BLASTX nr result

ID: Cnidium21_contig00025544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025544
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19139.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-contain...   159   3e-37
ref|XP_002301041.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communi...   144   7e-33

>emb|CBI19139.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/136 (60%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
 Frame = +2

Query: 20  MGEYVNNELDNMVTSYYXXXXXXXXXXXXXXXXXXLVYHDDDDD-SFTFEQSKPKTDTSA 196
           M E+ N +L+ +V  YY                    +   D D    FE +KPKTDTSA
Sbjct: 1   MAEFQNPDLEYVVDDYYDMTDFEEDSFSETDPQRNSPFEAFDSDVEDNFEMNKPKTDTSA 60

Query: 197 MEARNGKDIQGIPWERLNFSRDNYRETRLSQYINYESLSLPRGELEKDFNKVEKGHNFYD 376
           +EARNGKDIQGIPWERLNF+RD YRETRL QY NYE+LS PR ELEKD  K+EKG  FYD
Sbjct: 61  LEARNGKDIQGIPWERLNFTRDKYRETRLEQYKNYENLSRPREELEKDCKKIEKGSTFYD 120

Query: 377 FQFNTRLVKSTIVHFQ 424
           FQFNTRLVKSTIVHFQ
Sbjct: 121 FQFNTRLVKSTIVHFQ 136


>ref|XP_002285804.1| PREDICTED: uncharacterized WD repeat-containing protein C2A9.03
           [Vitis vinifera]
          Length = 450

 Score =  159 bits (401), Expect = 3e-37
 Identities = 82/136 (60%), Positives = 92/136 (67%), Gaps = 1/136 (0%)
 Frame = +2

Query: 20  MGEYVNNELDNMVTSYYXXXXXXXXXXXXXXXXXXLVYHDDDDD-SFTFEQSKPKTDTSA 196
           M E+ N +L+ +V  YY                    +   D D    FE +KPKTDTSA
Sbjct: 1   MAEFQNPDLEYVVDDYYDMTDFEEDSFSETDPQRNSPFEAFDSDVEDNFEMNKPKTDTSA 60

Query: 197 MEARNGKDIQGIPWERLNFSRDNYRETRLSQYINYESLSLPRGELEKDFNKVEKGHNFYD 376
           +EARNGKDIQGIPWERLNF+RD YRETRL QY NYE+LS PR ELEKD  K+EKG  FYD
Sbjct: 61  LEARNGKDIQGIPWERLNFTRDKYRETRLEQYKNYENLSRPREELEKDCKKIEKGSTFYD 120

Query: 377 FQFNTRLVKSTIVHFQ 424
           FQFNTRLVKSTIVHFQ
Sbjct: 121 FQFNTRLVKSTIVHFQ 136


>ref|XP_002301041.1| predicted protein [Populus trichocarpa] gi|222842767|gb|EEE80314.1|
           predicted protein [Populus trichocarpa]
          Length = 448

 Score =  147 bits (372), Expect = 7e-34
 Identities = 77/135 (57%), Positives = 93/135 (68%)
 Frame = +2

Query: 20  MGEYVNNELDNMVTSYYXXXXXXXXXXXXXXXXXXLVYHDDDDDSFTFEQSKPKTDTSAM 199
           M  + NN+L+ +V   +                   V  + +DD F   + KP+TDTSA+
Sbjct: 1   MDHFQNNDLEYVVDDPFGDDLFREDEPQRNDDLDDAVDSEFEDD-FESVRFKPQTDTSAL 59

Query: 200 EARNGKDIQGIPWERLNFSRDNYRETRLSQYINYESLSLPRGELEKDFNKVEKGHNFYDF 379
           EARNGKDIQGIPWERLNF+RD YRETRL QY NYE+LSLPR EL+K+  +VEKG  FYDF
Sbjct: 60  EARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSLPRFELDKECLEVEKGQTFYDF 119

Query: 380 QFNTRLVKSTIVHFQ 424
           Q+NTRLVKSTIVHFQ
Sbjct: 120 QYNTRLVKSTIVHFQ 134


>ref|XP_002307391.1| predicted protein [Populus trichocarpa] gi|222856840|gb|EEE94387.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/96 (76%), Positives = 80/96 (83%)
 Frame = +2

Query: 137 DDDDDSFTFEQSKPKTDTSAMEARNGKDIQGIPWERLNFSRDNYRETRLSQYINYESLSL 316
           D +DD   F  SKPKTDTSA+EARNGKDIQGIPWERLNF+RD YRETRL QY NYE+LS 
Sbjct: 4   DFEDD---FVSSKPKTDTSALEARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSR 60

Query: 317 PRGELEKDFNKVEKGHNFYDFQFNTRLVKSTIVHFQ 424
           PR EL K+  +VEKG  FYDF+FNTRLVKSTIVHFQ
Sbjct: 61  PRFELHKECLEVEKGKTFYDFEFNTRLVKSTIVHFQ 96


>ref|XP_002513893.1| WD-repeat protein, putative [Ricinus communis]
           gi|223546979|gb|EEF48476.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 447

 Score =  144 bits (363), Expect = 7e-33
 Identities = 75/135 (55%), Positives = 90/135 (66%)
 Frame = +2

Query: 20  MGEYVNNELDNMVTSYYXXXXXXXXXXXXXXXXXXLVYHDDDDDSFTFEQSKPKTDTSAM 199
           M ++ N++L+ +V  YY                       D +D F  +  K K+DTSA+
Sbjct: 1   MAQFHNDDLEYVVDDYYDVVDFEFDGPQVAPTHDFDSIDSDFEDDF--DSGKAKSDTSAL 58

Query: 200 EARNGKDIQGIPWERLNFSRDNYRETRLSQYINYESLSLPRGELEKDFNKVEKGHNFYDF 379
           EARNGKDIQGIPWERLNF+RD YRETRL QY NYE+LS  R +L K+  +VEKG NFYDF
Sbjct: 59  EARNGKDIQGIPWERLNFTRDKYRETRLKQYKNYENLSRSRQDLHKECLQVEKGKNFYDF 118

Query: 380 QFNTRLVKSTIVHFQ 424
           QFNTRLVKSTIVHFQ
Sbjct: 119 QFNTRLVKSTIVHFQ 133


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