BLASTX nr result

ID: Cnidium21_contig00025570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025570
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320206.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|NP_192004.1| uncharacterized protein [Arabidopsis thaliana] ...    62   6e-08
ref|XP_003548339.1| PREDICTED: uncharacterized protein At4g00950...    60   1e-07
ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950...    59   5e-07

>ref|XP_002320206.1| predicted protein [Populus trichocarpa] gi|222860979|gb|EEE98521.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/116 (32%), Positives = 61/116 (52%)
 Frame = -2

Query: 384 LNEKKGKKGLFGNSRGQMQKSRKLMGSRQEFTEEGSFVISPSWDDVSQIAEEDDGKECDN 205
           + EK G  G +   R  ++ +R+  G        GS+V   S D   + A++   +E + 
Sbjct: 160 VKEKGGFLGSWSWGRRDLKGNREAGG--------GSYVFPSSGD--REAADQSSNEEEEM 209

Query: 204 NGDPTKVKMTNIRRDGNFTNLSHAKSHFWTAMCEGFKHAIPWKSRKSKKHVHIV*C 37
                KVKMT +RR G+F+ +S+A+S FW ++ EG KH + W+ +K KK    V C
Sbjct: 210 VSSSDKVKMTRMRRSGSFSAVSNARSQFWASIYEGLKHVVGWRRKKLKKDHGFVKC 265


>ref|XP_002321992.1| predicted protein [Populus trichocarpa] gi|222868988|gb|EEF06119.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/60 (46%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
 Frame = -2

Query: 243 QIAEEDDGKECDNNG--DPTKVKMTNIRRDGNFTNLSHAKSHFWTAMCEGFKHAIPWKSR 70
           ++A    G    N+G  +  +VK+T IRR  +F  LSH +SHFWT +CE FKHA+PW  R
Sbjct: 144 EVAAPSHGDIGVNHGGREAVRVKITRIRRRSSFLGLSHTRSHFWTDICESFKHAVPWTRR 203


>ref|NP_192004.1| uncharacterized protein [Arabidopsis thaliana]
           gi|55583995|sp|Q9M160.1|Y4095_ARATH RecName:
           Full=Uncharacterized protein At4g00950
           gi|7267592|emb|CAB80904.1| putative protein [Arabidopsis
           thaliana] gi|17528978|gb|AAL38699.1| unknown protein
           [Arabidopsis thaliana] gi|23296724|gb|AAN13155.1|
           unknown protein [Arabidopsis thaliana]
           gi|332656559|gb|AEE81959.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 291

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 40/131 (30%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
 Frame = -2

Query: 396 GALFLNEKKGKKGLFGNSRGQMQKSRKLMGSRQEFTEEGSFVISPSWDDVSQIAEED--- 226
           G+L + +K+G+ G FG  R +  K +   G        GS+V   S D  S+ + ++   
Sbjct: 166 GSLAVVKKRGRLGFFGFRRRRALKGKTEFG-------RGSYVFPSSVDRESEYSRKEEEE 218

Query: 225 ------------DGKECDNNGDPTKVKMTNIRRDGNFTNL-----SHAKSHFWTAMCEGF 97
                       DG  C  +     VK+++I R G+F+ L     S +KSHFWT +  G 
Sbjct: 219 EKEDKRFGYDDTDGISCSQSSRFCDVKISSISRTGSFSTLPAPPSSSSKSHFWTNVYAGL 278

Query: 96  KHAIPWKSRKS 64
           K  +PWKS+K+
Sbjct: 279 KQVVPWKSKKT 289


>ref|XP_003548339.1| PREDICTED: uncharacterized protein At4g00950-like [Glycine max]
          Length = 241

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/116 (34%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
 Frame = -2

Query: 360 GLFGNSRGQMQKS--RKLMGSRQEFTEEGSFVISPSWDDVSQIAEEDDG----------- 220
           G FG+ RG++      + +G ++E  E+G F    SW + +   E   G           
Sbjct: 125 GSFGSERGKLGTMVLNQGVGIKEEEKEKGWF---GSWREKALKREASGGGGSYVFPSSVE 181

Query: 219 KECDNNGDPTKVK-MTNIRRDGNFTNLSHAKSHFWTAMCEGFKHAIPWKSRKSKKH 55
           K+ +  G   KV+ M    R G+FTN  HAKS  WT MCEG K  +PW+ +K KK+
Sbjct: 182 KDPECVGTHKKVRSMRKRNRPGSFTNPFHAKSSVWTTMCEGLKRVVPWRGKKLKKY 237


>ref|XP_002264990.1| PREDICTED: uncharacterized protein At4g00950 [Vitis vinifera]
           gi|147794098|emb|CAN71155.1| hypothetical protein
           VITISV_030317 [Vitis vinifera]
           gi|297745486|emb|CBI40566.3| unnamed protein product
           [Vitis vinifera]
          Length = 228

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 1/116 (0%)
 Frame = -2

Query: 402 QIGALFLNEKKGKKGLFGNSRGQMQKSRKLMGSRQEFTEEGSFVISPSWDDVSQIAEEDD 223
           Q+GA+ L    G++G FG   G+     K   SR    EEGS   SP+            
Sbjct: 128 QLGAMVL----GRRGFFGGW-GRKNHKGKREASRSLDLEEGS---SPATTG--------- 170

Query: 222 GKECDNNGDPTKVKMTNIRRDGNFTNLSHAKSHFWTAMCEGFKHAIPWK-SRKSKK 58
             + D+ G  ++ KMT + R G + +LS A+SHFW ++ EG K  +PWK S+K KK
Sbjct: 171 --DYDSGGGSSE-KMTRMSRSGRYLSLSQARSHFWASVYEGLKQVVPWKRSKKLKK 223


Top