BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025356
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK33630.1| unknown [Lotus japonicus]                              130   2e-28
ref|XP_003612457.1| Pentatricopeptide repeat-containing protein ...   127   2e-27
ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containi...   122   7e-26
ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containi...   122   7e-26
ref|NP_174459.1| pentatricopeptide repeat-containing protein [Ar...   116   3e-24

>gb|AFK33630.1| unknown [Lotus japonicus]
          Length = 356

 Score =  130 bits (327), Expect = 2e-28
 Identities = 76/186 (40%), Positives = 98/186 (52%)
 Frame = +2

Query: 80  KSKQLPQPNHTISDVLRLMDTLSISIPIDIYTSLLKECTQSKDIDQAILLHQHMVXXXXX 259
           K K+  +   T S +L LMD L   IPIDIYTSL+KECT S D   AI LH H+      
Sbjct: 3   KKKKRKRKGATTSHILHLMDVLPFPIPIDIYTSLIKECTLSPDPQTAIELHTHIAHSGIK 62

Query: 260 XXXXXXXXXXXXXXYCGCMSIARQLFDDMHSKDSNSWAAIIAGYMTSGEYSEVIDLFVEM 439
                          CG +  A QLFD M  KD NSWA +   Y  + +Y E ID+F+ M
Sbjct: 63  PPLSFINRILVMFVSCGLLDYACQLFDAMPVKDFNSWATLFIAYYDNADYEEAIDVFLAM 122

Query: 440 QRYKYGDNNAVWFPYSWILVCVIQACAATEDFELGRQIHGLLWKVDFEKNLFVCSSLIHF 619
             ++ G +    FP  WI  C ++ACA  E+  LG Q+HG L K+    ++ + SSLI F
Sbjct: 123 -LHQLGMSE---FP-PWICACFLKACACIENIPLGMQVHGWLLKLGTCDHVLLSSSLIRF 177

Query: 620 YGRNGC 637
           YGR  C
Sbjct: 178 YGRFTC 183


>ref|XP_003612457.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513792|gb|AES95415.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score =  127 bits (318), Expect = 2e-27
 Identities = 76/204 (37%), Positives = 102/204 (50%)
 Frame = +2

Query: 26  KKTSLKFSKKFHSPLEKPKSKQLPQPNHTISDVLRLMDTLSISIPIDIYTSLLKECTQSK 205
           K  +L        P+  PK  +  +   T S +L LMD L   I IDIYTSL+KECT S 
Sbjct: 45  KPKNLSLIHPSSQPITPPKKSKRRRKCDTTSHILPLMDALHFPITIDIYTSLVKECTLST 104

Query: 206 DIDQAILLHQHMVXXXXXXXXXXXXXXXXXXXYCGCMSIARQLFDDMHSKDSNSWAAIIA 385
           D + AI LH  ++                    CG +  AR++FD M  +D +SWA +  
Sbjct: 105 DPETAIELHTQIITRGIELPLTLLNRILIMFVSCGLLENARRVFDVMSVRDFHSWATLFV 164

Query: 386 GYMTSGEYSEVIDLFVEMQRYKYGDNNAVWFPYSWILVCVIQACAATEDFELGRQIHGLL 565
            Y  +GEY   ID+FV M      D     FP  WI  C+++ACA T +  LG Q+HG L
Sbjct: 165 SYYENGEYENAIDVFVSMLCQL--DVMGFSFP-PWIWSCLLKACACTMNVPLGMQVHGCL 221

Query: 566 WKVDFEKNLFVCSSLIHFYGRNGC 637
            K+    ++ + SSLI FYGR  C
Sbjct: 222 LKLGACDHVLISSSLIRFYGRFKC 245


>ref|XP_003631528.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Vitis vinifera]
          Length = 414

 Score =  122 bits (305), Expect = 7e-26
 Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 3/192 (1%)
 Frame = +2

Query: 71  EKPKSKQLPQPN-HTISDVLRLMDTLSISIPIDIYTSLLKECTQSKDIDQAILLHQHMVX 247
           EK KS     P   T +D+LRLMD L + IP DIY SL+KE + + D  QA  L  H+  
Sbjct: 46  EKKKSNSNATPTTSTPTDILRLMDGLGLPIPPDIYASLIKESSTTGDATQATQLLAHINR 105

