BLASTX nr result

ID: Cnidium21_contig00025542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025542
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vi...   133   1e-29
ref|XP_002525636.1| DNA damage-binding protein, putative [Ricinu...   130   1e-28
ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMA...   128   6e-28
ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-lik...   128   6e-28
ref|XP_003615633.1| DAMAGED DNA-BINDING protein [Medicago trunca...   126   2e-27

>ref|XP_002279214.1| PREDICTED: protein DAMAGED DNA-BINDING 2 [Vitis vinifera]
           gi|147833025|emb|CAN61895.1| hypothetical protein
           VITISV_028792 [Vitis vinifera]
           gi|297745903|emb|CBI15959.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  133 bits (335), Expect = 1e-29
 Identities = 60/76 (78%), Positives = 69/76 (90%)
 Frame = +3

Query: 3   HMKFNPRNDGTVYGASSDGTISCTDLETGLSSSLINLNPDGWQGASTWRMLYGLDVNPEK 182
           +M+F P ND T+Y ASSDGTISCTDLETG+SSSL+NLNP+GW+G STWRMLYG+D+N EK
Sbjct: 220 NMRFKPTNDETIYAASSDGTISCTDLETGISSSLMNLNPNGWEGPSTWRMLYGMDINSEK 279

Query: 183 GLVLVADNFGSLYLVD 230
           GLVLVADNFG LYLVD
Sbjct: 280 GLVLVADNFGFLYLVD 295


>ref|XP_002525636.1| DNA damage-binding protein, putative [Ricinus communis]
           gi|223535072|gb|EEF36754.1| DNA damage-binding protein,
           putative [Ricinus communis]
          Length = 558

 Score =  130 bits (326), Expect = 1e-28
 Identities = 56/76 (73%), Positives = 68/76 (89%)
 Frame = +3

Query: 3   HMKFNPRNDGTVYGASSDGTISCTDLETGLSSSLINLNPDGWQGASTWRMLYGLDVNPEK 182
           +M+FNP NDG +Y ASSDGTISCTD+ETG+SSSL+NLNPDGWQG   WRMLYG+D+N EK
Sbjct: 216 NMRFNPSNDGMMYAASSDGTISCTDMETGISSSLMNLNPDGWQGPRNWRMLYGMDINTEK 275

Query: 183 GLVLVADNFGSLYLVD 230
           G+V+VADNFG LY++D
Sbjct: 276 GVVVVADNFGFLYMLD 291


>ref|XP_004160170.1| PREDICTED: LOW QUALITY PROTEIN: protein DAMAGED DNA-BINDING 2-like
           [Cucumis sativus]
          Length = 562

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/76 (73%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   HMKFNPRNDGTVYGASSDGTISCTDLETGLSSSLINLNPDGWQGASTWRMLYGLDVNPEK 182
           +M+F+P NDG +Y ASSDGTISCTD+ETG SS L+NLNPDGWQG ++WRMLYG+D+NPEK
Sbjct: 220 NMRFSPTNDGMIYAASSDGTISCTDMETGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEK 279

Query: 183 GLVLVADNFGSLYLVD 230
             V VADNFG LYLVD
Sbjct: 280 HTVFVADNFGFLYLVD 295


>ref|XP_004143155.1| PREDICTED: protein DAMAGED DNA-BINDING 2-like [Cucumis sativus]
          Length = 562

 Score =  128 bits (321), Expect = 6e-28
 Identities = 56/76 (73%), Positives = 66/76 (86%)
 Frame = +3

Query: 3   HMKFNPRNDGTVYGASSDGTISCTDLETGLSSSLINLNPDGWQGASTWRMLYGLDVNPEK 182
           +M+F+P NDG +Y ASSDGTISCTD+ETG SS L+NLNPDGWQG ++WRMLYG+D+NPEK
Sbjct: 220 NMRFSPTNDGMIYAASSDGTISCTDMETGFSSPLMNLNPDGWQGPNSWRMLYGMDINPEK 279

Query: 183 GLVLVADNFGSLYLVD 230
             V VADNFG LYLVD
Sbjct: 280 HTVFVADNFGFLYLVD 295


>ref|XP_003615633.1| DAMAGED DNA-BINDING protein [Medicago truncatula]
           gi|355516968|gb|AES98591.1| DAMAGED DNA-BINDING protein
           [Medicago truncatula]
          Length = 571

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/76 (77%), Positives = 67/76 (88%)
 Frame = +3

Query: 3   HMKFNPRNDGTVYGASSDGTISCTDLETGLSSSLINLNPDGWQGASTWRMLYGLDVNPEK 182
           +MKFNP ND  VY ASSDGTIS TDLETG+SSSL+NLNPDGW G +TW+MLYG+D+N EK
Sbjct: 233 NMKFNPTNDCMVYSASSDGTISYTDLETGMSSSLMNLNPDGWHGPNTWKMLYGMDINCEK 292

Query: 183 GLVLVADNFGSLYLVD 230
           GLVLVADNFG L+LVD
Sbjct: 293 GLVLVADNFGFLHLVD 308


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