BLASTX nr result

ID: Cnidium21_contig00025563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025563
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase ...   189   3e-46
ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...   174   1e-41
ref|XP_003603620.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   167   1e-39
ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   167   1e-39
gb|AFK36548.1| unknown [Lotus japonicus]                              166   2e-39

>ref|XP_002281191.2| PREDICTED: probable peptidyl-tRNA hydrolase 2-like [Vitis vinifera]
           gi|296081837|emb|CBI20842.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  189 bits (479), Expect = 3e-46
 Identities = 100/158 (63%), Positives = 117/158 (74%)
 Frame = +1

Query: 70  NSSQLSKRGERRGKEWLSVNFKPENXXXXXXXXXXXXXXXXXAKPLKDYAIGSCSSLSKH 249
           NSSQ +K+ + R  EW +VNFKPEN                 +K  K+    + S L K 
Sbjct: 7   NSSQPNKQKQER--EWFAVNFKPENFIPGLIIGFIFGFFLDLSKVPKNQPRHNNSLLGKR 64

Query: 250 RKQPTLALRNPNEELKMVLVVRQDLKMGTGKIASQCAHAATGLYSELIQSQRALVRQWEH 429
           ++Q  L   N +EELKMVLVVRQDLKMGTGKIASQCAHAATG+Y+EL+QSQR+L+RQWE 
Sbjct: 65  QQQQQLVSSNSDEELKMVLVVRQDLKMGTGKIASQCAHAATGMYAELVQSQRSLLRQWEQ 124

Query: 430 CGQAKIVVTCKNQQEMNKLKEMAENIGLPTYVVADAGR 543
           CGQAKIVVTCKNQQEMNKLKE AE+IGLPT+VVADAGR
Sbjct: 125 CGQAKIVVTCKNQQEMNKLKEAAESIGLPTFVVADAGR 162


>ref|XP_004136220.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus] gi|449517243|ref|XP_004165655.1| PREDICTED:
           peptidyl-tRNA hydrolase 2, mitochondrial-like [Cucumis
           sativus]
          Length = 192

 Score =  174 bits (440), Expect = 1e-41
 Identities = 95/162 (58%), Positives = 114/162 (70%)
 Frame = +1

Query: 58  LMPANSSQLSKRGERRGKEWLSVNFKPENXXXXXXXXXXXXXXXXXAKPLKDYAIGSCSS 237
           ++ A+ S   K+  +  KEWLSV+FKPEN                 +KP K  A      
Sbjct: 1   MLGASKSSRKKQQVKPEKEWLSVSFKPENFIPGLVIGFILGLFLDLSKPSKGNAKKGYFL 60

Query: 238 LSKHRKQPTLALRNPNEELKMVLVVRQDLKMGTGKIASQCAHAATGLYSELIQSQRALVR 417
            SK++ Q + A  N ++ELK+VLVVRQDLKMG+GKIASQCAHAATGLY+EL+QS R L+R
Sbjct: 61  PSKYQ-QLSPASNNGDQELKLVLVVRQDLKMGSGKIASQCAHAATGLYAELMQSHRNLLR 119

Query: 418 QWEHCGQAKIVVTCKNQQEMNKLKEMAENIGLPTYVVADAGR 543
           QWE CGQ KIVVTCKNQ EMNKLK+ AENIGLPT+VVADAGR
Sbjct: 120 QWELCGQPKIVVTCKNQHEMNKLKDSAENIGLPTFVVADAGR 161


>ref|XP_003603620.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355492668|gb|AES73871.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula] gi|388498994|gb|AFK37563.1|
           unknown [Medicago truncatula]
          Length = 174

 Score =  167 bits (423), Expect = 1e-39
 Identities = 84/152 (55%), Positives = 110/152 (72%)
 Frame = +1