Query: 248 XXXXXXXXXXXXXXXXXXYCGCMSIARQLFDDMH--SKDSNSWAAIIAGYMTSGEYSEVI 421
                              CG +  AR +FD M+  +K+S SWA ++A YM +G Y E I
Sbjct: 106 SGLPLSSALLNRILLMYVSCGLIHTARHMFDKMNVLNKNSISWAIMLAAYMDNGFYEEAI 165

Query: 422 DLFVEMQRYKYGDNNAVWFPYSWILVCVIQACAATEDFELGRQIHGLLWKVDFEKNLFVC 601
            LFV+M       +  +    +WI +CV++AC  T +  LG+Q+HG L KV +  NLF+ 
Sbjct: 166 FLFVQMMELH---STIMLELPAWIFICVLKACVHTMNLTLGKQVHGWLLKVGYATNLFLS 222

Query: 602 SSLIHFYGRNGC 637
             LI FYG+  C
Sbjct: 223 CYLISFYGKFRC 234


>ref|XP_003516509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31790-like [Glycine max]
          Length = 423

 Score =  122 bits (305), Expect = 7e-26
 Identities = 69/186 (37%), Positives = 97/186 (52%)
 Frame = +2

Query: 80  KSKQLPQPNHTISDVLRLMDTLSISIPIDIYTSLLKECTQSKDIDQAILLHQHMVXXXXX 259
           K K+  +   T SD+L LM+ L   +PIDIYTSL+KECT S D + AI L  H+      
Sbjct: 70  KKKKKKRKGATTSDILHLMEALPFPVPIDIYTSLIKECTVSGDPETAIELATHISKSGIK 129

Query: 260 XXXXXXXXXXXXXXYCGCMSIARQLFDDMHSKDSNSWAAIIAGYMTSGEYSEVIDLFVEM 439
                          CG +  AR +FD M  +D N+WA +   Y  + +Y E  ++FV M
Sbjct: 130 PPLPFLNRILVMFVSCGLLENARHMFDKMRVRDFNTWATLFVAYYDNTDYEEATNVFVNM 189

Query: 440 QRYKYGDNNAVWFPYSWILVCVIQACAATEDFELGRQIHGLLWKVDFEKNLFVCSSLIHF 619
                     + FP  WI  C+++ACA T +  LG Q+HG L K+    ++ + SSLI+F
Sbjct: 190 ----LTQLGMMEFP-PWIWACLLRACACTVNVPLGMQVHGWLLKLGTCDHVLLSSSLINF 244

Query: 620 YGRNGC 637
           YGR  C
Sbjct: 245 YGRFTC 250


>ref|NP_174459.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169166|sp|Q9C6R9.1|PPR66_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g31790 gi|12321298|gb|AAG50719.1|AC079041_12
           hypothetical protein [Arabidopsis thaliana]
           gi|111074348|gb|ABH04547.1| At1g31790 [Arabidopsis
           thaliana] gi|332193272|gb|AEE31393.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 409

 Score =  116 bits (291), Expect = 3e-24
 Identities = 70/185 (37%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
 Frame = +2

Query: 89  QLPQPNHTISDVLRLMDTLSISIPIDIYTSLLKECTQSKDIDQAILLHQHMVXXXXXXXX 268
           Q P    + SD+LRLMD+LS+    DIY+ L KE  +  D   A  L  H++        
Sbjct: 64  QNPSSRCSTSDILRLMDSLSLPGNEDIYSCLAKESARENDQRGAHELQVHIMKSSIRPTI 123

Query: 269 XXXXXXXXXXXYCGCMSIARQLFDDMHSKDSNSWAAIIAGYMTSGEYSEVIDLFVEMQRY 448
                       CG + I RQ+FD M  +D +SWA +  G +  G+Y +   LFV M   
Sbjct: 124 TFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSM--L 181

Query: 449 KYGDNNAVWFPYSWILVCVIQACAATEDFELGRQIHGLLWKVDF--EKNLFVCSSLIHFY 622
           K+    A   P SWIL CV++ACA   DFELG+Q+H L  K+ F  E++ ++  SLI FY
Sbjct: 182 KHSQKGAFKIP-SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY 240

Query: 623 GRNGC 637
           G   C
Sbjct: 241 GEFRC 245