BLASTX nr result

ID: Cnidium21_contig00025388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025388
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264608.2| PREDICTED: uncharacterized protein LOC100250...   181   3e-43
emb|CBI17287.3| unnamed protein product [Vitis vinifera]              181   3e-43
ref|XP_002328905.1| predicted protein [Populus trichocarpa] gi|2...   112   2e-22
ref|XP_002298680.1| predicted protein [Populus trichocarpa] gi|2...   101   3e-19
ref|XP_002531081.1| DNA binding protein, putative [Ricinus commu...    97   7e-18

>ref|XP_002264608.2| PREDICTED: uncharacterized protein LOC100250375 [Vitis vinifera]
          Length = 542

 Score =  181 bits (458), Expect = 3e-43
 Identities = 117/310 (37%), Positives = 165/310 (53%), Gaps = 12/310 (3%)
 Frame = +3

Query: 3    SKFQLECSKRINDEEKGSGSQLVQSFMGMGLKKVERTDRIADKDTCMVVEGKEKFKAEQV 182
            SKF  E  +RI  E+ G+G+QLV+ F G   +K E   R+  KD  +  EGKEK K ++ 
Sbjct: 169  SKFLQELGRRIRAEDGGNGNQLVEKFTGTDRRKDEAMARLVAKDVGIRTEGKEKNKDKRG 228

Query: 183  DNWKIDGQRIYHEEKSNGNAMSQNLTGS-IQNKNGLSNSTD-KFERRMDGXXXXXXXXXX 356
            ++ KIDGQ +  E + +GN+++Q+LTG+ +    G     + K ERRM+           
Sbjct: 229  EDRKIDGQGVRDESRISGNSVAQSLTGTGLHRLEGTPKPLEKKIERRMEAKEKTKDKEGD 288

Query: 357  XXXXXXXXXXXXXXQSQGTXXXXXXXXXXXXXXXXGHNKSNKE-DSLRSSNNDDTVGTSN 533
                          +SQG                      NKE D  + SN DD   T N
Sbjct: 289  DKRGDKRKDRDREKKSQGKEKDRDKEKRKEEKEKEKIEHKNKELDKSKESNKDDVTVTHN 348

Query: 534  NKTPHISKD-NKNAATEGNLQKRKDFE-NGFLHEHVIRPEKLPRLSPHPLSENGQELEPS 707
             KT H+ KD NK+AATEGN +KRKD + NGFLH + ++P KLPR + HPL ENG++LEP 
Sbjct: 349  IKTSHLHKDSNKSAATEGNHRKRKDSDTNGFLHVNEVKPNKLPRPTSHPLIENGRKLEPC 408

Query: 708  KTITPFTPQKQGAD-KHFEVYNKDTTENGLTGPHQLPISAPQPSPV------IAEASRKS 866
            +T    T  +QG    + +V NK+   NG+ G     +++ +P  V      IA+AS+K 
Sbjct: 409  QTSILITSDRQGGTANNLKVENKEHKLNGIIGAQPFSVASTKPLSVASQADQIADASKKP 468

Query: 867  PHPDMKYLSK 896
            PHPD KYLS+
Sbjct: 469  PHPDSKYLSQ 478


>emb|CBI17287.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  181 bits (458), Expect = 3e-43
 Identities = 117/310 (37%), Positives = 165/310 (53%), Gaps = 12/310 (3%)
 Frame = +3

Query: 3    SKFQLECSKRINDEEKGSGSQLVQSFMGMGLKKVERTDRIADKDTCMVVEGKEKFKAEQV 182
            SKF  E  +RI  E+ G+G+QLV+ F G   +K E   R+  KD  +  EGKEK K ++ 
Sbjct: 151  SKFLQELGRRIRAEDGGNGNQLVEKFTGTDRRKDEAMARLVAKDVGIRTEGKEKNKDKRG 210

Query: 183  DNWKIDGQRIYHEEKSNGNAMSQNLTGS-IQNKNGLSNSTD-KFERRMDGXXXXXXXXXX 356
            ++ KIDGQ +  E + +GN+++Q+LTG+ +    G     + K ERRM+           
Sbjct: 211  EDRKIDGQGVRDESRISGNSVAQSLTGTGLHRLEGTPKPLEKKIERRMEAKEKTKDKEGD 270

Query: 357  XXXXXXXXXXXXXXQSQGTXXXXXXXXXXXXXXXXGHNKSNKE-DSLRSSNNDDTVGTSN 533
                          +SQG                      NKE D  + SN DD   T N
Sbjct: 271  DKRGDKRKDRDREKKSQGKEKDRDKEKRKEEKEKEKIEHKNKELDKSKESNKDDVTVTHN 330

