BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025306
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   201   2e-49
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   191   2e-46
ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   181   2e-43
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...   162   1e-37
ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|35548...   160   5e-37

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  201 bits (510), Expect = 2e-49
 Identities = 109/250 (43%), Positives = 157/250 (62%), Gaps = 8/250 (3%)
 Frame = -2

Query: 776 DLVLMNPATRKHKLLPVSPIEYPVYYSKTKCEFVSYGFGHDSVRDDYKVVRIAQF----P 609
           D+ + NP+TRKH+++P  PIE   Y+    C    +GFG+DSVRDDYK+VRIAQF     
Sbjct: 114 DIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGK 173

Query: 608 DLVKNEVKVFSLKKNVWRRVQDFPY-VLYATAHGVFLDGVLHWLVTKRSGSE-AVVIASF 435
              ++EVKV+SL+K  WRR+ D PY V Y  A+GVF +G LHW+V +   S  A ++ + 
Sbjct: 174 RSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVAL 233

Query: 434 DLGTEKYGSLPQPRYSDMSDFMATLRVVGGKLCLSCNYEMRYIDFWVMEKYGVKKSWSKI 255
           DLG E Y  + QP Y D  +F   L V+ G LC   N+    +D W+M++YGVK+SW+K+
Sbjct: 234 DLGVEDYREVLQPEYKD-KNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKL 292

Query: 254 LSVEQNVGIRFMQ-LKALAYSNSGKEVLLQQEAGRILWYDLELNEISKRFV-IPNFWKAH 81
            SV Q   I F++ LK LAYS SG EVL++ +   + WYDL+  ++  R   IP  ++A 
Sbjct: 293 FSVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKNRIPGIPYSFEAD 352

Query: 80  VSLESLVKLN 51
             +ESL+ ++
Sbjct: 353 TFVESLISVS 362


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  191 bits (485), Expect = 2e-46
 Identities = 114/288 (39%), Positives = 164/288 (56%), Gaps = 10/288 (3%)
 Frame = -2

Query: 884 GAHFLASCNGLILLLTAKSLGSCVFETLSQPDPPNLDLVLMNPATRKHKLLPVSPIEYPV 705
           G   L SCNGL+          C+   +        D+ L NP+ R H+++P  P+E   
Sbjct: 88  GVKILGSCNGLL----------CICNIVD-------DIALWNPSIRAHRVVPYLPVELKR 130

Query: 704 YYSKTKCEFVSYGFGHDSVRDDYKVVRIAQFPDL----VKNEVKVFSLKKNVWRRVQDFP 537
           Y+    C    +GFG+D   DDYK+VRIAQF  +     ++EVKVFSL+KN WRR+ D P
Sbjct: 131 YFGMCSCRVSVFGFGYDLSNDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMP 190

Query: 536 Y-VLYATAHGVFLDGVLHWLVTKRSGSE-AVVIASFDLGTEKYGSLPQPRYSDMSDFMAT 363
           Y VLY   +G++ +G LHWLV++   S  A  I + DLG E Y  +P+P + DM+  M  
Sbjct: 191 YCVLYPGENGIYANGALHWLVSQDPDSTVADTIVALDLGVEDYHVVPKPEFVDMNCNMG- 249

Query: 362 LRVVGGKLCLSCNYEMRYIDFWVMEKYGVKKSWSKILSVE--QNVGIRFMQLKALAYSNS 189
           + V+ G L L        +D WVME+Y VK+SWSK+ SV   + +GI    LK LAYS S
Sbjct: 250 VGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLFSVARLEVIGI-LRSLKPLAYSKS 308

Query: 188 GKEVLLQQEAGRILWYDLELNEISKRFV--IPNFWKAHVSLESLVKLN 51
           G EVL++ +   + WYDL+  E+   ++  +P  ++A + + SLV LN
Sbjct: 309 GNEVLIEHDNVNLFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVPLN 356


>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  181 bits (459), Expect = 2e-43
 Identities = 115/321 (35%), Positives = 174/321 (54%), Gaps = 31/321 (9%)
 Frame = -2

Query: 872 LASCNGLILLLTAKSLGSCVFETLSQPDPPNLDLVLMNPATRKHKLLPVSPIEYP--VYY 699
           + SCNGL+ LL +                 +  + L NP+TR+ K++PVSP+E P  +  
Sbjct: 94  MGSCNGLLALLNS-----------------DFSIALYNPSTREKKMIPVSPLELPNDLDD 136

Query: 698 SKTKCEFVSYGFGHDSVRDDYKVVRIAQF----PD-LVKNEVKVFSLKKNVWRRVQDFPY 534
           SK    F  YGFGHD + +DYKVVR   F    PD     EVKV+SLK N W+R+ D+PY
Sbjct: 137 SKVSSLFNFYGFGHDPINEDYKVVRFIHFYGDSPDGFFHCEVKVYSLKSNSWKRIDDYPY 196

Query: 533 VLY-----------ATAHGVFLDGVLHWLVT-----KRSGSEAVVIASFDLGTEKYGSLP 402
            L               +GVF +  +HW  T     K +GS+ +V  +FDLG E++  +P
Sbjct: 197 DLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGKENGSDLIV--AFDLGAEEFKIIP 254

Query: 401 QPRYSDMSDFMATLRVVGGKLCLSCNYEMRYIDFWVMEKYGVKKSWSKILSVEQNVGIR- 225
           QP YS     M  + V+GG LC+ CN   + ++ WVM++YGVK+SW+ + +V   + ++ 
Sbjct: 255 QPDYSSNEHEM-NVGVLGGCLCVFCNKNCKQVEIWVMKEYGVKESWTHLCTVIAQLQVKA 313

