BLASTX nr result

ID: Cnidium21_contig00025287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025287
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300003.1| predicted protein [Populus trichocarpa] gi|2...   206   7e-51
gb|ACR37723.1| unknown [Zea mays]                                     206   1e-50
ref|NP_001242201.1| uncharacterized protein LOC100780110 [Glycin...   204   2e-50
ref|XP_002313226.1| predicted protein [Populus trichocarpa] gi|2...   202   9e-50
ref|XP_002275144.1| PREDICTED: mitochondrial import inner membra...   202   1e-49

>ref|XP_002300003.1| predicted protein [Populus trichocarpa] gi|222847261|gb|EEE84808.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  206 bits (525), Expect = 7e-51
 Identities = 102/168 (60%), Positives = 117/168 (69%), Gaps = 2/168 (1%)
 Frame = +1

Query: 256 SSNSENEAIKLPSSLD--EPRVVEPMRLPTVEEVRGQDIWNNCAVRSVTSGVXXXXXXXX 429
           S+N+   A    +S D   P  ++P R+PT+EEVR QD+WNNCAVRSV SGV        
Sbjct: 11  SNNNGGAASSSSTSKDGETPTQIQPFRMPTIEEVRAQDVWNNCAVRSVASGVMGGGLGLF 70

Query: 430 XXXXXXXXDNPITQDEMTGRQQFVYTAKQMGRRSWNSCKTFAVMGFIFSATECVVEKVRA 609
                   DNPI QDEMTGRQQF+YTAKQMGRRSW+SCKTFA+MG +FSA ECV EK RA
Sbjct: 71  MGLFLGALDNPIMQDEMTGRQQFIYTAKQMGRRSWSSCKTFAIMGLVFSAAECVTEKARA 130

Query: 610 KHDMTNTVAAGCVTGGTLSAKGGPKXXXXXXXXXXXXSVVIEKFLERH 753
           KHD TNTV AGCVTGGT+SAKGGPK            SV+IEKFL+RH
Sbjct: 131 KHDTTNTVVAGCVTGGTMSAKGGPKAACVGCAGFAAFSVLIEKFLDRH 178


>gb|ACR37723.1| unknown [Zea mays]
          Length = 216

 Score =  206 bits (523), Expect = 1e-50
 Identities = 100/149 (67%), Positives = 112/149 (75%)
 Frame = -3

Query: 761 YHSCLSKNFSMTTENAAKPAHPMHAAFGPPFADNVPPVTHPAATVFVMSCFARTFSTTHS 582
           +  C SKNFS+ TENAA P HP H A GPPF    PPVT PA  V V+SCFARTFS  HS
Sbjct: 12  FQVCRSKNFSIATENAANPTHPKHVALGPPFTAKAPPVTQPATAVLVVSCFARTFSMVHS 71

Query: 581 VAEKIKPITAKVLQEFQLLRPICFAV*TNCCLPVISSCVMGLSNAPRNNPIASPRAPPIT 402
            AEKI+P+TAKVL    LL PICFAV T CCL VI S ++G S AP+N+PI++PR PP+T
Sbjct: 72  AAEKIRPMTAKVLALLILLLPICFAVYTICCLAVICSAIIGFSKAPKNSPISTPRPPPMT 131

Query: 401 PLVTLRTAQLFQMSCPRTSSTVGNRIGST 315
           PL TLRTAQLFQMSCP  SSTVG RIGST
Sbjct: 132 PLTTLRTAQLFQMSCPLISSTVGIRIGST 160


>ref|NP_001242201.1| uncharacterized protein LOC100780110 [Glycine max]
           gi|255636497|gb|ACU18587.1| unknown [Glycine max]
          Length = 170

 Score =  204 bits (520), Expect = 2e-50
 Identities = 103/168 (61%), Positives = 120/168 (71%)
 Frame = +1

Query: 253 SSSNSENEAIKLPSSLDEPRVVEPMRLPTVEEVRGQDIWNNCAVRSVTSGVXXXXXXXXX 432
           S+   EN ++   + L+ P++ EP+RLP+VEE+RGQDIWNNCAVRSV SGV         
Sbjct: 5   SAKGIENASLN-STQLENPQI-EPIRLPSVEEIRGQDIWNNCAVRSVVSGVMGGGLGIFM 62