Query: 534  NKTPHISKD-NKNAATEGNLQKRKDFE-NGFLHEHVIRPEKLPRLSPHPLSENGQELEPS 707
             KT H+ KD NK+AATEGN +KRKD + NGFLH + ++P KLPR + HPL ENG++LEP 
Sbjct: 331  IKTSHLHKDSNKSAATEGNHRKRKDSDTNGFLHVNEVKPNKLPRPTSHPLIENGRKLEPC 390

Query: 708  KTITPFTPQKQGAD-KHFEVYNKDTTENGLTGPHQLPISAPQPSPV------IAEASRKS 866
            +T    T  +QG    + +V NK+   NG+ G     +++ +P  V      IA+AS+K 
Sbjct: 391  QTSILITSDRQGGTANNLKVENKEHKLNGIIGAQPFSVASTKPLSVASQADQIADASKKP 450

Query: 867  PHPDMKYLSK 896
            PHPD KYLS+
Sbjct: 451  PHPDSKYLSQ 460


>ref|XP_002328905.1| predicted protein [Populus trichocarpa] gi|222839335|gb|EEE77672.1|
            predicted protein [Populus trichocarpa]
          Length = 612

 Score =  112 bits (279), Expect = 2e-22
 Identities = 101/318 (31%), Positives = 136/318 (42%), Gaps = 22/318 (6%)
 Frame = +3

Query: 3    SKFQLECSKRINDEEKGSGSQLVQSFMGMGLKKVERTDRIADKDTCMVVEGKEKFKAEQV 182
            SKF  +  KR  DE++   +Q  + F G   KK +   R+  K  C  VEGKEK K +  
Sbjct: 182  SKFVQQLGKRARDEDR---NQFFEKFPGTDAKKDKGMVRLVAKTPCSWVEGKEKNKTD-- 236

Query: 183  DNWKIDGQRIYHEEKSNGNAMSQNLTGSIQNKNGLSNSTDKFERRMDGXXXXXXXXXXXX 362
            D+ K+DGQ I  E +  G+A S + T   +    L       E++M G            
Sbjct: 237  DDRKLDGQGIKDEARFTGSAQSLSATFQARIDGMLRPLEKDIEKKMKGKDKTKQKETNDK 296

Query: 363  XXXXXXXXXXXXQSQGTXXXXXXXXXXXXXXXXGHNKSNKEDSLRSSNNDDTVGTSNNKT 542
                        + +                     K  + D L+ SN  + VG    K 
Sbjct: 297  NEDQYKDKEKKGKEKDKVRDKEKKKEEKEKEKR-ERKKKEPDKLKESNMSNIVGNHTVKA 355

Query: 543  PHISKDNKNAAT-EGNLQKRKDFE-NGFLHEHVIRPEKLPRLSPHPLS-ENGQELEPSKT 713
             H+SK++ N A  E N++KRKD + NGFLH + ++P+KLPR    P S ENG+ L   + 
Sbjct: 356  SHLSKESFNGAVDEVNIKKRKDLDTNGFLHANDVKPDKLPRPISLPQSAENGRMLGTCEN 415

Query: 714  ITPFTPQKQGADKHFEVYNKDTTENGL---------TGPHQLPISA------PQPSPV-- 842
             T     KQ A    +V NK    NGL         +  H L IS       P  S    
Sbjct: 416  PTAAIRDKQEAANMDKVDNKGHKINGLIEARAPSISSTTHPLSISLMKSLTNPSHSTAQT 475

Query: 843  --IAEASRKSPHPDMKYL 890
              IAE SRK PHPD KYL
Sbjct: 476  DEIAEVSRKQPHPDSKYL 493


>ref|XP_002298680.1| predicted protein [Populus trichocarpa] gi|222845938|gb|EEE83485.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  101 bits (251), Expect = 3e-19
 Identities = 98/316 (31%), Positives = 139/316 (43%), Gaps = 20/316 (6%)
 Frame = +3

Query: 3    SKFQLECSKRINDEEKGSGSQLVQSFMGMGLKKVERTDRIADKDTCMVVEGKEKFKAEQV 182
            SKF  E  KR  DE+K   +Q  + F G   K  E    +  K     V+GKEK K +  
Sbjct: 183  SKFVQELGKRARDEDK---NQFSEKFPGKDAKGDEGMVTLVAKAPSNWVDGKEKNKRD-- 237

