BLASTX nr result

ID: Cnidium21_contig00025511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025511
         (390 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002887814.1| transducin family protein [Arabidopsis lyrat...   169   3e-40
ref|NP_178186.1| drought-sensitive 1 protein [Arabidopsis thalia...   167   1e-39
ref|XP_002523525.1| protein with unknown function [Ricinus commu...   166   2e-39
ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-l...   165   4e-39

>ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score =  172 bits (437), Expect = 2e-41
 Identities = 82/129 (63%), Positives = 101/129 (78%)
 Frame = +3

Query: 3   SSYDGCIRLMDVERETFDLAYHGAHSICSLSQRPNDVKSLYFGEGQGKVNVWDETAGKSS 182
           S YDG +RLMD E+E FDL +    +I SLSQ PNDVKSLYFGEG+G ++VWD+  G  S
Sbjct: 278 SCYDGYLRLMDAEKEVFDLVHSCDDAIFSLSQHPNDVKSLYFGEGRGGLSVWDDRTGSVS 337

Query: 183 ALWSLHEGRINSIDFNAHNTNIMATSSSDRTACIWDLRKIAAHKPEAIIAVNHKRAVNSA 362
           + W+LHE RIN+IDFN  N NIMATSSSD T C+WDLRK+ A KP+++  VNH+RAV+SA
Sbjct: 338 SQWTLHEDRINTIDFNPQNPNIMATSSSDATVCLWDLRKVDAGKPKSLKIVNHERAVHSA 397

Query: 363 FFSPSGSLL 389
           +FSPSGS L
Sbjct: 398 YFSPSGSSL 406


>ref|XP_002887814.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333655|gb|EFH64073.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 520

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/129 (63%), Positives = 96/129 (74%)
 Frame = +3

Query: 3   SSYDGCIRLMDVERETFDLAYHGAHSICSLSQRPNDVKSLYFGEGQGKVNVWDETAGKSS 182
           SSYDG IRLMDVE+  FDL Y    +I SLSQRPND +SLYFGE  G  N+WD  AGKS 
Sbjct: 285 SSYDGLIRLMDVEKSVFDLLYSTDEAIFSLSQRPNDEQSLYFGEDYGMFNIWDLRAGKSV 344

Query: 183 ALWSLHEGRINSIDFNAHNTNIMATSSSDRTACIWDLRKIAAHKPEAIIAVNHKRAVNSA 362
             W LHE RINSIDFN  N ++MATSS+D TAC+WDLR + A KP+ +  +NH RAV+SA
Sbjct: 345 FHWELHEQRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKILTTLNHSRAVHSA 404

Query: 363 FFSPSGSLL 389
           +FSPSG LL
Sbjct: 405 YFSPSGLLL 413


>ref|NP_178186.1| drought-sensitive 1 protein [Arabidopsis thaliana]
           gi|6503282|gb|AAF14658.1|AC011713_6 Contains similarity
           to gb|AF092102 G-protein beta subunit git5p from
           Schizosaccharomyces pombe and contains 2 PF|00400WD
           domain, G-beta repeat domains [Arabidopsis thaliana]
           gi|332198318|gb|AEE36439.1| drought-sensitive 1 protein
           [Arabidopsis thaliana]
          Length = 516

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/126 (64%), Positives = 94/126 (74%)
 Frame = +3

Query: 3   SSYDGCIRLMDVERETFDLAYHGAHSICSLSQRPNDVKSLYFGEGQGKVNVWDETAGKSS 182
           SSYDG IRLMDVE+  FDL Y    +I SLSQRPND +SLYFG+  G  NVWD  AGKS 
Sbjct: 282 SSYDGLIRLMDVEKSVFDLVYSTDEAIFSLSQRPNDEQSLYFGQDYGVFNVWDLRAGKSV 341

Query: 183 ALWSLHEGRINSIDFNAHNTNIMATSSSDRTACIWDLRKIAAHKPEAIIAVNHKRAVNSA 362
             W LHE RINSIDFN  N ++MATSS+D TAC+WDLR + A KP+ +  VNH RAV+SA
Sbjct: 342 FHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLSTVNHSRAVHSA 401

Query: 363 FFSPSG 380
           +FSPSG
Sbjct: 402 YFSPSG 407


>ref|XP_002523525.1| protein with unknown function [Ricinus communis]
           gi|223537232|gb|EEF38864.1| protein with unknown
           function [Ricinus communis]
          Length = 530

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/129 (59%), Positives = 98/129 (75%)
 Frame = +3

Query: 3   SSYDGCIRLMDVERETFDLAYHGAHSICSLSQRPNDVKSLYFGEGQGKVNVWDETAGKSS 182
           S YDG +RLM+ E+E FDL Y    +I SLSQ+PND   LYFGEG+G ++VWDE  G+ S
Sbjct: 295 SCYDGYLRLMNAEKEVFDLVYSSDDTIFSLSQQPNDTNGLYFGEGRGGLSVWDERTGRLS 354

Query: 183 ALWSLHEGRINSIDFNAHNTNIMATSSSDRTACIWDLRKIAAHKPEAIIAVNHKRAVNSA 362
             W LHE RINSIDFN+ N NIMATSS+D TAC+WD+R ++  KP+++  V+H RAV+SA
Sbjct: 355 FQWDLHEDRINSIDFNSQNPNIMATSSTDGTACLWDIRSVSPAKPKSLKIVSHNRAVHSA 414

Query: 363 FFSPSGSLL 389
           +FSPSGS L
Sbjct: 415 YFSPSGSYL 423


>ref|XP_004162450.1| PREDICTED: WD repeat-containing protein 76-like [Cucumis sativus]
          Length = 521

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/129 (58%), Positives = 95/129 (73%)
 Frame = +3

Query: 3   SSYDGCIRLMDVERETFDLAYHGAHSICSLSQRPNDVKSLYFGEGQGKVNVWDETAGKSS 182
           S YDG IRLMDVE+E FDL Y    +I SLSQ+ ND   LYF EG+G +N+WD+  G  +
Sbjct: 283 SCYDGFIRLMDVEKEMFDLVYRNEDTIFSLSQQSNDANCLYFSEGRGGLNIWDKRTGNCT 342

Query: 183 ALWSLHEGRINSIDFNAHNTNIMATSSSDRTACIWDLRKIAAHKPEAIIAVNHKRAVNSA 362
             W+LHE RINSIDFN  N+NIMATSSSD TACIWDLR ++  KP+ +  + HK+A++SA
Sbjct: 343 MEWTLHEDRINSIDFNVGNSNIMATSSSDGTACIWDLRSVSDEKPQTLKTITHKKAIHSA 402

Query: 363 FFSPSGSLL 389
           +FSPSG  L
Sbjct: 403 YFSPSGRFL 411


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