BLASTX nr result

ID: Cnidium21_contig00025503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025503
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19710.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE ...   128   4e-28
ref|XP_002510403.1| pentatricopeptide repeat-containing protein,...   121   5e-26
ref|XP_002306873.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCL...   108   5e-22

>emb|CBI19710.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 75/95 (78%)
 Frame = -2

Query: 285 DPEDDGSMNEFLSRLVWIMRGRLSGVFINSDKQTIDAMLLIIVSKVVAEMDKSGLERMLS 106
           D  DDG+MNEFLSR VWIMRG+L  V+   DKQTID MLLIIV KVV+EM+K GLE+MLS
Sbjct: 90  DDSDDGTMNEFLSRFVWIMRGKLMEVYTGCDKQTIDGMLLIIVRKVVSEMEKGGLEQMLS 149

Query: 105 SEVTERSDDISEDLWRTVWQVCVMVLEDMEKAKKK 1
           + V   S D SEDLW+TVW+V  +VL+DM+KA+ K
Sbjct: 150 AAVAAPSQDFSEDLWKTVWEVSNLVLDDMKKARNK 184


>ref|XP_002281331.1| PREDICTED: protein NUCLEAR FUSION DEFECTIVE 5, mitochondrial-like
           [Vitis vinifera]
          Length = 720

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/95 (65%), Positives = 75/95 (78%)
 Frame = -2

Query: 285 DPEDDGSMNEFLSRLVWIMRGRLSGVFINSDKQTIDAMLLIIVSKVVAEMDKSGLERMLS 106
           D  DDG+MNEFLSR VWIMRG+L  V+   DKQTID MLLIIV KVV+EM+K GLE+MLS
Sbjct: 90  DDSDDGTMNEFLSRFVWIMRGKLMEVYTGCDKQTIDGMLLIIVRKVVSEMEKGGLEQMLS 149

Query: 105 SEVTERSDDISEDLWRTVWQVCVMVLEDMEKAKKK 1
           + V   S D SEDLW+TVW+V  +VL+DM+KA+ K
Sbjct: 150 AAVAAPSQDFSEDLWKTVWEVSNLVLDDMKKARNK 184


>ref|XP_002510403.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223551104|gb|EEF52590.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  121 bits (304), Expect = 5e-26
 Identities = 59/95 (62%), Positives = 76/95 (80%)
 Frame = -2

Query: 285 DPEDDGSMNEFLSRLVWIMRGRLSGVFINSDKQTIDAMLLIIVSKVVAEMDKSGLERMLS 106
           D E+DG+M+EFLSR V++MRG+LS V+ + DKQTID+MLLIIV KVV+EM+K   E+ML 
Sbjct: 88  DSEEDGNMSEFLSRFVYVMRGKLSDVYQDCDKQTIDSMLLIIVGKVVSEMEKGSPEQMLG 147

Query: 105 SEVTERSDDISEDLWRTVWQVCVMVLEDMEKAKKK 1
           +     S D+SEDLWRTVW+V  +VLEDMEK +KK
Sbjct: 148 ASGAAPSQDLSEDLWRTVWEVSNLVLEDMEKERKK 182


>ref|XP_002306873.1| predicted protein [Populus trichocarpa] gi|222856322|gb|EEE93869.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/96 (56%), Positives = 72/96 (75%)
 Frame = -2

Query: 288 EDPEDDGSMNEFLSRLVWIMRGRLSGVFINSDKQTIDAMLLIIVSKVVAEMDKSGLERML 109
           +  ++D +MNEFLSR VWIMRG+L+ V+ +SDK+TI+ MLL+IV +VV+EM+K GLE+ML
Sbjct: 84  DSEDEDETMNEFLSRFVWIMRGKLTEVYKDSDKETINGMLLVIVGEVVSEMEKGGLEQML 143

Query: 108 SSEVTERSDDISEDLWRTVWQVCVMVLEDMEKAKKK 1
              V   S   S DLW+TVW+V   VL DMEK +KK
Sbjct: 144 DVSVATLSQGFSRDLWKTVWEVSNAVLADMEKERKK 179


>ref|XP_004167043.1| PREDICTED: LOW QUALITY PROTEIN: protein NUCLEAR FUSION DEFECTIVE 5,
           mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  108 bits (270), Expect = 5e-22
 Identities = 55/96 (57%), Positives = 71/96 (73%)
 Frame = -2

Query: 288 EDPEDDGSMNEFLSRLVWIMRGRLSGVFINSDKQTIDAMLLIIVSKVVAEMDKSGLERML 109
           E  +DDGSMNEFLSR VWIMR ++S  F + DKQT++AMLL+IV KVV+EM+K   E+ L
Sbjct: 93  EVEDDDGSMNEFLSRFVWIMREKISEEFPDYDKQTVNAMLLMIVEKVVSEMEKGRFEQTL 152

Query: 108 SSEVTERSDDISEDLWRTVWQVCVMVLEDMEKAKKK 1
            +       D+SEDLW+TV +V  MVL+DM+KA KK
Sbjct: 153 KASTDNPDWDLSEDLWKTVTEVSNMVLDDMKKATKK 188


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