Query: 88  KRGERRGKEWLSVNFKPENXXXXXXXXXXXXXXXXXAKPLKDYAIGSCSSLSKHRKQPTL 267
           K+ +++  EWLS +FKPEN                 +KP +++      S +K + Q ++
Sbjct: 11  KQQQKQKGEWLSGSFKPENFIPGLVIGFICGLLIDLSKPTRNHLSNKIFSSTKLQNQLSV 70

Query: 268 ALRNPNEELKMVLVVRQDLKMGTGKIASQCAHAATGLYSELIQSQRALVRQWEHCGQAKI 447
           +    ++ELKMVLVVRQDLKM +GKIASQCAHAATG+Y+EL++S R+L+RQWE CGQ KI
Sbjct: 71  SSNGADQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMRSNRSLLRQWEQCGQPKI 130

Query: 448 VVTCKNQQEMNKLKEMAENIGLPTYVVADAGR 543
           VVTCKNQQEMNKL E AE+IGLPT+VV+DAGR
Sbjct: 131 VVTCKNQQEMNKLTEAAESIGLPTFVVSDAGR 162


>ref|XP_003603619.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355492667|gb|AES73870.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula] gi|388514387|gb|AFK45255.1|
           unknown [Medicago truncatula]
          Length = 193

 Score =  167 bits (423), Expect = 1e-39
 Identities = 84/152 (55%), Positives = 110/152 (72%)
 Frame = +1

Query: 88  KRGERRGKEWLSVNFKPENXXXXXXXXXXXXXXXXXAKPLKDYAIGSCSSLSKHRKQPTL 267
           K+ +++  EWLS +FKPEN                 +KP +++      S +K + Q ++
Sbjct: 11  KQQQKQKGEWLSGSFKPENFIPGLVIGFICGLLIDLSKPTRNHLSNKIFSSTKLQNQLSV 70

Query: 268 ALRNPNEELKMVLVVRQDLKMGTGKIASQCAHAATGLYSELIQSQRALVRQWEHCGQAKI 447
           +    ++ELKMVLVVRQDLKM +GKIASQCAHAATG+Y+EL++S R+L+RQWE CGQ KI
Sbjct: 71  SSNGADQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMRSNRSLLRQWEQCGQPKI 130

Query: 448 VVTCKNQQEMNKLKEMAENIGLPTYVVADAGR 543
           VVTCKNQQEMNKL E AE+IGLPT+VV+DAGR
Sbjct: 131 VVTCKNQQEMNKLTEAAESIGLPTFVVSDAGR 162


>gb|AFK36548.1| unknown [Lotus japonicus]
          Length = 195

 Score =  166 bits (421), Expect = 2e-39
 Identities = 90/159 (56%), Positives = 113/159 (71%), Gaps = 1/159 (0%)
 Frame = +1

Query: 70  NSSQLSKRGERRGK-EWLSVNFKPENXXXXXXXXXXXXXXXXXAKPLKDYAIGSCSSLSK 246
           NS Q  ++ +R+ K EWL+ +FKPEN                 +KP ++       S SK
Sbjct: 7   NSKQPQEQQQRKQKGEWLAGSFKPENFIPGLIIGFIFGMFLDLSKPHRNLLSKKIFSPSK 66

Query: 247 HRKQPTLALRNPNEELKMVLVVRQDLKMGTGKIASQCAHAATGLYSELIQSQRALVRQWE 426
            ++  TL+  N + E KMVLVVRQDLKM +GK+ASQCAHAATG+Y+EL+QS R+L+RQWE
Sbjct: 67  VQQHLTLS-GNGDREFKMVLVVRQDLKMKSGKVASQCAHAATGMYAELMQSDRSLLRQWE 125

Query: 427 HCGQAKIVVTCKNQQEMNKLKEMAENIGLPTYVVADAGR 543
            CGQ KIVVTC+NQQEMNKLKE AE+IGLPT+VVADAGR
Sbjct: 126 QCGQPKIVVTCRNQQEMNKLKETAESIGLPTFVVADAGR 164


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