Query: 183  DNWKIDGQRIYHEEKSNGNAMSQNLTGSIQNK-NGLSNSTDKFERRMDGXXXXXXXXXXX 359
            D+  +DGQ I  E + NG+  +Q+L+ + Q + +      +K   +M+G           
Sbjct: 238  DDGNMDGQGIRDEARFNGS--TQSLSATFQARCDETPRPLEKDIEKMEGKDKSKQKESNH 295

Query: 360  XXXXXXXXXXXXXQSQGTXXXXXXXXXXXXXXXXGHNKSNKEDSLRSSNNDDTVGTSNNK 539
                           +                    +K  ++D L+ S   D V  +  K
Sbjct: 296  KRKYKEKK-----DKEKDKVRDKEKKREEKPKEKSEHKKKEQDKLKESGKSDAVANNTVK 350

Query: 540  TPHISKDNKNAAT-EGNLQKRKDFE-NGFLHEHVIRPEKLPR-LSPHPLS-ENGQELEPS 707
              H+ K+  N+A  E N++KRKD + NGFLH + I+P+KLPR  S  PLS ENG+ L   
Sbjct: 351  PSHLPKEITNSAVHEVNIKKRKDSDTNGFLHANDIKPDKLPRPASSLPLSAENGRMLGTC 410

Query: 708  KTITPFTPQKQGADKHFEVYNKDTTENGLTGPHQLPISAP-QPSPV-------------- 842
            +  T     KQ A  + +V NK    NGL     L IS+  QP  +              
Sbjct: 411  QNPTAAIRGKQEAVNNDKVDNKGHKINGLIEAQALSISSTTQPLSISLMKPLHSTAQTDQ 470

Query: 843  IAEASRKSPHPDMKYL 890
            IAE S+K PHPD KYL
Sbjct: 471  IAEVSKKQPHPDSKYL 486


>ref|XP_002531081.1| DNA binding protein, putative [Ricinus communis]
            gi|223529327|gb|EEF31295.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 496

 Score = 96.7 bits (239), Expect = 7e-18
 Identities = 90/321 (28%), Positives = 137/321 (42%), Gaps = 28/321 (8%)
 Frame = +3

Query: 18   ECSKRINDEEKGSGSQLVQSFMGMGLKKVERTDRIADKDTCMVVEGKEKFKAEQVDNWKI 197
            E ++RI DE++ SGSQ+VQ       K+ E    I+ +      + KEK K +  D  KI
Sbjct: 117  ELARRIKDEDRASGSQMVQKVDATDQKRSEVRGSISIQS-----QEKEKIKNKNEDQRKI 171

Query: 198  DGQRIYHEEKSNGNAMSQNLTGSIQNK-NGLSNSTDK--FERRMDGXXXXXXXXXXXXXX 368
            +GQ+ + + +    A  Q   G  Q +  G+    +K   E++M+G              
Sbjct: 172  NGQKNHFDTRVLEKAFGQTSFGMDQERVEGIVRLVEKKDTEKQMEGKEKNKQKENDGKGD 231

Query: 369  XXXXXXXXXXQSQGTXXXXXXXXXXXXXXXXGHNKSNKEDSLRSS------NNDDTVGTS 530
                      +                        S ++  L+ +       + D++   
Sbjct: 232  KHKVKDREKIRKSKDKNREKEEKKENSKEKEITKPSKEQPKLKDNVSKLKEGSKDSLDFR 291

Query: 531  NNKTPHISK-DNKNAATEGNLQKRKDFE-NGFLHEHVIRPEKLPR--LSPHPLSENGQEL 698
            N K+P   K  N + A EGNL KRK+ E NGFL E+  RP K PR   S H + ENG++L
Sbjct: 292  NIKSPERLKLSNVSLAAEGNLGKRKELERNGFLLENGNRPNKFPRPVSSSHSVVENGKKL 351

Query: 699  EPSKTITPFTPQKQGADKHFEVYNKDTTENG-LTGPHQLPISAPQPSPVIA--------- 848
            EP K+   F  +KQ    + +VY K+   NG +T  H++    P  S + +         
Sbjct: 352  EPCKSAVQFASEKQELVNNHKVYIKEQKVNGFVTAEHKINGLIPARSHISSTKSLSVGVQ 411

Query: 849  -----EASRKSPHPDMKYLSK 896
                 E   K PHPD KYLS+
Sbjct: 412  ANENGETFSKPPHPDTKYLSQ 432


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