BLASTX nr result
ID: Cnidium21_contig00025348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00025348
(761 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-contai... 175 2e-71
ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing p... 171 4e-70
ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arab... 169 8e-70
ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-contai... 172 2e-69
ref|XP_002517064.1| coated vesicle membrane protein, putative [R... 163 7e-69
>ref|XP_002283487.1| PREDICTED: transmembrane emp24 domain-containing protein A [Vitis
vinifera] gi|297737114|emb|CBI26315.3| unnamed protein
product [Vitis vinifera]
Length = 215
Score = 175 bits (443), Expect(2) = 2e-71
Identities = 85/94 (90%), Positives = 90/94 (95%)
Frame = +2
Query: 293 HVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQRYLRARDARHRHTNESTRKRVI 472
HVGHIPNEH+LAKDEHLDPINVKIAELREALESVTAEQ+YL+ARD RHRHTNESTRKRVI
Sbjct: 122 HVGHIPNEHNLAKDEHLDPINVKIAELREALESVTAEQKYLKARDTRHRHTNESTRKRVI 181
Query: 473 FYTVGEYILLALASGLQVAYIRRLFSNSVVYNRV 574
FYT+GEY+LLALASGLQV YIRRLFS SV YNRV
Sbjct: 182 FYTLGEYLLLALASGLQVVYIRRLFSKSVAYNRV 215
Score = 120 bits (302), Expect(2) = 2e-71
Identities = 53/62 (85%), Positives = 55/62 (88%)
Frame = +3
Query: 3 TGNFVVADHDIFWSSDHPGIDLVVTSPGGNIVHTLKGTSGDKFEFKAPRSGMYKFCFHNS 182
+GNFVV DHDIFW SDHPGID VTSP GN VHTLKGTSGDKFEFKAPRSGMYKFCF NS
Sbjct: 51 SGNFVVVDHDIFWGSDHPGIDFTVTSPAGNTVHTLKGTSGDKFEFKAPRSGMYKFCFQNS 110
Query: 183 YS 188
Y+
Sbjct: 111 YA 112
>ref|NP_188924.3| emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis
thaliana] gi|75273406|sp|Q9LIL4.1|P24B3_ARATH RecName:
Full=Transmembrane emp24 domain-containing protein
p24beta3; AltName: Full=p24 family protein beta2;
Short=p24beta2; AltName: Full=p24 family protein beta3;
Short=p24beta3; Flags: Precursor
gi|11994713|dbj|BAB03029.1| coated vesicle membrane
protein-like [Arabidopsis thaliana]
gi|17979492|gb|AAL50082.1| AT3g22845/MWI23_22
[Arabidopsis thaliana] gi|20147305|gb|AAM10366.1|
AT3g22845/MWI23_22 [Arabidopsis thaliana]
gi|332643162|gb|AEE76683.1| emp24/gp25L/p24 family/GOLD
domain-containing protein [Arabidopsis thaliana]
Length = 214
Score = 171 bits (434), Expect(2) = 4e-70
Identities = 83/94 (88%), Positives = 87/94 (92%)
Frame = +2
Query: 293 HVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQRYLRARDARHRHTNESTRKRVI 472
HVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQ+YL+ARD RHRHTNESTRKRVI
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180
Query: 473 FYTVGEYILLALASGLQVAYIRRLFSNSVVYNRV 574
FYTVGEYI LA ASGLQV YIR+LFS SV YNRV
Sbjct: 181 FYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214
Score = 120 bits (300), Expect(2) = 4e-70
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = +3
Query: 3 TGNFVVADHDIFWSSDHPGIDLVVTSPGGNIVHTLKGTSGDKFEFKAPRSGMYKFCFHNS 182
+GNFVV DHDIFW SDHPG+D VTSP GNIV TLKGTSGDKFEFKAP+SGMYKFCFHN
Sbjct: 50 SGNFVVVDHDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPKSGMYKFCFHNP 109
Query: 183 YS 188
YS
Sbjct: 110 YS 111
>ref|XP_002883380.1| hypothetical protein ARALYDRAFT_479795 [Arabidopsis lyrata subsp.