Query: 224 -FMQLKALAYSNSGKEVLLQQEAGRILWYDL--ELNEISKRFVIPNFWKAHVSLESLVKL 54
            ++  + LAYS  G ++LL+ +    +WYDL    ++I +    P  + A + + SLV L
Sbjct: 314 FWLHARPLAYSKGGDKILLELDNRFFVWYDLRRRKSKIIRIRGAPPIFIAEICVGSLVTL 373

Query: 53  NCGDSTELA----QVKRKTKK 3
           N G   + +    Q KRKT+K
Sbjct: 374 NGGGEGQTSGKDTQEKRKTRK 394


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  162 bits (409), Expect = 1e-37
 Identities = 116/321 (36%), Positives = 168/321 (52%), Gaps = 29/321 (9%)
 Frame = -2

Query: 884 GAHFLASCNGLILLLTAKSLGSCVFETLSQPDPPNLDLVLMNPATRKHKLLPVSPIEYPV 705
           G   + SCNGL+ L  ++                  DL L NPATRK+K +PVS IE P 
Sbjct: 92  GTEAVGSCNGLLALRNSER-----------------DLALYNPATRKYKRVPVSEIEPPD 134

Query: 704 YYSKTKCEFVSYGFGHDSVRDDYKVVRIAQF---PDLVKN-----EVKVFSLKKNVWRRV 549
             SKT   +V YGFG DSV +DY+++R+A F    D  ++     +V+V+SLK + W+R+
Sbjct: 135 RNSKTG--YVFYGFGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRI 192

Query: 548 QDFPY-----------VLYATAHGVFLDGVLHWLVTK--RSGSEAVVIASFDLGTEKYGS 408
           +  PY           VL+   +GVF    LHW++      G    +IA FD+  E +  
Sbjct: 193 KGLPYYLRFLYKPFFQVLHRRGYGVFACNALHWVMPHWPELGVNNSIIA-FDIVNETFQQ 251

Query: 407 LPQPRYSDMS-DFMATLRVVGGKLCLSCNYEMRYIDFWVMEKYGVKKSWSKILSVEQNVG 231
           +PQP +SD   +F     V+ G+LC  CN     ID WVME+YGVK+SW K+ S   +  
Sbjct: 252 VPQPNWSDNQLNFQVDAGVLEGRLCAMCNCGHECIDLWVMEEYGVKESWIKLFSFRLSKS 311

Query: 230 I-RFMQLKALAYSNSGKEVLLQQEAGRILWYDLELNEISKRFVI----PNFWKAHVSLES 66
           +   M L+ L YS   +++LL+    +++WYD   N+ S R V     P  + A + + S
Sbjct: 312 MSNLMFLRPLCYSKDREKMLLEVNDHKLVWYD--WNKTSVRTVKVKGGPRSFGAAMCVGS 369

Query: 65  LVKLNCGDSTE--LAQVKRKT 9
           LV L+ G   E  L + KRKT
Sbjct: 370 LVPLDDGGENEQKLKKEKRKT 390


>ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|355483439|gb|AES64642.1|
           F-box protein [Medicago truncatula]
          Length = 388

 Score =  160 bits (404), Expect = 5e-37
 Identities = 98/279 (35%), Positives = 151/279 (54%), Gaps = 8/279 (2%)
 Frame = -2

Query: 872 LASCNGLILLLTAKSLGSCVFETLSQPDPPNLDLVLMNPATRKHKLLPVSPIEYPVYYSK 693
           L SCNGL+ +    S G   F   + P   N ++   NP  RKH+++P  P+  P     
Sbjct: 89  LGSCNGLLAI----SNGEIAF---TNPYSAN-EIAFCNPTIRKHRIIPYLPLPIPSRSQS 140

Query: 692 TKCEFVSYGFGHDSVRDDYKVVRIAQFPDLV-----KNEVKVFSLKKNVWRRVQDFPYVL 528
                  +GFG DS+  DYK++RI+ F DL       + + +FS K N W+ + D PY+L
Sbjct: 141 DNIALCVHGFGFDSLSADYKLLRISWFVDLQHHTFDNSHLTLFSSKTNSWKTLPDMPYIL 200

Query: 527 YAT-AHGVFLDGVLHWLVT-KRSGSEAVVIASFDLGTEKYGSLPQP-RYSDMSDFMATLR 357
           Y T   GVF++  LHW++T K  G +  +IA+F+L  E +  +P P        F  ++ 
Sbjct: 201 YYTLTMGVFVENSLHWIMTPKLDGLQPCLIAAFNLSLEIFNEVPLPDEIISNESFKISIA 260

Query: 356 VVGGKLCLSCNYEMRYIDFWVMEKYGVKKSWSKILSVEQNVGIRFMQLKALAYSNSGKEV 177
           V+GG LCL  NY+   ID WVM++YG + SW K  ++ ++  + F  L+ L Y + G +V
Sbjct: 261 VLGGCLCLPVNYQTTKIDVWVMKEYGCRDSWCKHFTLVKSC-LDF--LRPLGYCSDGSKV 317

Query: 176 LLQQEAGRILWYDLELNEISKRFVIPNFWKAHVSLESLV 60
           LL+ +  ++ WYDL+  +IS    IPN     + + SLV
Sbjct: 318 LLEIDCKKLFWYDLKSEQISYVEGIPNLDDTMICVGSLV 356