BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025378
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531290.1| protein with unknown function [Ricinus commu...   160   1e-37
ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...   159   3e-37
ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arab...   159   3e-37
ref|NP_187125.1| RNA polymerase II transcription mediator [Arabi...   159   3e-37
ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II tra...   158   5e-37

>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
            gi|223529123|gb|EEF31103.1| protein with unknown function
            [Ricinus communis]
          Length = 1746

 Score =  160 bits (405), Expect = 1e-37
 Identities = 70/96 (72%), Positives = 84/96 (87%)
 Frame = +3

Query: 3    AAWLPYCVSVRLRYSFGEKPNISFLGMEGSHGGHACWQRLDDWDKCKQRVIQTVEMNGSS 182
            AAWLPYCVSVRLRYSFGE  N++FLGMEGSHGG ACW R+DDW+KCKQRVI+TVE+NGS+
Sbjct: 1648 AAWLPYCVSVRLRYSFGENTNVTFLGMEGSHGGRACWLRIDDWEKCKQRVIRTVEVNGST 1707

Query: 183  TGELNQGRLKIIADNVQRTLRACLEGLRDGSAISGS 290
            TG++ QGRL+++AD+VQRTL  CL+GLRDG     S
Sbjct: 1708 TGDVAQGRLRMVADSVQRTLHMCLQGLRDGGVTGSS 1743


>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/97 (70%), Positives = 85/97 (87%)
 Frame = +3

Query: 3    AAWLPYCVSVRLRYSFGEKPNISFLGMEGSHGGHACWQRLDDWDKCKQRVIQTVEMNGSS 182
            AAWLPYCVSVRLRYSFGE PN+SF+GM GSHGG ACW R+DDW+KCKQRV +TVE+NG+S
Sbjct: 1714 AAWLPYCVSVRLRYSFGESPNVSFIGMNGSHGGRACWLRVDDWEKCKQRVARTVEVNGNS 1773

Query: 183  TGELNQGRLKIIADNVQRTLRACLEGLRDGSAISGST 293
              +++QGRLK+IAD+VQR L  C++GLRDGS ++ S+
Sbjct: 1774 AADVSQGRLKLIADSVQRNLHMCIQGLRDGSGVTTSS 1810


>ref|XP_002882372.1| hypothetical protein ARALYDRAFT_477743 [Arabidopsis lyrata subsp.
            lyrata] gi|297328212|gb|EFH58631.1| hypothetical protein
            ARALYDRAFT_477743 [Arabidopsis lyrata subsp. lyrata]
          Length = 1702

 Score =  159 bits (401), Expect = 3e-37
 Identities = 67/92 (72%), Positives = 85/92 (92%)
 Frame = +3

Query: 3    AAWLPYCVSVRLRYSFGEKPNISFLGMEGSHGGHACWQRLDDWDKCKQRVIQTVEMNGSS 182
            AAWLPYCVSVRLRY+FGE P+++FLGMEGSHGG ACWQR+DDW+KCKQRV +TVE+NGS+
Sbjct: 1601 AAWLPYCVSVRLRYTFGESPSVTFLGMEGSHGGRACWQRVDDWEKCKQRVSRTVEVNGSA 1660

Query: 183  TGELNQGRLKIIADNVQRTLRACLEGLRDGSA 278
             G+L QG+LK++AD+VQRTL  CL+GLR+G++
Sbjct: 1661 AGDLTQGKLKLVADSVQRTLHLCLQGLREGNS 1692


>ref|NP_187125.1| RNA polymerase II transcription mediator [Arabidopsis thaliana]
            gi|75207288|sp|Q9SR02.1|MED14_ARATH RecName:
            Full=Mediator of RNA polymerase II transcription subunit
            14; AltName: Full=Protein STRUWWELPETER; Short=AtSWP
            gi|6175174|gb|AAF04900.1|AC011437_15 hypothetical protein
            [Arabidopsis thaliana]
            gi|20068999|gb|AAM09647.1|AF466359_1 SWP1 [Arabidopsis
            thaliana] gi|23898273|emb|CAD53582.1| struwwelpeter 1
            protein [Arabidopsis thaliana]
            gi|332640609|gb|AEE74130.1| RNA polymerase II
            transcription mediator [Arabidopsis thaliana]
          Length = 1703

 Score =  159 bits (401), Expect = 3e-37
 Identities = 68/97 (70%), Positives = 86/97 (88%)
 Frame = +3

Query: 3    AAWLPYCVSVRLRYSFGEKPNISFLGMEGSHGGHACWQRLDDWDKCKQRVIQTVEMNGSS 182
            AAWLPYCVSVRLRY+FGE P+++FLGMEGSHGG ACWQR+DDW+KCKQRV +TVE+NGS+
Sbjct: 1600 AAWLPYCVSVRLRYTFGENPSVTFLGMEGSHGGRACWQRVDDWEKCKQRVSRTVEVNGSA 1659

Query: 183  TGELNQGRLKIIADNVQRTLRACLEGLRDGSAISGST 293
             G+L QG+LK++AD+VQRTL  CL+GLR+G   + +T
Sbjct: 1660 AGDLTQGKLKLVADSVQRTLHLCLQGLREGGNNNNNT 1696


>ref|XP_004171233.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            14-like, partial [Cucumis sativus]
          Length = 1332

 Score =  158 bits (399), Expect = 5e-37
 Identities = 71/97 (73%), Positives = 86/97 (88%)
 Frame = +3

Query: 3    AAWLPYCVSVRLRYSFGEKPNISFLGMEGSHGGHACWQRLDDWDKCKQRVIQTVEMNGSS 182
            AAWLPYCVSV+LRYSFGE   +SFLGMEGSHGG ACW R+DDW+KCKQRV +TVE++GSS
Sbjct: 1232 AAWLPYCVSVKLRYSFGESLVVSFLGMEGSHGGRACWLRVDDWEKCKQRVARTVEVSGSS 1291

Query: 183  TGELNQGRLKIIADNVQRTLRACLEGLRDGSAISGST 293
            TG+++QGRL+I+ADNVQRTL  CL+GLR+GS I+  T
Sbjct: 1292 TGDVSQGRLRIVADNVQRTLHMCLQGLREGSEIATIT 1328