BLASTX nr result

ID: Cnidium21_contig00025551 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025551
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625734.1| Polyadenylate binding protein [Medicago trun...   144   7e-33
ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding pr...   144   1e-32
ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding pr...   139   2e-31
ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding pr...   135   3e-30
emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]   135   3e-30

>ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
           gi|355500749|gb|AES81952.1| Polyadenylate binding
           protein [Medicago truncatula]
          Length = 613

 Score =  144 bits (363), Expect = 7e-33
 Identities = 71/112 (63%), Positives = 85/112 (75%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           ITSA +MRD+KGISKGFGFVCFSTPEEANKAV SFHGFMFHGKP+YV++AQRKE+R AQL
Sbjct: 318 ITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQRKEDRQAQL 377

Query: 157 QLQYAQHVAGLAAAGQSAVFXXXXXXXXXXXXGIIPQVSPRPGFMYQPLAMR 2
           QLQYAQ +AGLA    +A+             G++    PR G +YQP+A+R
Sbjct: 378 QLQYAQQIAGLAGP-STAIVPGGYPPFYYTATGVVSHAPPRAGLVYQPMALR 428



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/66 (42%), Positives = 40/66 (60%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           I S  + +D  G+SKGFGFV F  PE+A +A+ + +G     K +YVA AQ+K ER   L
Sbjct: 215 IISLAVAKDSNGMSKGFGFVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKKAEREQIL 274

Query: 157 QLQYAQ 140
             Q+ +
Sbjct: 275 HQQFEE 280


>ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 632

 Score =  144 bits (362), Expect = 1e-32
 Identities = 74/112 (66%), Positives = 84/112 (75%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           ITSA +MRD+KGISKGFGFVCFSTPEEANKAV +FHGFMFHGKP+YVA+AQRKE+R AQL
Sbjct: 320 ITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFHGKPLYVALAQRKEDRKAQL 379

Query: 157 QLQYAQHVAGLAAAGQSAVFXXXXXXXXXXXXGIIPQVSPRPGFMYQPLAMR 2
           QLQYAQ VAGL+    +A+             G+I  V PR G MYQ L MR
Sbjct: 380 QLQYAQQVAGLSGP-STAIIPGGYPPYYYAATGVISHVPPRAGLMYQHLPMR 430


>ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
           [Glycine max]
          Length = 636

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/112 (63%), Positives = 84/112 (75%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           ITSA +MRD+KGISKGFGFVCFSTPEEANKAV +FHGFM+HGKP+YVA+AQRKE+R AQL
Sbjct: 320 ITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYVALAQRKEDRKAQL 379

Query: 157 QLQYAQHVAGLAAAGQSAVFXXXXXXXXXXXXGIIPQVSPRPGFMYQPLAMR 2
           QLQYAQ +A L+    +A+             G+I  V PR G MYQ LA+R
Sbjct: 380 QLQYAQQLARLSGP-STAIIPSGYPPYYYAASGVISHVPPRAGLMYQHLALR 430



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 27/66 (40%), Positives = 40/66 (60%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           I S  + +D  G+SKGFGFV +  P++A KA+ + +G     K +YVA AQ+K ER   L
Sbjct: 217 IVSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAMNGSQLGSKILYVARAQKKAEREQIL 276

Query: 157 QLQYAQ 140
             Q+ +
Sbjct: 277 HHQFEE 282


>ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
           vinifera] gi|297740018|emb|CBI30200.3| unnamed protein
           product [Vitis vinifera]
          Length = 634

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           ITSA LMRD+KGISKGFGFVCFSTP+EA+KAV +FHG+MFH KP+YVAIAQRKE+R AQL
Sbjct: 320 ITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQL 379

Query: 157 QLQYAQHVAGLAAAGQSAVFXXXXXXXXXXXXGIIPQVSPRPGFMYQPLAMR 2
           QL YAQ +AGLA      +             G+IP   PR G MYQPL +R
Sbjct: 380 QLHYAQRMAGLAGPSTPVIPGGYPPLYYTAPPGVIP---PRQGLMYQPLGLR 428



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           I S  + +DE G+S+GFGFV F +PE+A +A+ + +G     K +YVA AQ+K ER   L
Sbjct: 217 IASLVISKDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLL 276

Query: 157 QLQYAQ 140
           + Q+ +
Sbjct: 277 RRQFEE 282


>emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
          Length = 544

 Score =  135 bits (341), Expect = 3e-30
 Identities = 70/112 (62%), Positives = 81/112 (72%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           ITSA LMRD+KGISKGFGFVCFSTP+EA+KAV +FHG+MFH KP+YVAIAQRKE+R AQL
Sbjct: 340 ITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQRKEDRQAQL 399

Query: 157 QLQYAQHVAGLAAAGQSAVFXXXXXXXXXXXXGIIPQVSPRPGFMYQPLAMR 2
           QL YAQ +AGLA      +             G+IP   PR G MYQPL +R
Sbjct: 400 QLHYAQRMAGLAGPSTPVIPGGYPPLYYTAPPGVIP---PRQGLMYQPLGLR 448



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/66 (42%), Positives = 43/66 (65%)
 Frame = -2

Query: 337 ITSATLMRDEKGISKGFGFVCFSTPEEANKAVTSFHGFMFHGKPIYVAIAQRKEERLAQL 158
           I S  + +DE G+S+GFGFV F +PE+A +A+ + +G     K +YVA AQ+K ER   L
Sbjct: 237 IASLVISKDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLL 296

Query: 157 QLQYAQ 140
           + Q+ +
Sbjct: 297 RRQFEE 302


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