BLASTX nr result

ID: Cnidium21_contig00025342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025342
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22168.3| unnamed protein product [Vitis vinifera]              343   3e-92
ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ...   343   3e-92
ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ...   337   2e-90
ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   335   9e-90
ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, ...   335   9e-90

>emb|CBI22168.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  343 bits (880), Expect = 3e-92
 Identities = 172/207 (83%), Positives = 186/207 (89%)
 Frame = +2

Query: 2   SNPKNKITTCWEPTVLATIIIPSEYVGPVITLCSDRRGEQLEYTFIDSLRIFLKYRLPLR 181
           SNP  ++T CWEPTV+ATIIIPSEYVGPVITLCS+RRGEQLEY+FIDS R F+KYRLPLR
Sbjct: 310 SNPGKRVTACWEPTVIATIIIPSEYVGPVITLCSERRGEQLEYSFIDSQRAFMKYRLPLR 369

Query: 182 EIVVDFYNELKSITSGYASFDYEEAEYMAADLVKLDILLNGQPVDAMATIVHRLKAQRVG 361
           EIVVDFYNELKSITSGYASFDYE+AEY A+DLVKLDILLNGQPVDAMATIVH LKAQRVG
Sbjct: 370 EIVVDFYNELKSITSGYASFDYEDAEYQASDLVKLDILLNGQPVDAMATIVHNLKAQRVG 429

Query: 362 RELVEKLKKFIDRQMFEINIQAAIGSKVIARETVSAMRKNVLAKCYGGDITRXXXXXXXX 541
           RELVEKLKKFIDRQMFEI IQAAIGSK+IARET+SAMRKNVLAKCYGGD+TR        
Sbjct: 430 RELVEKLKKFIDRQMFEIVIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQ 489

Query: 542 XXXXXRMKRVGTVDIPQEAFNELLRVS 622
                RMKRVG+VDIPQEAF+ELL+VS
Sbjct: 490 KEGKKRMKRVGSVDIPQEAFHELLKVS 516


>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
            vinifera]
          Length = 681

 Score =  343 bits (880), Expect = 3e-92
 Identities = 172/207 (83%), Positives = 186/207 (89%)
 Frame = +2

Query: 2    SNPKNKITTCWEPTVLATIIIPSEYVGPVITLCSDRRGEQLEYTFIDSLRIFLKYRLPLR 181
            SNP  ++T CWEPTV+ATIIIPSEYVGPVITLCS+RRGEQLEY+FIDS R F+KYRLPLR
Sbjct: 475  SNPGKRVTACWEPTVIATIIIPSEYVGPVITLCSERRGEQLEYSFIDSQRAFMKYRLPLR 534

Query: 182  EIVVDFYNELKSITSGYASFDYEEAEYMAADLVKLDILLNGQPVDAMATIVHRLKAQRVG 361
            EIVVDFYNELKSITSGYASFDYE+AEY A+DLVKLDILLNGQPVDAMATIVH LKAQRVG
Sbjct: 535  EIVVDFYNELKSITSGYASFDYEDAEYQASDLVKLDILLNGQPVDAMATIVHNLKAQRVG 594

Query: 362  RELVEKLKKFIDRQMFEINIQAAIGSKVIARETVSAMRKNVLAKCYGGDITRXXXXXXXX 541
            RELVEKLKKFIDRQMFEI IQAAIGSK+IARET+SAMRKNVLAKCYGGD+TR        
Sbjct: 595  RELVEKLKKFIDRQMFEIVIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQ 654

Query: 542  XXXXXRMKRVGTVDIPQEAFNELLRVS 622
                 RMKRVG+VDIPQEAF+ELL+VS
Sbjct: 655  KEGKKRMKRVGSVDIPQEAFHELLKVS 681


>ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis]
            gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName:
            Full=Translation factor GUF1 homolog, mitochondrial;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|223543494|gb|EEF45025.1| GTP-binding protein lepA,
            putative [Ricinus communis]
          Length = 673

 Score =  337 bits (864), Expect = 2e-90
 Identities = 168/207 (81%), Positives = 185/207 (89%)
 Frame = +2

Query: 2    SNPKNKITTCWEPTVLATIIIPSEYVGPVITLCSDRRGEQLEYTFIDSLRIFLKYRLPLR 181
            SNPK ++T  WEPTV+ATIIIPSEYVGPVITLCS+RRG+QLEY+FIDS R F+KYRLPLR
Sbjct: 467  SNPKKRVTASWEPTVVATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRLPLR 526

