BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025373
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   112   1e-22
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   107   4e-21
ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arab...   104   4e-20
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...   102   2e-19
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  112 bits (281), Expect = 1e-22
 Identities = 91/288 (31%), Positives = 137/288 (47%), Gaps = 22/288 (7%)
 Frame = -3

Query: 801 LLCRLPVKPLFPRFRSFVSKPFCSVVDNASN-YVPKDEIFQKGENLIVRNFNKVENFYSV 625
           +LCRL  K L       VSK + +++D+ +  Y+  +   +   NL +    K    YS+
Sbjct: 12  ILCRLTAKKLL--CCRCVSKRWRTLIDSPTFIYLHLNHSIESPCNLSI--ILKSSELYSL 67

Query: 624 KVDSACDFTPVKLDNPVLSRTRYVNV---CKGLVCLWKPDDEGEDDLFLWNPTTRETKKL 454
             D   +  P  LD+P++     V +   C GL+C+        DD+ LWNP+ R  + +
Sbjct: 68  SFDLLDNIQP--LDHPLMCYNHGVKILGSCNGLLCICNI----VDDIALWNPSIRAHRVV 121

Query: 453 PRTDNMLVPCRLFGS-----SVIGFGYDNFSNDYKVMRTSDSQLAGI-------MVSVYN 310
           P     L   R FG      SV GFGYD  ++DYK++R +  Q  G+        V V++
Sbjct: 122 PYLPVELK--RYFGMCSCRVSVFGFGYDLSNDDYKLVRIA--QFGGVDRKSFESEVKVFS 177

Query: 309 LKNNLWTRADTISTSVSLYGSFGLFANGSLHWL------SRSNESIIAFDLGVLKHRKLP 148
           L+ N W R   +   V   G  G++ANG+LHWL      S   ++I+A DLGV  +  +P
Sbjct: 178 LRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVP 237

Query: 147 FPTGVRKKNGKALFAFNRCLGLIDHCPDSRTDMWVMNNNGVETSWSKL 4
            P  V       +     CL L+ +    R D+WVM    V+ SWSKL
Sbjct: 238 KPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKL 285


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  107 bits (267), Expect = 4e-21
 Identities = 93/291 (31%), Positives = 141/291 (48%), Gaps = 25/291 (8%)
 Frame = -3

Query: 801 LLCRLPVKPLFPRFRSFVSKPFCSVVDNASNYVPKD--EIFQKGENL--IVRNFNKVE-- 640
           +LCRLP K L    RS VSKP+C+++D   N+V            NL  I+R  + V   
Sbjct: 12  ILCRLPAKELLC-CRS-VSKPWCALIDGP-NFVKLHLKHSMDTSSNLYIILRTTSHVHYM 68

Query: 639 NFYSVKVDSACDFTPVKLDNPVLSRTRYVNVC---KGLVCLWKPDDEGEDDLFLWNPTTR 469
           +F    V + C  T  +L++P++     + V     GL+C+        DD+ +WNP+TR
Sbjct: 69  DFEQNLVLNDC-VTLKELNHPLMCYNHGIKVLGSVNGLLCI----SNVVDDIAVWNPSTR 123

Query: 468 ETKKLPRTDNMLVPCRLFGSS-----VIGFGYDNFSNDYKVMRTSDSQLAGIM-----VS 319
           + + +P     L   R FG+      V GFGYD+  +DYK++R +     G       V 
Sbjct: 124 KHRVVPFLPIELK--RYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVK 181

Query: 318 VYNLKNNLWTRADTISTSVSLYGSFGLFANGSLHWLSRSNES------IIAFDLGVLKHR 157
           VY+L+   W R   +   V   G+ G+FANG+LHW+   N        ++A DLGV  +R
Sbjct: 182 VYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYR 241

Query: 156 KLPFPTGVRKKNGKALFAFNRCLGLIDHCPDSRTDMWVMNNNGVETSWSKL 4
           ++  P    K     L     CL  + +    R D+W+M   GV+ SW+KL
Sbjct: 242 EVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKL 292


>ref|XP_002882458.1| hypothetical protein ARALYDRAFT_896735 [Arabidopsis lyrata subsp.
           lyrata] gi|297328298|gb|EFH58717.1| hypothetical protein
           ARALYDRAFT_896735 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  104 bits (259), Expect = 4e-20
 Identities = 94/312 (30%), Positives = 143/312 (45%), Gaps = 35/312 (11%)
 Frame = -3

Query: 834 LLIYYHINMNTLLCRLPVKPLFPRFRSFVSKPFCSVVDNASNYVPKDEIFQKGENLIVRN 655
           LL   H  +  +L RLP K +       VSK  CS+   +  +V           +IV  
Sbjct: 27  LLFLPHEIITEILLRLPTKSIGQC--RCVSKLLCSL-SPSPGFVKSHLERSNHRKMIVST 83

Query: 654 FNKVENFYSVKVD---SACD-----FTPVKLDNPV---------LSRTRY-------VNV 547
           +N     YSV VD     C+        V+L+ P+         + R  Y       V  
Sbjct: 84  YN----LYSVDVDWIGDGCEGSRESVAAVELNYPLKDDPSMMDQIGRHSYRRSWVVIVGS 139

Query: 546 CKGLVCLWKPDDEGEDDLFLWNPTTRETKKLPRTDNMLVPCRLFGSSVIGFGYDNFSNDY 367
             GLVCL       +  +FL+NPTT ++K+LP    +  P   F     GFG+D+ ++DY
Sbjct: 140 SNGLVCLSLGASYKKVPVFLFNPTTGDSKRLPEAP-VDTPVESFNFRSYGFGFDDHTHDY 198

