BLASTX nr result

ID: Cnidium21_contig00025321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025321
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vi...   211   6e-53
emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]   211   6e-53
ref|XP_002300588.1| actin related protein [Populus trichocarpa] ...   209   2e-52
ref|XP_003598309.1| Actin related protein [Medicago truncatula] ...   202   2e-50
ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cuc...   202   3e-50

>ref|XP_002264128.1| PREDICTED: actin-related protein 8 [Vitis vinifera]
           gi|296090034|emb|CBI39853.3| unnamed protein product
           [Vitis vinifera]
          Length = 473

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/149 (67%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
 Frame = -2

Query: 443 SFTGAFDRIPVDIFIQILKLLGPKETAKLSVVCKYWNSIVSHNRLWIYFLQNNTEQP--W 270
           S TGAF  IP D+F+ IL+ L P+E AKLS+VCKYW  +VS N+LW+Y LQ    QP  W
Sbjct: 31  SSTGAFSHIPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSW 90

Query: 269 DSVFFAENYLRAGYHHLLTLPRQMPELSFMHIYGQRARVPGAIIIDGGSGYCKYGWSKYD 90
           DS+ FAE +L+ GY  LLT   QMP+LSFMHI+G+RA+ PGAIIIDGGSGYCKYGWSKYD
Sbjct: 91  DSLVFAETHLQMGYP-LLTFNDQMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYD 149

Query: 89  SPSGRSATFLEFGNIESPLYSRLRHFYAT 3
           + +G SATFLEFGNIE+P+YSRLRHF AT
Sbjct: 150 TTTGMSATFLEFGNIETPIYSRLRHFLAT 178


>emb|CAN62263.1| hypothetical protein VITISV_013986 [Vitis vinifera]
          Length = 451

 Score =  211 bits (536), Expect = 6e-53
 Identities = 100/149 (67%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
 Frame = -2

Query: 443 SFTGAFDRIPVDIFIQILKLLGPKETAKLSVVCKYWNSIVSHNRLWIYFLQNNTEQP--W 270
           S TGAF  IP D+F+ IL+ L P+E AKLS+VCKYW  +VS N+LW+Y LQ    QP  W
Sbjct: 31  SSTGAFSHIPFDVFMHILQFLEPREVAKLSLVCKYWKFLVSDNQLWLYLLQKEQNQPGSW 90

Query: 269 DSVFFAENYLRAGYHHLLTLPRQMPELSFMHIYGQRARVPGAIIIDGGSGYCKYGWSKYD 90
           DS+ FAE +L+ GY  LLT   QMP+LSFMHI+G+RA+ PGAIIIDGGSGYCKYGWSKYD
Sbjct: 91  DSLVFAETHLQMGYP-LLTFNDQMPQLSFMHIFGRRAKAPGAIIIDGGSGYCKYGWSKYD 149

Query: 89  SPSGRSATFLEFGNIESPLYSRLRHFYAT 3
           + +G SATFLEFGNIE+P+YSRLRHF AT
Sbjct: 150 TTTGMSATFLEFGNIETPIYSRLRHFLAT 178


>ref|XP_002300588.1| actin related protein [Populus trichocarpa]
           gi|222847846|gb|EEE85393.1| actin related protein
           [Populus trichocarpa]
          Length = 473

 Score =  209 bits (531), Expect = 2e-52
 Identities = 98/148 (66%), Positives = 121/148 (81%)
 Frame = -2

Query: 446 TSFTGAFDRIPVDIFIQILKLLGPKETAKLSVVCKYWNSIVSHNRLWIYFLQNNTEQPWD 267
           +S  GAFDR+P+D+ +QI++L+GPK+ A+LSVVCK W  +VS NRLWIYFLQN  +  WD
Sbjct: 37  SSSLGAFDRLPIDVVLQIVRLVGPKDAARLSVVCKSWRPLVSDNRLWIYFLQNYHDT-WD 95

Query: 266 SVFFAENYLRAGYHHLLTLPRQMPELSFMHIYGQRARVPGAIIIDGGSGYCKYGWSKYDS 87
           SVFF E +LR+GY  + T    + ELSFM IYGQR +VPGA+I+DGGSG+CKYGWSK   
Sbjct: 96  SVFFVETHLRSGYP-IQTFSSPITELSFMRIYGQRVQVPGAVIVDGGSGHCKYGWSKNAC 154

Query: 86  PSGRSATFLEFGNIESPLYSRLRHFYAT 3
           PSGRSATFLEFGNIESP+YSRL+HF+AT
Sbjct: 155 PSGRSATFLEFGNIESPMYSRLQHFFAT 182


>ref|XP_003598309.1| Actin related protein [Medicago truncatula]
           gi|355487357|gb|AES68560.1| Actin related protein
           [Medicago truncatula]
          Length = 471

 Score =  202 bits (515), Expect = 2e-50
 Identities = 102/147 (69%), Positives = 116/147 (78%), Gaps = 3/147 (2%)
 Frame = -2

Query: 434 GAFDRIPVDIFIQILKLLGPKETAKLSVVCKYWNSIVSHNRLWIYFLQNNTEQP-WDSVF 258
           G  D++P DI IQIL+LLGPKE AKLSV+CK     VS NRLW++FLQ +   P WDSVF
Sbjct: 37  GELDQLPSDILIQILRLLGPKEVAKLSVICKSLKFSVSDNRLWLHFLQTHQSDPSWDSVF 96

Query: 257 FAENYLRAGYHHLLTLPR--QMPELSFMHIYGQRARVPGAIIIDGGSGYCKYGWSKYDSP 84
           FAE  L +GY     LP   Q P+LSF HIYGQRA+VPGAIIIDGGSGYCK+GWSKY  P
Sbjct: 97  FAETNLISGY----PLPSFGQRPQLSFKHIYGQRAQVPGAIIIDGGSGYCKFGWSKYACP 152

Query: 83  SGRSATFLEFGNIESPLYSRLRHFYAT 3
           SGRSATFLEFGNIESP+Y+RLRHF+AT
Sbjct: 153 SGRSATFLEFGNIESPMYTRLRHFFAT 179


>ref|XP_004149570.1| PREDICTED: actin-related protein 8-like [Cucumis sativus]
          Length = 466

 Score =  202 bits (513), Expect = 3e-50
 Identities = 100/148 (67%), Positives = 116/148 (78%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443 SFTGAFDRIPVDIFIQILKLLGPKETAKLSVVCKYWNSIVSH-NRLWIYFLQNNTEQPWD 267
           S  G FDRIPV+I +QIL+L GPK TAK+ ++CK W S+VS  N LWI+FLQN  E PWD
Sbjct: 30  SSLGDFDRIPVEILMQILQLAGPKTTAKMGMLCKSWRSLVSSDNTLWIFFLQNQLE-PWD 88

Query: 266 SVFFAENYLRAGYHHLLTLPRQMPELSFMHIYGQRARVPGAIIIDGGSGYCKYGWSKYDS 87
           SV F E  L +GY  L T   QM  LSFM +Y +RA VPG++IIDGGSGYCK+GWSKYD 
Sbjct: 89  SVLFGETKLASGYP-LETFSGQMMPLSFMKVYNKRAEVPGSVIIDGGSGYCKFGWSKYDG 147

Query: 86  PSGRSATFLEFGNIESPLYSRLRHFYAT 3
           PSGRSATFLEFGNIESP+YSRLRHF+AT
Sbjct: 148 PSGRSATFLEFGNIESPMYSRLRHFFAT 175


Top