BLASTX nr result

ID: Cnidium21_contig00025474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025474
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein...    85   7e-15
emb|CAC40748.1| putative ribosomal-like protein [Atropa belladonna]    83   2e-14
ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
gb|ABK93026.1| unknown [Populus trichocarpa]                           82   3e-14
ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|1...    81   8e-14

>ref|XP_002525943.1| U3 small nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis] gi|223534772|gb|EEF36463.1| U3 small
           nucleolar ribonucleoprotein protein IMP3, putative
           [Ricinus communis]
          Length = 182

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = +3

Query: 3   DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 122
           DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNE+LDDYDAMN
Sbjct: 143 DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEKLDDYDAMN 182


>emb|CAC40748.1| putative ribosomal-like protein [Atropa belladonna]
          Length = 58

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/40 (92%), Positives = 40/40 (100%)
 Frame = +3

Query: 3   DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 122
           DPAFLVTRNMEDF+TWVDTSKIKRKVLEYN++LDDYDAMN
Sbjct: 19  DPAFLVTRNMEDFITWVDTSKIKRKVLEYNDKLDDYDAMN 58


>ref|XP_002331278.1| predicted protein [Populus trichocarpa] gi|222873703|gb|EEF10834.1|
           predicted protein [Populus trichocarpa]
          Length = 182

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 122
           DPAFLVTR+MEDFVTWVDTSKIKRKVLEYNE LDDYDAMN
Sbjct: 143 DPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAMN 182


>gb|ABK93026.1| unknown [Populus trichocarpa]
          Length = 182

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/40 (95%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 122
           DPAFLVTR+MEDFVTWVDTSKIKRKVLEYNE LDDYDAMN
Sbjct: 143 DPAFLVTRSMEDFVTWVDTSKIKRKVLEYNENLDDYDAMN 182


>ref|XP_002330956.1| predicted protein [Populus trichocarpa] gi|118485533|gb|ABK94619.1|
           unknown [Populus trichocarpa]
           gi|222873150|gb|EEF10281.1| predicted protein [Populus
           trichocarpa]
          Length = 182

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/40 (92%), Positives = 39/40 (97%)
 Frame = +3

Query: 3   DPAFLVTRNMEDFVTWVDTSKIKRKVLEYNEQLDDYDAMN 122
           DPAFLVTRN EDFVTWVDTSKIKRKVLEYNE++DDYDAMN
Sbjct: 143 DPAFLVTRNTEDFVTWVDTSKIKRKVLEYNEKVDDYDAMN 182


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