSSF ++RC Y+VSTDG KEDFSYRKCLENF+KEK+PD  E
Sbjct: 1788 HPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAE 1847

Query: 814  AFMAKYFVKRDQQPRPGWNKDRN 882
             F+ KYF    ++PR G N++R+
Sbjct: 1848 TFIGKYF----RRPRAGGNRERS 1866


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase E subunit 1 [Vitis vinifera]
          Length = 1830

 Score =  229 bits (585), Expect = 6e-58
 Identities = 116/263 (44%), Positives = 161/263 (61%), Gaps = 7/263 (2%)
 Frame = +1

Query: 115  QSQWSQK------DDNVDSSNWNKDTQVDETPTPGSWGVKXXXXXXXXXXXXXXKKPDKA 276
            QSQW+Q+      D +  S  W    + ++ P+   WG                   +  
Sbjct: 1569 QSQWNQRGSAVKNDQSESSHGWGPSNEQNQLPSSQGWGSPNAGAGH-----------ESE 1617

Query: 277  DDSQWSKKDSQPDRARGLGSSSGWTKKEGWSSSNAGEGRPKSNRPFKPVGGTSSEFVPAP 456
              SQW +   +  R  G           GW S+N  E + K NRP KP G  + ++    
Sbjct: 1618 TQSQWGQPSGKKSRPEG---------SRGWGSNNT-EWKNKKNRPNKPQGPLNDDYSAGG 1667

Query: 457  M-TATGRRLDLFTADEQELLTEIEPIMQSMRKIMSQPGYNEGDPLATDDQAYIVDHVFKY 633
            + TAT +R+D+FT++EQ++L ++EPIMQS+R+IM Q GYN+GDPL+ DDQ+YI+D VF  
Sbjct: 1668 IFTATRQRVDIFTSEEQDILLDVEPIMQSIRRIMHQAGYNDGDPLSADDQSYILDKVFNN 1727

Query: 634  HPDKVAKMGAGIDYVMINKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENFMKEKFPDRGE 813
            HPDK  KMG GIDYVM+++HSSF ++RC Y+VSTDG KEDFSYRKCLENF+KEK+PD  E
Sbjct: 1728 HPDKAVKMGTGIDYVMVSRHSSFLESRCFYVVSTDGHKEDFSYRKCLENFIKEKYPDNAE 1787

Query: 814  AFMAKYFVKRDQQPRPGWNKDRN 882
             F+ KYF    ++PR G N++R+
Sbjct: 1788 TFIGKYF----RRPRAGGNRERS 1806


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
            sativus]
          Length = 1959

 Score =  223 bits (568), Expect = 5e-56
 Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 22/290 (7%)
 Frame = +1

Query: 97   DTQPDLQSQWSQKDDNVDSSNWNKDTQVDETPTPGSWG--------VKXXXXXXXXXXXX 252
            D+Q      W ++     S +W       +  + GSWG                      
Sbjct: 1661 DSQEKTDKPWDKQKSLEASQSWGS-----QNDSLGSWGQPQRASEECSRESQDDSSTQFS 1715

Query: 253  XXKKPDKADDSQWSKKDSQPDRARGLGS---------SSGWTKK----EGWSSSNAGEGR 393
              K P+ +    W ++ S P+ + G GS         S GW KK    +GW   NAGE +
Sbjct: 1716 QLKPPETS--LGWEQQKS-PEVSHGWGSHKESSEQTSSHGWDKKNQGSKGWGG-NAGEWK 1771

Query: 394  PKSNRPFKPVGGTSSEF-VPAPMTATGRRLDLFTADEQELLTEIEPIMQSMRKIMSQPGY 570
             + NRP K  G ++ +  + A  TA+G+RLD+FT++EQ++L +IEPIMQS+RK+M Q GY
Sbjct: 1772 NRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGY 1831

Query: 571  NEGDPLATDDQAYIVDHVFKYHPDKVAKMGAGIDYVMINKHSSFQDTRCLYIVSTDGRKE 750
            N+GDPL+ +DQ++++  VF +HPDK AKMGAGID+ M+++HSSFQ++RC Y+V+TDG KE
Sbjct: 1832 NDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKE 1891

Query: 751  DFSYRKCLENFMKEKFPDRGEAFMAKYFVKRDQQPRPGWNKDRNTTDATN 900
            DFSYRKCL+NF+K K+PD  E F+AKYF    ++PRP  N+DRN     N
Sbjct: 1892 DFSYRKCLDNFIKGKYPDLAEMFVAKYF----RKPRPNRNRDRNPASEEN 1937


