BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025452
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform...   191   7e-47
ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ric...   189   2e-46
ref|XP_002880652.1| predicted protein [Arabidopsis lyrata subsp....   184   8e-45
ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|2...   184   8e-45
ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like is...   183   1e-44

>ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera]
           gi|296086584|emb|CBI32219.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  191 bits (484), Expect = 7e-47
 Identities = 91/103 (88%), Positives = 96/103 (93%)
 Frame = -3

Query: 311 VPKWGCEPCIMGIDEAGRGPVLGPMVYGCLYCPLSYEKTMSSLNFADSKTLKEEKREELF 132
           +PKW  EPC+MGIDEAGRGPVLGPMVYGCLYC  SY  T+S+LNFADSKTLKEEKREELF
Sbjct: 7   LPKWASEPCMMGIDEAGRGPVLGPMVYGCLYCARSYHNTLSTLNFADSKTLKEEKREELF 66

Query: 131 ENLKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAIG 3
           ENLKADESIGWAVDVIDP ELSAKMLKKNKINLNEISH+SAIG
Sbjct: 67  ENLKADESIGWAVDVIDPWELSAKMLKKNKINLNEISHDSAIG 109


>ref|XP_002515756.1| ribonuclease hi large subunit, putative [Ricinus communis]
           gi|223545084|gb|EEF46595.1| ribonuclease hi large
           subunit, putative [Ricinus communis]
          Length = 299

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/103 (86%), Positives = 98/103 (95%)
 Frame = -3

Query: 311 VPKWGCEPCIMGIDEAGRGPVLGPMVYGCLYCPLSYEKTMSSLNFADSKTLKEEKREELF 132
           +PKW  +PCIMGIDEAGRGPVLGPMVYGCLYC  SYE+T+S+L+FADSKTLKE+KREELF
Sbjct: 9   LPKWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYERTLSTLSFADSKTLKEDKREELF 68

Query: 131 ENLKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAIG 3
           ENLKA+ESIGWAVDVIDPRELSAKML+KNKINLNEISH SAIG
Sbjct: 69  ENLKANESIGWAVDVIDPRELSAKMLQKNKINLNEISHESAIG 111


>ref|XP_002880652.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326491|gb|EFH56911.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score =  184 bits (466), Expect = 8e-45
 Identities = 82/104 (78%), Positives = 97/104 (93%)
 Frame = -3

Query: 314 VVPKWGCEPCIMGIDEAGRGPVLGPMVYGCLYCPLSYEKTMSSLNFADSKTLKEEKREEL 135
           + P+W  +PC+MGIDEAGRGPVLGPMVYGC+YCP+SY+ +++SL+FADSKTLKEEKREEL
Sbjct: 6   LTPEWSSQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEEKREEL 65

Query: 134 FENLKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAIG 3
           +ENLK D+S+GWAVDVIDPRELSAKML KNK NLNEISHNSA+G
Sbjct: 66  YENLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMG 109


>ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|222850829|gb|EEE88376.1|
           predicted protein [Populus trichocarpa]
          Length = 297

 Score =  184 bits (466), Expect = 8e-45
 Identities = 91/110 (82%), Positives = 98/110 (89%)
 Frame = -3

Query: 332 MEPESVVVPKWGCEPCIMGIDEAGRGPVLGPMVYGCLYCPLSYEKTMSSLNFADSKTLKE 153
           ME ES++ P W  +PCIMGIDEAGRGPVLGPMVYGCLYC  SYEKT+S+L FADSKTLKE
Sbjct: 1   MESESIL-PDWASKPCIMGIDEAGRGPVLGPMVYGCLYCARSYEKTLSTLKFADSKTLKE 59

Query: 152 EKREELFENLKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAIG 3
           EKREELFE LKA+E IGWAVDVIDPRELSAKMLKK KINLNEISH+SA G
Sbjct: 60  EKREELFEKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASG 109


>ref|XP_003536702.1| PREDICTED: ribonuclease H2 subunit A-like isoform 1 [Glycine max]
          Length = 297

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/106 (81%), Positives = 97/106 (91%)
 Frame = -3

Query: 320 SVVVPKWGCEPCIMGIDEAGRGPVLGPMVYGCLYCPLSYEKTMSSLNFADSKTLKEEKRE 141
           S ++PKW  +PC+MGIDEAGRGPVLGPMVYGCLYC  SY KT+S+L+FADSKTLKEEKRE
Sbjct: 3   SKILPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCSQSYLKTLSTLSFADSKTLKEEKRE 62

Query: 140 ELFENLKADESIGWAVDVIDPRELSAKMLKKNKINLNEISHNSAIG 3
           ELFE LK ++SIGW VDVIDPRELSAKMLKKNKINLNEISH+SA+G
Sbjct: 63  ELFETLKLNDSIGWDVDVIDPRELSAKMLKKNKINLNEISHSSAMG 108