Query: 433 XXXXXXXDNPITQDEMTGRQQFVYTAKQMGRRSWNSCKTFAVMGFIFSATECVVEKVRAK 612
                  DNP+ Q+EMTGRQQF+Y AKQMGRRSW+S K FAVMGFIFSA ECVVEK RAK
Sbjct: 63  GLFLGALDNPLMQEEMTGRQQFIYRAKQMGRRSWSSAKAFAVMGFIFSAAECVVEKARAK 122

Query: 613 HDMTNTVAAGCVTGGTLSAKGGPKXXXXXXXXXXXXSVVIEKFLERHE 756
           HD+TNTV AGC TGG +SAKGGPK            SVVIEKFLERH+
Sbjct: 123 HDITNTVVAGCATGGAISAKGGPKAACAGCAGFAAFSVVIEKFLERHQ 170


>ref|XP_002313226.1| predicted protein [Populus trichocarpa] gi|222849634|gb|EEE87181.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  202 bits (515), Expect = 9e-50
 Identities = 100/172 (58%), Positives = 116/172 (67%), Gaps = 2/172 (1%)
 Frame = +1

Query: 244 GKMSSSNSENEAIKLPSSL--DEPRVVEPMRLPTVEEVRGQDIWNNCAVRSVTSGVXXXX 417
           G  S+ N  + A    +S   + P  ++P R+PT+EEVR Q++WNNCAVRSV SGV    
Sbjct: 8   GSESNINGGDAAASSSTSKVGETPTQIQPFRMPTIEEVRAQEVWNNCAVRSVASGVMGGG 67

Query: 418 XXXXXXXXXXXXDNPITQDEMTGRQQFVYTAKQMGRRSWNSCKTFAVMGFIFSATECVVE 597
                       DNPI QDEMTGRQQF+YTAKQMGRRSWNSCK FA+MG +FSA ECV E
Sbjct: 68  LGLFMGLFLGALDNPIMQDEMTGRQQFIYTAKQMGRRSWNSCKAFAIMGLVFSAAECVAE 127

Query: 598 KVRAKHDMTNTVAAGCVTGGTLSAKGGPKXXXXXXXXXXXXSVVIEKFLERH 753
           K RAKHD TNTV AGCVTGG +SAKGGPK            SV+IEKFL+RH
Sbjct: 128 KARAKHDTTNTVVAGCVTGGAMSAKGGPKAACFGCAGFAAFSVLIEKFLDRH 179


>ref|XP_002275144.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           tim22 [Vitis vinifera] gi|297745845|emb|CBI15901.3|
           unnamed protein product [Vitis vinifera]
          Length = 170

 Score =  202 bits (514), Expect = 1e-49
 Identities = 105/169 (62%), Positives = 116/169 (68%), Gaps = 2/169 (1%)
 Frame = +1

Query: 256 SSNSENEAIKLPSSLDEPRV--VEPMRLPTVEEVRGQDIWNNCAVRSVTSGVXXXXXXXX 429
           SSNS +E     SS  E     +EP+R+PTVEE+RGQDIWNNCAVRSV SGV        
Sbjct: 2   SSNSGSEFTNDSSSSTEAEKPQIEPIRMPTVEEIRGQDIWNNCAVRSVASGVMGGGLGLL 61

Query: 430 XXXXXXXXDNPITQDEMTGRQQFVYTAKQMGRRSWNSCKTFAVMGFIFSATECVVEKVRA 609
                   DNPI Q+EMT RQQF+YTAKQMG RSW S KTFAVMG IFSA ECVVEK RA
Sbjct: 62  MGLFLGALDNPIMQEEMTARQQFIYTAKQMGSRSWGSAKTFAVMGLIFSAAECVVEKARA 121

Query: 610 KHDMTNTVAAGCVTGGTLSAKGGPKXXXXXXXXXXXXSVVIEKFLERHE 756
           KHD TNTV AGCVTGG +SAKGGPK            SV+IEKFL+RH+
Sbjct: 122 KHDTTNTVVAGCVTGGAISAKGGPKAACVGCAGFATFSVLIEKFLDRHD 170


Top