BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025591
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38165.3| unnamed protein product [Vitis vinifera]              197   6e-49
ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containi...   197   6e-49
ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containi...   195   3e-48
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   192   2e-47
ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|2...   192   2e-47

>emb|CBI38165.3| unnamed protein product [Vitis vinifera]
          Length = 654

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/132 (71%), Positives = 113/132 (85%)
 Frame = +2

Query: 2   RDRVSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQY 181
           RD VSWNA+IVG AQNG+G EA+Q+F++M + G K DHVTMIGVLCACSHAGLV+EGR Y
Sbjct: 421 RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY 480

Query: 182 FYSMRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPMPPDSVVWGSLLAACKAYR 361
           F+SM +E+ + P+KDHYTCMVD+LGRAGCL EAKNLI  MP+ PD+VVWGSLLAACK + 
Sbjct: 481 FFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 539

Query: 362 DIELGKSVAEKL 397
           +IE+GK  AEKL
Sbjct: 540 NIEMGKHAAEKL 551


>ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
           [Vitis vinifera]
          Length = 684

 Score =  197 bits (502), Expect = 6e-49
 Identities = 94/132 (71%), Positives = 113/132 (85%)
 Frame = +2

Query: 2   RDRVSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQY 181
           RD VSWNA+IVG AQNG+G EA+Q+F++M + G K DHVTMIGVLCACSHAGLV+EGR Y
Sbjct: 451 RDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHY 510

Query: 182 FYSMRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPMPPDSVVWGSLLAACKAYR 361
           F+SM +E+ + P+KDHYTCMVD+LGRAGCL EAKNLI  MP+ PD+VVWGSLLAACK + 
Sbjct: 511 FFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHG 569

Query: 362 DIELGKSVAEKL 397
           +IE+GK  AEKL
Sbjct: 570 NIEMGKHAAEKL 581


>ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 705

 Score =  195 bits (496), Expect = 3e-48
 Identities = 93/132 (70%), Positives = 111/132 (84%)
 Frame = +2

Query: 2   RDRVSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQY 181
           RD VSWNA+IVG AQNG+G  A+++F++M + G K DHVTMIGVL ACSHAGLV+EGR+Y
Sbjct: 455 RDVVSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRY 514

Query: 182 FYSMRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPMPPDSVVWGSLLAACKAYR 361
           F+SMR E  + PMKDH+TCMVD+LGRAGCL EA +LI  MPM PD+VVWGSLLAACK + 
Sbjct: 515 FHSMRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHG 574

Query: 362 DIELGKSVAEKL 397
           +IELGK VAEKL
Sbjct: 575 NIELGKYVAEKL 586


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  192 bits (488), Expect = 2e-47
 Identities = 92/132 (69%), Positives = 109/132 (82%)
 Frame = +2

Query: 2   RDRVSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQY 181
           RD VSWNA+IVG AQNG+G EA+++F+EM + G + DHVTMIGVL ACSHAGLV+EGR Y
Sbjct: 455 RDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSHAGLVEEGRCY 514

Query: 182 FYSMRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPMPPDSVVWGSLLAACKAYR 361
           F SM  E+ + P+KDHYTCMVD+LGRAGCL EA NLI  MPM PD+VVWGSLLAACK + 
Sbjct: 515 FQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHG 574

Query: 362 DIELGKSVAEKL 397
           +I LGK VAE+L
Sbjct: 575 NITLGKYVAERL 586


>ref|XP_002310520.1| predicted protein [Populus trichocarpa] gi|222853423|gb|EEE90970.1|
           predicted protein [Populus trichocarpa]
          Length = 710

 Score =  192 bits (488), Expect = 2e-47
 Identities = 88/132 (66%), Positives = 110/132 (83%)
 Frame = +2

Query: 2   RDRVSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQY 181
           +D VSWN +I+G AQNG+G EA+++F++M   G K DHVTMIG LCACSHAGLV+EGR+Y
Sbjct: 460 KDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSHAGLVEEGRRY 519

Query: 182 FYSMRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPMPPDSVVWGSLLAACKAYR 361
           F+SM KE+ + P+KDHYTCMVD+LGRAGCL EAK+LI  MP  PD+VVW SLL+ACK +R
Sbjct: 520 FFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWSSLLSACKVHR 579

Query: 362 DIELGKSVAEKL 397
           +I LGK VAEK+
Sbjct: 580 NITLGKYVAEKI 591



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/99 (35%), Positives = 47/99 (47%)
 Frame = +2

Query: 11  VSWNALIVGCAQNGHGPEAIQMFKEMTLLGGKADHVTMIGVLCACSHAGLVDEGRQYFYS 190
           VSWN LI    QNG   EA++ F  MT LG K D VT+  V+ AC+      EG Q    
Sbjct: 223 VSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACATLAAFKEGVQIHAR 282

Query: 191 MRKEYNVEPMKDHYTCMVDMLGRAGCLVEAKNLIGLMPM 307
           + K             +VDM  + G + EA+ +   MP+
Sbjct: 283 VVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPV 321