BLASTX nr result
ID: Cnidium21_contig00025494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00025494
(641 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF81447.1| NBS type disease resistance protein [Populus tric... 268 5e-70
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 266 2e-69
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 266 2e-69
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 265 7e-69
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 263 2e-68
>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
Length = 972
Score = 268 bits (686), Expect = 5e-70
Identities = 131/214 (61%), Positives = 157/214 (73%), Gaps = 1/214 (0%)
Frame = +1
Query: 1 VKSAFLNGILEEEVYVNQPPGYRRIGEERKVLRLKKALYGLKQAPLTWNSRIDGYFKKMG 180
VKSAFLNG LEEE+YV QP GY + KV +LKKALYGLKQAP WN+RID YF+ G
Sbjct: 94 VKSAFLNGFLEEEIYVEQPLGYIEAENKGKVYKLKKALYGLKQAPPAWNTRIDRYFQDNG 153
Query: 181 FEQCPYEHSVYVKK-VEGKILIIALYVDDLIFMGNCQKLSDDFKKGMILEFEMTDLGLLK 357
FE+CPYEH++YVKK G IL LYVDDLIF GN + DDFK+ M+ EFEMTD+GL+
Sbjct: 154 FEKCPYEHAIYVKKGANGSILFACLYVDDLIFTGNNPTMFDDFKQNMVHEFEMTDIGLMS 213
Query: 358 YFLGLEIWQTTSGILMSQKGYAKDILKKFRMEDCNPVSIPMELGARLSKLGGSRVDATRY 537
+FLGLE+ Q GI +SQ GYAKDIL++F+ME CNPVS P+E G L K VD T +
Sbjct: 214 HFLGLEVTQKEEGIFVSQSGYAKDILERFKMESCNPVSTPVENGVELRKSKVGNVDPTYF 273
Query: 538 RSLIGCLRYFCCTRPDLAFSVGMVSRYMEEPRNS 639
+SL+G LRY CTRPD+ + VG+VSRYME P S
Sbjct: 274 KSLVGSLRYLTCTRPDILYGVGLVSRYMETPDQS 307
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 266 bits (680), Expect = 2e-69
Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Frame = +1
Query: 1 VKSAFLNGILEEEVYVNQPPGYRRIGEERKVLRLKKALYGLKQAPLTWNSRIDGYFKKMG 180
VKSAFLNG LEEEVY+ QP GY GEE KVLRLKKALYGLKQAP WN+RID YFK+
Sbjct: 947 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 1006
Query: 181 FEQCPYEHSVYVKKVEGKILIIALYVDDLIFMGNCQKLSDDFKKGMILEFEMTDLGLLKY 360
F +CPYEH++Y+K + ILI LYVDDLIF GN + ++FKK M EFEMTD+GL+ Y
Sbjct: 1007 FIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSY 1066
Query: 361 FLGLEIWQTTSGILMSQKGYAKDILKKFRMEDCNPVSIPMELGARLSKL-GGSRVDATRY 537
+LG+E+ Q +GI ++Q+GYAK++LKKF+M+D NPV PME G +LSK G VD T +
Sbjct: 1067 YLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTF 1126
Query: 538 RSLIGCLRYFCCTRPDLAFSVGMVSRYMEEP 630
+SL+G LRY CTRPD+ ++VG+VSRYME P
Sbjct: 1127 KSLVGSLRYLTCTRPDILYAVGVVSRYMEHP 1157
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 266 bits (680), Expect = 2e-69
Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Frame = +1
Query: 1 VKSAFLNGILEEEVYVNQPPGYRRIGEERKVLRLKKALYGLKQAPLTWNSRIDGYFKKMG 180
VKSAFLNG LEEEVY+ QP GY GEE KVLRLKKALYGLKQAP WN+RID YFK+
Sbjct: 915 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKD 974
Query: 181 FEQCPYEHSVYVKKVEGKILIIALYVDDLIFMGNCQKLSDDFKKGMILEFEMTDLGLLKY 360
F +CPYEH++Y+K + ILI LYVDDLIF GN + ++FKK M EFEMTD+GL+ Y
Sbjct: 975 FIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSY 1034
Query: 361 FLGLEIWQTTSGILMSQKGYAKDILKKFRMEDCNPVSIPMELGARLSKL-GGSRVDATRY 537
+LG+E+ Q +GI ++Q+GYAK++LKKF+M+D NPV PME G +LSK G VD T +
Sbjct: 1035 YLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTF 1094
Query: 538 RSLIGCLRYFCCTRPDLAFSVGMVSRYMEEP 630
+SL+G LRY CTRPD+ ++VG+VSRYME P
Sbjct: 1095 KSLVGSLRYLTCTRPDILYAVGVVSRYMEHP 1125
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 265 bits (676), Expect = 7e-69
Identities = 129/211 (61%), Positives = 161/211 (76%), Gaps = 1/211 (0%)
Frame = +1
Query: 1 VKSAFLNGILEEEVYVNQPPGYRRIGEERKVLRLKKALYGLKQAPLTWNSRIDGYFKKMG 180
VKSAFLNG LEEEVY+ QP GY GEE KVLRLKK LYGLKQAP WN+RID YFK+
Sbjct: 947 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006
Query: 181 FEQCPYEHSVYVKKVEGKILIIALYVDDLIFMGNCQKLSDDFKKGMILEFEMTDLGLLKY 360
F +CPYEH++Y+K + ILI LYVDDLIF GN + ++FKK M EFEMTD+GL+ Y
Sbjct: 1007 FIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSY 1066
Query: 361 FLGLEIWQTTSGILMSQKGYAKDILKKFRMEDCNPVSIPMELGARLSKL-GGSRVDATRY 537
+LG+E+ Q +GI ++Q+GYAK++LKKF+M+D NPV PME G +LSK G VD T +
Sbjct: 1067 YLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTF 1126
Query: 538 RSLIGCLRYFCCTRPDLAFSVGMVSRYMEEP 630
+SL+G LRY CTRPD+ ++VG+VSRYME P
Sbjct: 1127 KSLVGSLRYLTCTRPDILYAVGVVSRYMEHP 1157
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 263 bits (672), Expect = 2e-68
Identities = 128/211 (60%), Positives = 161/211 (76%), Gaps = 1/211 (0%)
Frame = +1
Query: 1 VKSAFLNGILEEEVYVNQPPGYRRIGEERKVLRLKKALYGLKQAPLTWNSRIDGYFKKMG 180
VKSAFLNG LEEEVY+ QP GY GEE KVLRLKK LYGLKQAP WN+RID YFK+
Sbjct: 947 VKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKD 1006
Query: 181 FEQCPYEHSVYVKKVEGKILIIALYVDDLIFMGNCQKLSDDFKKGMILEFEMTDLGLLKY 360
F +CPYEH++Y+K + ILI LYVDDLIF GN + ++FKK M EFEMTD+GL+ Y
Sbjct: 1007 FIKCPYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSY 1066
Query: 361 FLGLEIWQTTSGILMSQKGYAKDILKKFRMEDCNPVSIPMELGARLSKL-GGSRVDATRY 537
+LG+E+ Q +GI ++Q+GYAK++LKKF+++D NPV PME G +LSK G VD T +
Sbjct: 1067 YLGIEVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTF 1126
Query: 538 RSLIGCLRYFCCTRPDLAFSVGMVSRYMEEP 630
+SL+G LRY CTRPD+ ++VG+VSRYME P
Sbjct: 1127 KSLVGSLRYLTCTRPDILYAVGVVSRYMEHP 1157