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E subunit
            1-like [Cucumis sativus]
          Length = 2019

 Score =  223 bits (568), Expect = 5e-56
 Identities = 122/290 (42%), Positives = 174/290 (60%), Gaps = 22/290 (7%)
 Frame = +1

Query: 97   DTQPDLQSQWSQKDDNVDSSNWNKDTQVDETPTPGSWG--------VKXXXXXXXXXXXX 252
            D+Q      W ++     S +W       +  + GSWG                      
Sbjct: 1721 DSQEKTDKPWDKQKSLEASQSWGS-----QNDSLGSWGQPQRASEECSRESQDDSSTQFS 1775

Query: 253  XXKKPDKADDSQWSKKDSQPDRARGLGS---------SSGWTKK----EGWSSSNAGEGR 393
              K P+ +    W ++ S P+ + G GS         S GW KK    +GW   NAGE +
Sbjct: 1776 QLKPPETS--LGWEQQKS-PEVSHGWGSNKESSEQTSSHGWDKKNQGSKGWGG-NAGEWK 1831

Query: 394  PKSNRPFKPVGGTSSEF-VPAPMTATGRRLDLFTADEQELLTEIEPIMQSMRKIMSQPGY 570
             + NRP K  G ++ +  + A  TA+G+RLD+FT++EQ++L +IEPIMQS+RK+M Q GY
Sbjct: 1832 NRKNRPPKSPGMSNDDANLRALYTASGQRLDMFTSEEQDILADIEPIMQSIRKVMHQSGY 1891

Query: 571  NEGDPLATDDQAYIVDHVFKYHPDKVAKMGAGIDYVMINKHSSFQDTRCLYIVSTDGRKE 750
            N+GDPL+ +DQ++++  VF +HPDK AKMGAGID+ M+++HSSFQ++RC Y+V+TDG KE
Sbjct: 1892 NDGDPLSAEDQSFVLQSVFNFHPDKAAKMGAGIDHFMVSRHSSFQESRCFYVVTTDGHKE 1951

Query: 751  DFSYRKCLENFMKEKFPDRGEAFMAKYFVKRDQQPRPGWNKDRNTTDATN 900
            DFSYRKCL+NF+K K+PD  E F+AKYF    ++PRP  N+DRN     N
Sbjct: 1952 DFSYRKCLDNFIKGKYPDLAEMFVAKYF----RKPRPNRNRDRNPASEEN 1997


>ref|XP_002303926.1| predicted protein [Populus trichocarpa] gi|222841358|gb|EEE78905.1|
            predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  207 bits (527), Expect = 3e-51
 Identities = 99/193 (51%), Positives = 139/193 (72%)
 Frame = +1

Query: 280  DSQWSKKDSQPDRARGLGSSSGWTKKEGWSSSNAGEGRPKSNRPFKPVGGTSSEFVPAPM 459
            D QW ++  +  + R  GS        GW S+N G+ + K NRP KP    ++  +    
Sbjct: 825  DQQWGQQSREFKKDRFEGS-------RGWGSNN-GDWKNKRNRPSKPHEDLNASGI---F 873

Query: 460  TATGRRLDLFTADEQELLTEIEPIMQSMRKIMSQPGYNEGDPLATDDQAYIVDHVFKYHP 639
            T T +RLD+FT+ EQ++L++IEP+M S+R+IM Q GYN+GDPL+ DDQ+Y++D+VF YHP
Sbjct: 874  TTTRQRLDVFTSQEQDILSDIEPLMLSIRRIMHQTGYNDGDPLSADDQSYVLDNVFHYHP 933

Query: 640  DKVAKMGAGIDYVMINKHSSFQDTRCLYIVSTDGRKEDFSYRKCLENFMKEKFPDRGEAF 819
            DK  KMGAGID+V +++HS+FQ++RC YIVSTDG K+DFSYRKCLENF+K K+PD  + F
Sbjct: 934  DKAVKMGAGIDHVTVSRHSNFQESRCFYIVSTDGCKQDFSYRKCLENFIKGKYPDLADEF 993

Query: 820  MAKYFVKRDQQPR 858
            +AKYF +R  + R
Sbjct: 994  IAKYFARRGNRQR 1006