BLASTX nr result
ID: Cnidium21_contig00025393
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00025393
(1434 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [S... 46 2e-10
gb|AAU89193.1| transposon protein, putative, mutator sub-class [... 47 2e-10
ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group] g... 47 2e-10
gb|AAT77288.1| putative polyprotein [Oryza sativa Japonica Group] 47 2e-10
gb|ABF97896.1| transposon protein, putative, Mutator sub-class [... 47 2e-10
>ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [Sorghum bicolor]
gi|241940863|gb|EES14008.1| hypothetical protein
SORBIDRAFT_07g023090 [Sorghum bicolor]
Length = 861
Score = 45.8 bits (107), Expect(3) = 2e-10
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Frame = -3
Query: 808 YTWLAAKPRSQWSRSGFRETCKSDMFVNNNCEVYNKDLNKFRQ-AIVSMFKEMY*KCMQR 632
Y WL P + W R+ F E K D+ +NNNCEV+N + + R+ I+SM + + KC Q
Sbjct: 492 YKWLEKMPPNTWVRAYFSEFPKCDILLNNNCEVFNSYILEARELPILSMLERI--KC-QL 548
Query: 631 IQRRKTKMQ 605
+ R K Q
Sbjct: 549 MTRHYNKQQ 557
Score = 36.2 bits (82), Expect(3) = 2e-10
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = -2
Query: 1004 QGLVDALDKLVTAAEHRFCVMYLYRIMPKEYKSTV*KK 891
+GL+ A+ ++ +EHRFCV +LY ++YK + KK
Sbjct: 426 KGLIPAVKQVFPESEHRFCVRHLYANFNEKYKGEILKK 463
Score = 30.4 bits (67), Expect(3) = 2e-10
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -1
Query: 1167 EWFISLLVNDLKIKNATNYTFISDKQK 1087
+WF+ L DL+I N +T ++DKQK
Sbjct: 400 KWFLETLKTDLQIDNTFPWTIMTDKQK 426
>gb|AAU89193.1| transposon protein, putative, mutator sub-class [Oryza sativa
Japonica Group]
Length = 1030
Score = 46.6 bits (109), Expect(3) = 2e-10
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = -3
Query: 895 KNTLVCC--KSYY*HFNRHMLYLLY*ISVKTYTWLAAKPRSQWSRSGFRETCKSDMFVNN 722
KN L C S +N++M ++ ++ Y WL P + W R+ F E K D+ +NN
Sbjct: 618 KNQLWACARSSSVQEWNKNM-DVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNN 676
Query: 721 NCEVYNKDLNKFRQ-AIVSMFKEMY*KCMQR 632
NCEV+NK + + R+ I++M +++ + M R
Sbjct: 677 NCEVFNKYILEARELPILTMLEKIKGQLMTR 707
Score = 33.1 bits (74), Expect(3) = 2e-10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 1004 QGLVDALDKLVTAAEHRFCVMYLYRIMPKEYKSTV*K 894
+GL+ A+ ++ +EHRFCV +LY ++K V K
Sbjct: 582 KGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLK 618
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 1167 EWFISLLVNDLKIKNATNYTFISDKQK 1087
+WF+ L NDL I+N +T ++DKQK
Sbjct: 556 KWFLETLKNDLGIENTYPWTIMTDKQK 582
>ref|NP_001050777.2| Os03g0648200 [Oryza sativa Japonica Group]
gi|255674744|dbj|BAF12691.2| Os03g0648200 [Oryza sativa
Japonica Group]
Length = 1015
Score = 46.6 bits (109), Expect(3) = 2e-10
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = -3
Query: 895 KNTLVCC--KSYY*HFNRHMLYLLY*ISVKTYTWLAAKPRSQWSRSGFRETCKSDMFVNN 722
KN L C S +N++M ++ ++ Y WL P + W R+ F E K D+ +NN
Sbjct: 603 KNQLWACARSSSVQEWNKNM-DVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNN 661
Query: 721 NCEVYNKDLNKFRQ-AIVSMFKEMY*KCMQR 632
NCEV+NK + + R+ I++M +++ + M R
Sbjct: 662 NCEVFNKYILEARELPILTMLEKIKGQLMTR 692
Score = 33.1 bits (74), Expect(3) = 2e-10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 1004 QGLVDALDKLVTAAEHRFCVMYLYRIMPKEYKSTV*K 894
+GL+ A+ ++ +EHRFCV +LY ++K V K
Sbjct: 567 KGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLK 603
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 1167 EWFISLLVNDLKIKNATNYTFISDKQK 1087
+WF+ L NDL I+N +T ++DKQK
Sbjct: 541 KWFLETLKNDLGIENTYPWTIMTDKQK 567
>gb|AAT77288.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1006
Score = 46.6 bits (109), Expect(3) = 2e-10
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = -3
Query: 895 KNTLVCC--KSYY*HFNRHMLYLLY*ISVKTYTWLAAKPRSQWSRSGFRETCKSDMFVNN 722
KN L C S +N++M ++ ++ Y WL P + W R+ F E K D+ +NN
Sbjct: 594 KNQLWACARSSSVQEWNKNM-DVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNN 652
Query: 721 NCEVYNKDLNKFRQ-AIVSMFKEMY*KCMQR 632
NCEV+NK + + R+ I++M +++ + M R
Sbjct: 653 NCEVFNKYILEARELPILTMLEKIKGQLMTR 683
Score = 33.1 bits (74), Expect(3) = 2e-10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 1004 QGLVDALDKLVTAAEHRFCVMYLYRIMPKEYKSTV*K 894
+GL+ A+ ++ +EHRFCV +LY ++K V K
Sbjct: 558 KGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVPK 594
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 1167 EWFISLLVNDLKIKNATNYTFISDKQK 1087
+WF+ L NDL I+N +T ++DKQK
Sbjct: 532 KWFLETLKNDLGIENTYPWTIMTDKQK 558
>gb|ABF97896.1| transposon protein, putative, Mutator sub-class [Oryza sativa
Japonica Group]
Length = 983
Score = 46.6 bits (109), Expect(3) = 2e-10
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = -3
Query: 895 KNTLVCC--KSYY*HFNRHMLYLLY*ISVKTYTWLAAKPRSQWSRSGFRETCKSDMFVNN 722
KN L C S +N++M ++ ++ Y WL P + W R+ F E K D+ +NN
Sbjct: 584 KNQLWACARSSSVQEWNKNM-DVMRNLNKSAYEWLEKLPPNTWVRAFFSEFPKCDILLNN 642
Query: 721 NCEVYNKDLNKFRQ-AIVSMFKEMY*KCMQR 632
NCEV+NK + + R+ I++M +++ + M R
Sbjct: 643 NCEVFNKYILEARELPILTMLEKIKGQLMTR 673
Score = 33.1 bits (74), Expect(3) = 2e-10
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 1004 QGLVDALDKLVTAAEHRFCVMYLYRIMPKEYKSTV*K 894
+GL+ A+ ++ +EHRFCV +LY ++K V K
Sbjct: 548 KGLIPAVQQVFPESEHRFCVRHLYSNFQLQFKGEVLK 584
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1
Query: 1167 EWFISLLVNDLKIKNATNYTFISDKQK 1087
+WF+ L NDL I+N +T ++DKQK
Sbjct: 522 KWFLETLKNDLGIENTYPWTIMTDKQK 548