BLASTX nr result

ID: Cnidium21_contig00025606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025606
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155073.1| PREDICTED: transportin-3-like [Cucumis sativus]    74   4e-11
ref|XP_004138138.1| PREDICTED: transportin-3-like [Cucumis sativus]    74   4e-11
ref|XP_003525090.1| PREDICTED: transportin-3-like isoform 2 [Gly...    72   9e-11
ref|XP_003525089.1| PREDICTED: transportin-3-like isoform 1 [Gly...    72   9e-11
ref|XP_002511481.1| transportin, putative [Ricinus communis] gi|...    72   2e-10

>ref|XP_004155073.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 493

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 47/95 (49%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
 Frame = -1

Query: 382 TQRASFQSKDLSESRKAECKSLLHFLHIHWC*NLSLV*ILKSYPRHQSM-------VMNL 224
           T  AS  S+ LSE+       L+H+         S        P H  +       VMNL
Sbjct: 225 TALASLNSELLSEASVNVISELIHY---------SAAGSSSGLPVHMPLIQVIVPQVMNL 275

Query: 223 KAQLRDPEKDEEDIKAIARLFADLGDSYVELIATG 119
           KAQLRD  KDEED+KAIARLFAD+GDSYVELIATG
Sbjct: 276 KAQLRDSSKDEEDVKAIARLFADMGDSYVELIATG 310


>ref|XP_004138138.1| PREDICTED: transportin-3-like [Cucumis sativus]
          Length = 968

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 47/95 (49%), Positives = 54/95 (56%), Gaps = 7/95 (7%)
 Frame = -1

Query: 382 TQRASFQSKDLSESRKAECKSLLHFLHIHWC*NLSLV*ILKSYPRHQSM-------VMNL 224
           T  AS  S+ LSE+       L+H+         S        P H  +       VMNL
Sbjct: 225 TALASLNSELLSEASVNVISELIHY---------SAAGSSSGLPVHMPLIQVIVPQVMNL 275

Query: 223 KAQLRDPEKDEEDIKAIARLFADLGDSYVELIATG 119
           KAQLRD  KDEED+KAIARLFAD+GDSYVELIATG
Sbjct: 276 KAQLRDSSKDEEDVKAIARLFADMGDSYVELIATG 310



 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -2

Query: 129 LQPAVNSCLNIESSDWRPAEASLYCIQGISDYVSFAAAEVMPQ 1
           L  AV SC N E S+WRPAEA+L+CI+ ISDYVS    E+MPQ
Sbjct: 436 LVEAVTSCGNSEQSEWRPAEAALFCIRAISDYVSVGETEIMPQ 478


>ref|XP_003525090.1| PREDICTED: transportin-3-like isoform 2 [Glycine max]
          Length = 967

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
 Frame = -1

Query: 382 TQRASFQSKDLSESRKAECKSLLHFL---HIHWC*NLSLV*ILKSYPRHQSMVMNLKAQL 212
           T  +S  S+ LSE+       L+H+     I    N+ L+ ++  +      VMNLKAQL
Sbjct: 225 TALSSLNSELLSEASVNVISELIHYTTAGDIDVSANMPLIQVIVPH------VMNLKAQL 278

Query: 211 RDPEKDEEDIKAIARLFADLGDSYVELIATG 119
            D  KDEED+KAIARLFAD+GDSYVELIATG
Sbjct: 279 SDSTKDEEDVKAIARLFADMGDSYVELIATG 309


>ref|XP_003525089.1| PREDICTED: transportin-3-like isoform 1 [Glycine max]
          Length = 959

 Score = 72.4 bits (176), Expect = 9e-11
 Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
 Frame = -1

Query: 382 TQRASFQSKDLSESRKAECKSLLHFL---HIHWC*NLSLV*ILKSYPRHQSMVMNLKAQL 212
           T  +S  S+ LSE+       L+H+     I    N+ L+ ++  +      VMNLKAQL
Sbjct: 225 TALSSLNSELLSEASVNVISELIHYTTAGDIDVSANMPLIQVIVPH------VMNLKAQL 278

Query: 211 RDPEKDEEDIKAIARLFADLGDSYVELIATG 119
            D  KDEED+KAIARLFAD+GDSYVELIATG
Sbjct: 279 SDSTKDEEDVKAIARLFADMGDSYVELIATG 309


>ref|XP_002511481.1| transportin, putative [Ricinus communis]
           gi|223550596|gb|EEF52083.1| transportin, putative
           [Ricinus communis]
          Length = 967

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = -1

Query: 235 VMNLKAQLRDPEKDEEDIKAIARLFADLGDSYVELIATG 119
           VM+LK QLRDP KDEED+KAIARLFAD+GDSYVELIATG
Sbjct: 272 VMSLKEQLRDPSKDEEDVKAIARLFADMGDSYVELIATG 310


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