Query: 182  EIVVDFYNELKSITSGYASFDYEEAEYMAADLVKLDILLNGQPVDAMATIVHRLKAQRVG 361
            EIVVDFYNELKSITSGYASFDYE++EY  A+LVKLDILLNGQPVDAMATIVH LKAQRVG
Sbjct: 527  EIVVDFYNELKSITSGYASFDYEDSEYQEAELVKLDILLNGQPVDAMATIVHNLKAQRVG 586

Query: 362  RELVEKLKKFIDRQMFEINIQAAIGSKVIARETVSAMRKNVLAKCYGGDITRXXXXXXXX 541
            RELV+KLKKFIDRQMFEI IQAAIGSKV+ARET+SAMRKNVLAKCYGGD+TR        
Sbjct: 587  RELVDKLKKFIDRQMFEITIQAAIGSKVVARETISAMRKNVLAKCYGGDVTRKRKLLEKQ 646

Query: 542  XXXXXRMKRVGTVDIPQEAFNELLRVS 622
                 RMKRVG+VDIPQEAF+ELL+VS
Sbjct: 647  KEGKKRMKRVGSVDIPQEAFHELLKVS 673


>ref|XP_004162590.1| PREDICTED: LOW QUALITY PROTEIN: translation factor GUF1 homolog,
            mitochondrial-like [Cucumis sativus]
          Length = 766

 Score =  335 bits (859), Expect = 9e-90
 Identities = 169/207 (81%), Positives = 185/207 (89%)
 Frame = +2

Query: 2    SNPKNKITTCWEPTVLATIIIPSEYVGPVITLCSDRRGEQLEYTFIDSLRIFLKYRLPLR 181
            SNPK ++   WEPTVLATIIIPSEYVG VITLCS+RRG+QLEY+FIDS R F+KYRLPLR
Sbjct: 560  SNPKKRVIAGWEPTVLATIIIPSEYVGAVITLCSERRGQQLEYSFIDSQRAFMKYRLPLR 619

Query: 182  EIVVDFYNELKSITSGYASFDYEEAEYMAADLVKLDILLNGQPVDAMATIVHRLKAQRVG 361
            EIVVDFYNELKSITSGYASFDYE++EY  ADLVKLDILLNGQPVDAMATIVH LKAQRVG
Sbjct: 620  EIVVDFYNELKSITSGYASFDYEDSEYQEADLVKLDILLNGQPVDAMATIVHNLKAQRVG 679

Query: 362  RELVEKLKKFIDRQMFEINIQAAIGSKVIARETVSAMRKNVLAKCYGGDITRXXXXXXXX 541
            RELV+KLKKFIDRQMFEI+IQAAIGSK+IARET+SAMRKNVLAKCYGGD+TR        
Sbjct: 680  RELVDKLKKFIDRQMFEISIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQ 739

Query: 542  XXXXXRMKRVGTVDIPQEAFNELLRVS 622
                 RMKRVG+VDIPQEAFNE+L+VS
Sbjct: 740  KEGXKRMKRVGSVDIPQEAFNEILKVS 766


>ref|XP_004148706.1| PREDICTED: translation factor GUF1 homolog, mitochondrial-like
            [Cucumis sativus]
          Length = 766

 Score =  335 bits (859), Expect = 9e-90
 Identities = 168/207 (81%), Positives = 184/207 (88%)
 Frame = +2

Query: 2    SNPKNKITTCWEPTVLATIIIPSEYVGPVITLCSDRRGEQLEYTFIDSLRIFLKYRLPLR 181
            SNPK ++   WEPTVLATIIIPSEYVG VITLCS+RRG+QLEY+FIDS R F+KYRLPLR
Sbjct: 560  SNPKKRVIAGWEPTVLATIIIPSEYVGAVITLCSERRGQQLEYSFIDSQRAFMKYRLPLR 619

Query: 182  EIVVDFYNELKSITSGYASFDYEEAEYMAADLVKLDILLNGQPVDAMATIVHRLKAQRVG 361
            EIVVDFYNELKSITSGYASFDYE++EY  ADLVKLDILLNGQPVDAMATIVH LKAQRVG
Sbjct: 620  EIVVDFYNELKSITSGYASFDYEDSEYQEADLVKLDILLNGQPVDAMATIVHNLKAQRVG 679

Query: 362  RELVEKLKKFIDRQMFEINIQAAIGSKVIARETVSAMRKNVLAKCYGGDITRXXXXXXXX 541
            RELV+KLKKFIDRQMFEI+IQAAIGSK+IARET+SAMRKNVLAKCYGGD+TR        
Sbjct: 680  RELVDKLKKFIDRQMFEISIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQ 739

Query: 542  XXXXXRMKRVGTVDIPQEAFNELLRVS 622
                 RMKRVG+VDIPQEAFNE+L+VS
Sbjct: 740  KEGKKRMKRVGSVDIPQEAFNEILKVS 766


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