BLASTX nr result

ID: Cnidium21_contig00025475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025475
         (873 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprot...   297   2e-78
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...   295   7e-78
ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...   295   1e-77
gb|ABK93026.1| unknown [Populus trichocarpa]                          294   2e-77
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...   293   4e-77

>ref|XP_002281732.1| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP3 [Vitis
           vinifera] gi|298204446|emb|CBI16926.3| unnamed protein
           product [Vitis vinifera]
          Length = 182

 Score =  297 bits (761), Expect = 2e-78
 Identities = 142/168 (84%), Positives = 155/168 (92%)
 Frame = -1

Query: 783 VNFLEWKREGGHREAHVTQRYHLTERDDYKKYNSICRMVQKLVNILKQMDQRDPERIQMT 604
           VNFLEWKREGGHREAHV  RYH+T RDDYKKY+ +CRMVQKLVNILKQMD RDP RI+MT
Sbjct: 15  VNFLEWKREGGHREAHVMHRYHVTGRDDYKKYSGLCRMVQKLVNILKQMDPRDPFRIEMT 74

Query: 603 ASLLEKLYNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVRLKFAEHLKEAVTYIEQGHV 424
             LLEKLYNIGVIP+RK L LC  L+VSSFCRRRL+T+LVRLKFAEHLKEAVTYIEQGH+
Sbjct: 75  DMLLEKLYNIGVIPTRKSLALCDRLAVSSFCRRRLSTVLVRLKFAEHLKEAVTYIEQGHI 134

Query: 423 RVGPQTVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 280
           RVGP TVTDPAFLVTRN+EDFVTWVD+SKIKRKVL+YNE+LDDYDAMN
Sbjct: 135 RVGPDTVTDPAFLVTRNLEDFVTWVDSSKIKRKVLQYNERLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score =  295 bits (756), Expect = 7e-78
 Identities = 140/168 (83%), Positives = 154/168 (91%)
 Frame = -1

Query: 783 VNFLEWKREGGHREAHVTQRYHLTERDDYKKYNSICRMVQKLVNILKQMDQRDPERIQMT 604
           VNFL+WKRE  HREAHV QRYH+ ERDDYKKY+S+CRMVQKL NILKQMD RDP R++MT
Sbjct: 15  VNFLDWKRENNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPFRVEMT 74

Query: 603 ASLLEKLYNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVRLKFAEHLKEAVTYIEQGHV 424
             LLEKLYN+GVIPSRK L LC  LSVSSFCRRRL+T+L+RLKFAEHLKEAVTYIEQGH+
Sbjct: 75  DVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAVTYIEQGHI 134

Query: 423 RVGPQTVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 280
           RVGP+TVTDPAFLVTRN EDFVTWVDTSKIKRKVLEYNE++DDYDAMN
Sbjct: 135 RVGPETVTDPAFLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAMN 182


>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score =  295 bits (754), Expect = 1e-77
 Identities = 141/168 (83%), Positives = 154/168 (91%)
 Frame = -1

Query: 783 VNFLEWKREGGHREAHVTQRYHLTERDDYKKYNSICRMVQKLVNILKQMDQRDPERIQMT 604
           VNFL WKREG HREA V QRYH+ +RDDYKKY+ ICRMVQKLVNILKQMD RDP R++MT
Sbjct: 15  VNFLLWKREGDHREAKVMQRYHIVDRDDYKKYSGICRMVQKLVNILKQMDPRDPYRVEMT 74

Query: 603 ASLLEKLYNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVRLKFAEHLKEAVTYIEQGHV 424
             LLEKLYN+GVIPSRK L LC  LSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQGH+
Sbjct: 75  DILLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHI 134

Query: 423 RVGPQTVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 280
           RVGP+TVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNE+LDDYDAMN
Sbjct: 135 RVGPETVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score =  294 bits (753), Expect = 2e-77
 Identities = 139/168 (82%), Positives = 153/168 (91%)
 Frame = -1

Query: 783 VNFLEWKREGGHREAHVTQRYHLTERDDYKKYNSICRMVQKLVNILKQMDQRDPERIQMT 604
           VNFL+WKRE  HREAHV QRYH+ ERDDYKKY+S+CRMVQKL NILKQMD RDP R++MT
Sbjct: 15  VNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVEMT 74

Query: 603 ASLLEKLYNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVRLKFAEHLKEAVTYIEQGHV 424
             LLEKLYN+GVIPSRK L LC  LSVSSFCRRRL+T+L+RLKFAEHLKEA+TYIEQGH+
Sbjct: 75  DVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFAEHLKEAITYIEQGHI 134

Query: 423 RVGPQTVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 280
           R GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRKVLEYNE LDDYDAMN
Sbjct: 135 RAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAMN 182


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score =  293 bits (750), Expect = 4e-77
 Identities = 138/168 (82%), Positives = 153/168 (91%)
 Frame = -1

Query: 783 VNFLEWKREGGHREAHVTQRYHLTERDDYKKYNSICRMVQKLVNILKQMDQRDPERIQMT 604
           VNFL+WKRE  HREAHV QRYH+ ERDDYKKY+S+CRMVQKL NILKQMD RDP R++MT
Sbjct: 15  VNFLDWKREQNHREAHVMQRYHIVERDDYKKYSSVCRMVQKLTNILKQMDPRDPYRVEMT 74

Query: 603 ASLLEKLYNIGVIPSRKDLNLCKNLSVSSFCRRRLATILVRLKFAEHLKEAVTYIEQGHV 424
             LLEKLYN+GVIPSRK L LC  LSVSSFCRRRL+T+L+RLKF+EHLKEA+TYIEQGH+
Sbjct: 75  DVLLEKLYNMGVIPSRKSLALCDRLSVSSFCRRRLSTVLMRLKFSEHLKEAITYIEQGHI 134

Query: 423 RVGPQTVTDPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 280
           R GP+TVTDPAFLVTR+MEDFVTWVDTSKIKRKVLEYNE LDDYDAMN
Sbjct: 135 RAGPETVTDPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAMN 182


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