BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025598
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...   125   4e-27
ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L...   125   5e-27
ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g...   124   6e-27
ref|XP_002462809.1| hypothetical protein SORBIDRAFT_02g032360 [S...   124   1e-26
ref|XP_003568630.1| PREDICTED: ubiquitin-60S ribosomal protein L...   122   4e-26

>ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score =  125 bits (314), Expect = 4e-27
 Identities = 60/112 (53%), Positives = 86/112 (76%)
 Frame = -3

Query: 339 KMQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVG 160
           +M IFVK+L  KTI+L V+SSD+++ VK  I ++ G   D  + RL+FAG++L+D R + 
Sbjct: 76  RMXIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLDDGRTLA 133

Query: 159 DYQLQNESTLDVLVRLRGGKGGPPSRMDPNLIQLAQKYNQKKMICRKCYARL 4
           DY +Q ESTL +++RLRGG+G  P R++P L++LA KYN++KMICRKCYARL
Sbjct: 134 DYNIQKESTLHLVLRLRGGRGCYPRRIEPTLLKLALKYNERKMICRKCYARL 185



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 36/77 (46%), Positives = 55/77 (71%)
 Frame = -3

Query: 336 MQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVGD 157
           MQIFVK+L  KTI+L V+SSD ++ VK  I ++ G     E+ RL+FAG++L++ R + D
Sbjct: 1   MQIFVKTLTGKTITLEVESSDIIDNVKTKIQDKEGIPP--EQQRLIFAGKQLDNGRTLAD 58

Query: 156 YQLQNESTLDVLVRLRG 106
             +Q ESTL +++RL+G
Sbjct: 59  CNIQKESTLHLVLRLQG 75


>ref|XP_003567643.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 218

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/114 (55%), Positives = 86/114 (75%), Gaps = 1/114 (0%)
 Frame = -3

Query: 342 SKMQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNV 163
           +KMQIFVK+L  KTI+L V+SSD+++ VK  I ++ G   D  + RL+FAG++LED R +
Sbjct: 75  AKMQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPD--QQRLIFAGKQLEDGRTL 132

Query: 162 GDYQLQNESTLDVLVRLRGG-KGGPPSRMDPNLIQLAQKYNQKKMICRKCYARL 4
            DY +Q ESTL +++RLRGG +G  P  ++PNL  LAQKYN+ KM+CRKCYARL
Sbjct: 133 ADYNIQKESTLHLVLRLRGGSRGQYPKNLEPNLRILAQKYNENKMVCRKCYARL 186



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 37/76 (48%), Positives = 55/76 (72%)
 Frame = -3

Query: 336 MQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVGD 157
           MQIFVK+L  KTI+L V+S D+++ VK  I ++ G   D  + RL+FAG++L+D R + D
Sbjct: 1   MQIFVKTLTGKTITLEVESRDTIDSVKAKIQDKEGIPPD--QQRLIFAGKQLDDGRTLAD 58

Query: 156 YQLQNESTLDVLVRLR 109
           Y +Q ESTL +++RLR
Sbjct: 59  YNIQKESTLHLVLRLR 74


>ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group]
           gi|51535937|dbj|BAD38019.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
           gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa
           Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical
           protein OsI_31610 [Oryza sativa Indica Group]
           gi|125605917|gb|EAZ44953.1| hypothetical protein
           OsJ_29596 [Oryza sativa Japonica Group]
          Length = 140

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/112 (54%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = -3

Query: 336 MQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVGD 157
           MQIFVK+L  KTI+L V+SSD+++ VK  I ++ G   D  + RL+FAG++LED R + D
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLAD 58

Query: 156 YQLQNESTLDVLVRLRGG-KGGPPSRMDPNLIQLAQKYNQKKMICRKCYARL 4
           Y +Q ESTL +++RLRGG +GG P  ++PNL +LAQKYN+ K++CR+CYARL
Sbjct: 59  YNIQKESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARL 110


>ref|XP_002462809.1| hypothetical protein SORBIDRAFT_02g032360 [Sorghum bicolor]
           gi|241926186|gb|EER99330.1| hypothetical protein
           SORBIDRAFT_02g032360 [Sorghum bicolor]
          Length = 143

 Score =  124 bits (310), Expect = 1e-26
 Identities = 61/112 (54%), Positives = 86/112 (76%), Gaps = 1/112 (0%)
 Frame = -3

Query: 336 MQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVGD 157
           MQIFVK+L  KTI+L V+SSD+++ VK  I ++ G   D  + RL+FAG++L+D R + D
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPD--QQRLIFAGKQLDDGRTLAD 58

Query: 156 YQLQNESTLDVLVRLRGG-KGGPPSRMDPNLIQLAQKYNQKKMICRKCYARL 4
           Y +Q ESTL +++RLRGG +GG P+ + P+L +LAQKYN+ KM+CRKCYARL
Sbjct: 59  YNIQKESTLHLVLRLRGGSRGGYPTTISPSLRELAQKYNENKMVCRKCYARL 110


>ref|XP_003568630.1| PREDICTED: ubiquitin-60S ribosomal protein L40-like [Brachypodium
           distachyon]
          Length = 139

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/111 (54%), Positives = 82/111 (73%)
 Frame = -3

Query: 336 MQIFVKSLNSKTISLGVDSSDSVEYVKKLIAEESGAGADVEEMRLVFAGQELEDDRNVGD 157
           MQIFVK+L  KTI+L V+SSD+++ +K  I +  G   D  + RL+FAG++LED R + D
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNIKAKIQDREGIPPD--QQRLIFAGKQLEDGRTLAD 58

Query: 156 YQLQNESTLDVLVRLRGGKGGPPSRMDPNLIQLAQKYNQKKMICRKCYARL 4
           Y +Q ESTL +++RLRGG  G     +P+L+QLA KYN+KKM+CRKCYARL
Sbjct: 59  YNIQKESTLHLVLRLRGGSRGHYIIKEPSLLQLALKYNEKKMVCRKCYARL 109