Query: 366 KVMR---TSDSQLAGIMVSVYNLKNNLWTRADTISTSVS-LYGSFGLFANGSLHWLSRSN 199
           KV++   TS S    +  SVY+LK N W R   ++   S  + + G+  NG++HW+   +
Sbjct: 199 KVVKLVATSVSNQHILDASVYSLKANSWRRICILNYKGSNAFHTCGVHFNGAIHWVLTRH 258

Query: 198 ES---IIAFDLGVLKHRKLPFPTGVRK---KNGKALFA-FNRCLGLIDHCPDSRTDMWVM 40
           E    I+ FDL   + R++PFP        K G+ +    N  L +++HC     D+WVM
Sbjct: 259 EDHRVILVFDLTTEEFREMPFPDEAEDCSHKRGEFMVGCLNGRLCVVNHCNGQHDDIWVM 318

Query: 39  NNNGVETSWSKL 4
           N  G   SWS++
Sbjct: 319 NEYGEAKSWSRM 330


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score =  102 bits (253), Expect = 2e-19
 Identities = 86/297 (28%), Positives = 137/297 (46%), Gaps = 28/297 (9%)
 Frame = -3

Query: 810 MNTLLCRLPVKPLFPRFRSFVSKPFCSVVDNAS---NYVPKDEIFQKGENLIVRNFNKVE 640
           +  +L RLPV  L  RFRS +SK +C+ +D+ +    ++ K         LI    +  +
Sbjct: 10  LTEILTRLPVDCLL-RFRS-ISKSWCAKIDDPNFIKTHLKKSRETNSNLTLIFAGSHP-D 66

Query: 639 NFYSVKVDSACDFTPVKLDNPVLSRT------RYVNVCKGLVCLWKPDDEGEDDLFLWNP 478
            FY+V +DS      +KL+NP+   T      + V  C GL+C           + L NP
Sbjct: 67  YFYNVNLDSLNSI--IKLENPIKGPTDASHNIKIVGSCNGLLCFGNASGR----ITLMNP 120

Query: 477 TTRETKKLP--RTDNMLVPCRLFGSSVIGFGYDNFSNDYKVMRTSDS-----QLAGIMVS 319
           +TR+ K LP  R D  +    ++G+   GFG D+  +DYKV+R         Q       
Sbjct: 121 STRKHKVLPFLRMDASVKGKSVWGAWAFGFGCDSVHDDYKVIRLGQYLDFSLQQFETDTM 180

Query: 318 VYNLKNNLWTRADTISTSVSLYGSFGLFANGSLHWLSRSN------ESIIAFDLGVLKHR 157
           VY+LK+N W + D +S  +      G+    +LHWL+  +      + I+A +LGV   R
Sbjct: 181 VYSLKSNSWRKIDGMSCIIGFDQKMGVLVGEALHWLASRDRILLNPDVIVALNLGVEDFR 240

Query: 156 KLPFPTGV------RKKNGKALFAFNRCLGLIDHCPDSRTDMWVMNNNGVETSWSKL 4
           ++P P  V       +     L      L +     ++R D+WVM   G + SW++L
Sbjct: 241 EVPGPDVVVVGANPNQNPSLNLGVVEEWLSVFAIYNNTRLDIWVMKEYGAKDSWTRL 297


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  102 bits (253), Expect = 2e-19
 Identities = 91/303 (30%), Positives = 142/303 (46%), Gaps = 37/303 (12%)
 Frame = -3

Query: 801 LLCRLPVKPLFPRFRSFVSKPFCSVVDNA---SNYVPKDEIFQKGENLIVRNFNKVENFY 631
           +L RLPVK L  RFR  VSK +C  +D+    + ++ +        NLI+R+     N  
Sbjct: 11  ILSRLPVKSL-KRFRC-VSKSWCKEIDSPYFINTHLKRSSQAHTHLNLILRD---ATNLC 65

Query: 630 SVKVDSACDFTPVKL-DNPVLS---RTRYVNVCKGLVCLWKPDDEGEDDLFLWNPTTRET 463
           +V +DS  DFT ++L +NP+ S    T  +  C GL+ L   D      + L+NP+TRE 
Sbjct: 66  TVDLDSP-DFTSIELKNNPLKSDDCATEVMGSCNGLLALLNSDFS----IALYNPSTREK 120

Query: 462 KKLPRTDNMLVPCRLFGSSV------IGFGYDNFSNDYKVMR------TSDSQLAGIMVS 319
           K +P    + +P  L  S V       GFG+D  + DYKV+R       S        V 
Sbjct: 121 KMIP-VSPLELPNDLDDSKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVK 179

Query: 318 VYNLKNNLWTRADTISTSVSLY----------GSFGLFANGSLHWLS--------RSNES 193
           VY+LK+N W R D     +               +G+FAN ++HW +          ++ 
Sbjct: 180 VYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDL 239

Query: 192 IIAFDLGVLKHRKLPFPTGVRKKNGKALFAFNRCLGLIDHCPDSRTDMWVMNNNGVETSW 13
           I+AFDLG  + + +P P     ++   +     CL +  +    + ++WVM   GV+ SW
Sbjct: 240 IVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESW 299

Query: 12  SKL 4
           + L
Sbjct: 300 THL 302