lyrata] gi|297329220|gb|EFH59639.1| hypothetical protein
ARALYDRAFT_479795 [Arabidopsis lyrata subsp. lyrata]
Length = 214
Score = 169 bits (428), Expect(2) = 8e-70
Identities = 82/94 (87%), Positives = 86/94 (91%)
Frame = +2
Query: 293 HVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQRYLRARDARHRHTNESTRKRVI 472
HVGHIPNEHDLAKDEHLDP+NVKIAELREALESV AEQ+YL+ARD RHRHTNESTRKRVI
Sbjct: 121 HVGHIPNEHDLAKDEHLDPVNVKIAELREALESVVAEQKYLKARDTRHRHTNESTRKRVI 180
Query: 473 FYTVGEYILLALASGLQVAYIRRLFSNSVVYNRV 574
YTVGEYI LA ASGLQV YIR+LFS SV YNRV
Sbjct: 181 LYTVGEYIFLAAASGLQVLYIRKLFSKSVAYNRV 214
Score = 121 bits (303), Expect(2) = 8e-70
Identities = 53/62 (85%), Positives = 55/62 (88%)
Frame = +3
Query: 3 TGNFVVADHDIFWSSDHPGIDLVVTSPGGNIVHTLKGTSGDKFEFKAPRSGMYKFCFHNS 182
+GNFVV DHDIFW SDHPG+D VTSP GNIV TLKGTSGDKFEFKAPRSGMYKFCFHN
Sbjct: 50 SGNFVVVDHDIFWGSDHPGLDFTVTSPAGNIVQTLKGTSGDKFEFKAPRSGMYKFCFHNP 109
Query: 183 YS 188
YS
Sbjct: 110 YS 111
>ref|XP_004134119.1| PREDICTED: transmembrane emp24 domain-containing protein
p24beta3-like [Cucumis sativus]
gi|449504149|ref|XP_004162266.1| PREDICTED:
transmembrane emp24 domain-containing protein
p24beta3-like [Cucumis sativus]
Length = 215
Score = 172 bits (435), Expect(2) = 2e-69
Identities = 84/94 (89%), Positives = 89/94 (94%)
Frame = +2
Query: 293 HVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQRYLRARDARHRHTNESTRKRVI 472
HVGHIPNEHD AKDEHLDPINVKIAELREALESV +EQ+YL+ARDARHRHTNESTRKRVI
Sbjct: 122 HVGHIPNEHDHAKDEHLDPINVKIAELREALESVISEQKYLKARDARHRHTNESTRKRVI 181
Query: 473 FYTVGEYILLALASGLQVAYIRRLFSNSVVYNRV 574
FYTVGEY+LLA+ASGLQV YIRRLFS SV YNRV
Sbjct: 182 FYTVGEYLLLAVASGLQVIYIRRLFSKSVAYNRV 215
Score = 117 bits (293), Expect(2) = 2e-69
Identities = 50/62 (80%), Positives = 55/62 (88%)
Frame = +3
Query: 3 TGNFVVADHDIFWSSDHPGIDLVVTSPGGNIVHTLKGTSGDKFEFKAPRSGMYKFCFHNS 182
+GNFVV DHDIFW +DHPGI+ VTSP GN+VH+LK TSGDKFEFKAPRSGMYKFCFHN
Sbjct: 51 SGNFVVVDHDIFWGADHPGIEFTVTSPAGNVVHSLKETSGDKFEFKAPRSGMYKFCFHNP 110
Query: 183 YS 188
YS
Sbjct: 111 YS 112
>ref|XP_002517064.1| coated vesicle membrane protein, putative [Ricinus communis]
gi|223543699|gb|EEF45227.1| coated vesicle membrane
protein, putative [Ricinus communis]
Length = 210
Score = 163 bits (413), Expect(2) = 7e-69
Identities = 82/94 (87%), Positives = 85/94 (90%)
Frame = +2
Query: 293 HVGHIPNEHDLAKDEHLDPINVKIAELREALESVTAEQRYLRARDARHRHTNESTRKRVI 472
HVGHIPN HDLAKDEHL+PINVKIAELREALESVTAEQ+YL+ARDARHR TNESTRKRVI
Sbjct: 117 HVGHIPNAHDLAKDEHLNPINVKIAELREALESVTAEQKYLKARDARHRRTNESTRKRVI 176
Query: 473 FYTVGEYILLALASGLQVAYIRRLFSNSVVYNRV 574
YTVGEYILL L S LQV YIRRLFS SV YNRV
Sbjct: 177 GYTVGEYILLGLVSTLQVVYIRRLFSKSVAYNRV 210
Score = 124 bits (310), Expect(2) = 7e-69
Identities = 54/62 (87%), Positives = 57/62 (91%)
Frame = +3
Query: 3 TGNFVVADHDIFWSSDHPGIDLVVTSPGGNIVHTLKGTSGDKFEFKAPRSGMYKFCFHNS 182
+GNFVV DHDIFWSSDHPGIDL VTSP N+VHT+KGTSGDKFEFKAPRSGMYKFCFHN
Sbjct: 46 SGNFVVVDHDIFWSSDHPGIDLTVTSPADNVVHTVKGTSGDKFEFKAPRSGMYKFCFHNP 105
Query: 183 YS 188
YS
Sbjct: 106 YS 107