BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025627
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    90   2e-16
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    85   5e-15
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    67   2e-09
ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 ...    65   7e-09
gb|ADN33669.1| ty3-gypsy retroelement transposase [Cucumis melo ...    65   7e-09

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = +2

Query: 5   GDDMVTLKGDASLGRSGITLKAMIKTLRKEGQGFLVEFNYLGKAPENTGEHTQETGQFPG 184
           G++ VTL+G+ +L R+ ++LKAM +TLRKEG GFLV+ N +           +E  + P 
Sbjct: 531 GNETVTLRGNPALSRTEVSLKAMYRTLRKEGGGFLVDLNQMASHEGLP----RELPEVPS 586

Query: 185 FLSPLVQQYKEVFNLPNGLPPVRQQEHQIILKDGTNPVSV 304
            L PL+  Y++VFN+P GLPP R   H I L+ GTNPVSV
Sbjct: 587 CLQPLLSSYQQVFNMPLGLPPDRGHVHAINLQHGTNPVSV 626


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 44/101 (43%), Positives = 63/101 (62%)
 Frame = +2

Query: 2   LGDDMVTLKGDASLGRSGITLKAMIKTLRKEGQGFLVEFNYLGKAPENTGEHTQETGQFP 181
           LG    TL GD +L RS ++LKAM++TLRKEG G  +E N +      +   ++   + P
Sbjct: 594 LGGVPYTLTGDPTLARSKVSLKAMLRTLRKEGGGLWLECNQVEAGGAGSIRDSKVEQEIP 653

Query: 182 GFLSPLVQQYKEVFNLPNGLPPVRQQEHQIILKDGTNPVSV 304
            FL  L+++++ VF  P GLPP R  EH I+LK+G+NPV V
Sbjct: 654 PFLQELMRRFEGVFETPVGLPPRRGHEHAIVLKEGSNPVGV 694


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/99 (39%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
 Frame = +2

Query: 17   VTLKGDASLGRSGITLKAMIKTLRKEGQGFLVE---FNYLGKAPENTGEHTQETGQFPGF 187
            V +KGD SL ++ + LK MIK+ R   QGFL+E      + + PE+ G   +E       
Sbjct: 1445 VKIKGDPSLTKAMVGLKNMIKSWRDSDQGFLIECRAMETMYEPPEDNG--IEEVLAVDEA 1502

Query: 188  LSPLVQQYKEVFNLPNGLPPVRQQEHQIILKDGTNPVSV 304
            +S +++++++VF  P  LPP R  EH I LK GT+PV+V
Sbjct: 1503 VSDVLKKFEDVFTWPETLPPRRSIEHHIYLKQGTDPVNV 1541


>ref|XP_004161775.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 553

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 3/103 (2%)
 Frame = +2

Query: 5   GDDMVTLKGDASLGRSGITLKAMIKTLRKEGQGFLVEFNYLGKAPENTGEHTQETGQFPG 184
           G+  + LKGD  L ++ ++LK+M+K+  +  QG+L+E   +    E +       G+   
Sbjct: 57  GERTIKLKGDPILTKARVSLKSMMKSWTETYQGYLIERYSMEMEREISSAEWYGIGEVHS 116

Query: 185 F---LSPLVQQYKEVFNLPNGLPPVRQQEHQIILKDGTNPVSV 304
               +S L+ Q+++VF +P  LPP R+ EH I L+ GTNPV+V
Sbjct: 117 VSQAISTLLHQFEDVFQMPEELPPRREIEHHIHLRMGTNPVNV 159


>gb|ADN33669.1| ty3-gypsy retroelement transposase [Cucumis melo subsp. melo]
          Length = 710

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/98 (39%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
 Frame = +2

Query: 17  VTLKGDASLGRSGITLKAMIKTLRKEGQGFLVEFNYLGKAPENTGEHTQETGQFP--GFL 190
           V ++GD SL + G++LK+++K+   E QGFLVE   + K      E  +E  +      +
Sbjct: 90  VIIRGDPSLTKKGVSLKSIVKSWVGEDQGFLVECQAI-KGNVAMEELYKEESELTVDNAI 148

Query: 191 SPLVQQYKEVFNLPNGLPPVRQQEHQIILKDGTNPVSV 304
           SPL++++++VF     LPP R  EH I LK GTNPV V
Sbjct: 149 SPLLRKFEDVFEWLETLPPKRGIEHHIHLKQGTNPVDV 186