BLASTX nr result

ID: Cnidium21_contig00025281 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00025281
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]             101   7e-20
dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris] ...   100   1e-19
ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group] g...    99   4e-19
dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]     98   6e-19
dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]     98   6e-19

>gb|ACX71299.1| RNA-binding protein RZ-1 [Capsicum annuum]
          Length = 202

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/75 (62%), Positives = 59/75 (78%)
 Frame = +3

Query: 153 MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKXXXXXXXXXXXXXDEEKA 332
           M++++EYRCFIGNLSWSTSDR LKDAF+KFG L+DAKVV+DK             D+++A
Sbjct: 1   MSEEDEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDDKRA 60

Query: 333 MEDAIESMNGIDLGG 377
           MEDAIE+MNG+DL G
Sbjct: 61  MEDAIEAMNGMDLDG 75


>dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
           gi|1435062|dbj|BAA06012.1| RNA binding protein RZ-1
           [Nicotiana sylvestris]
          Length = 209

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = +3

Query: 153 MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKXXXXXXXXXXXXXDEEKA 332
           MAD +EYRCFIGNLSWSTSDR LKDAF+KFG L+DAKVV+DK             DE++A
Sbjct: 1   MAD-DEYRCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRA 59

Query: 333 MEDAIESMNGIDLGG 377
           MEDAIE+MNG+DL G
Sbjct: 60  MEDAIEAMNGVDLDG 74


>ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
           gi|40714682|gb|AAR88588.1| putative RNA binding protein
           [Oryza sativa Japonica Group]
           gi|108711961|gb|ABF99756.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711962|gb|ABF99757.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711963|gb|ABF99758.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108711964|gb|ABF99759.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa
           Japonica Group] gi|125546344|gb|EAY92483.1| hypothetical
           protein OsI_14220 [Oryza sativa Indica Group]
           gi|125588547|gb|EAZ29211.1| hypothetical protein
           OsJ_13272 [Oryza sativa Japonica Group]
           gi|215695067|dbj|BAG90258.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215715212|dbj|BAG94963.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764998|dbj|BAG86695.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 205

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/75 (65%), Positives = 53/75 (70%)
 Frame = +3

Query: 153 MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKXXXXXXXXXXXXXDEEKA 332
           MAD EEYRCFIGNLSWST+D  LKDAF KFG L +AKVV DK             DE+KA
Sbjct: 1   MADVEEYRCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKA 60

Query: 333 MEDAIESMNGIDLGG 377
           MEDAIE MNG+DL G
Sbjct: 61  MEDAIEGMNGLDLDG 75


>dbj|BAJ95525.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 226

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = +3

Query: 153 MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKXXXXXXXXXXXXXDEEKA 332
           MAD++EYRCF+GNLSWST+D  LKDAF K+G++ +AKVVMDK             DE+KA
Sbjct: 1   MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 60

Query: 333 MEDAIESMNGIDLGG 377
           ME+AIE MNG+DL G
Sbjct: 61  MEEAIEDMNGLDLEG 75


>dbj|BAK05765.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 262

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = +3

Query: 153 MADQEEYRCFIGNLSWSTSDRDLKDAFKKFGRLLDAKVVMDKXXXXXXXXXXXXXDEEKA 332
           MAD++EYRCF+GNLSWST+D  LKDAF K+G++ +AKVVMDK             DE+KA
Sbjct: 37  MADEDEYRCFVGNLSWSTTDESLKDAFSKYGKVTEAKVVMDKFSGRSRGFAFVTFDEKKA 96

Query: 333 MEDAIESMNGIDLGG 377
           ME+AIE MNG+DL G
Sbjct: 97  MEEAIEDMNGLDLEG 111


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